RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 SPATA31B1PQ5VZV4 182 aa11.16□□□□□ -0.62
VAPA-201ENST00000340541 ZNF709Q8N972 641 aa11.16□□□□□ -0.62
VAPA-201ENST00000340541 Q8NAQ8 132 aa11.16□□□□□ -0.62
VAPA-201ENST00000340541 C11orf68Q9H3H3 251 aaKnown RBP11.16□□□□□ -0.62
VAPA-201ENST00000340541 RNF24Q9Y225 148 aa11.16□□□□□ -0.62
VAPA-201ENST00000340541 TRAV5A0A0B4J249 113 aa11.15□□□□□ -0.62
VAPA-201ENST00000340541 IGLC2P0DOY2 106 aa11.15□□□□□ -0.62
VAPA-201ENST00000340541 HLA-DMBP28068 263 aa11.15□□□□□ -0.62
VAPA-201ENST00000340541 NUTF2P61970 127 aaKnown RBP11.15□□□□□ -0.62
VAPA-201ENST00000340541 FAM78BQ5VT40 261 aa11.15□□□□□ -0.62
VAPA-201ENST00000340541 EBLN2Q6P2I7 272 aa11.15□□□□□ -0.62
VAPA-201ENST00000340541 CEMP1Q6PRD7 247 aaPredicted RBP11.15□□□□□ -0.62
VAPA-201ENST00000340541 OR1L4Q8NGR5 311 aa11.15□□□□□ -0.62
VAPA-201ENST00000340541 PFDN5Q99471 154 aa11.15□□□□□ -0.62
VAPA-201ENST00000340541 WDR61Q9GZS3 305 aaKnown RBP11.15□□□□□ -0.62
VAPA-201ENST00000340541 XCL2Q9UBD3 114 aa11.15□□□□□ -0.62
VAPA-201ENST00000340541 HSPB11Q9Y547 144 aa11.15□□□□□ -0.62
VAPA-201ENST00000340541 CXorf65A6NEN9 183 aa11.14□□□□□ -0.63
VAPA-201ENST00000340541 H3BQ15 152 aa11.14□□□□□ -0.63
VAPA-201ENST00000340541 SNRPCP09234 159 aaKnown RBP11.14□□□□□ -0.63
VAPA-201ENST00000340541 RPL12P30050 165 aaKnown RBP11.14□□□□□ -0.63
VAPA-201ENST00000340541 GCSAMLQ5JQS6 135 aa11.14□□□□□ -0.63
VAPA-201ENST00000340541 AMTNQ6UX39 209 aa11.14□□□□□ -0.63
VAPA-201ENST00000340541 BPIFA4PQ86YQ2 179 aa11.14□□□□□ -0.63
VAPA-201ENST00000340541 OR4B1Q8NGF8 309 aa11.14□□□□□ -0.63
VAPA-201ENST00000340541 C1QTNF4Q9BXJ3 329 aa11.14□□□□□ -0.63
VAPA-201ENST00000340541 SLC35B3Q9H1N7 401 aa11.14□□□□□ -0.63
VAPA-201ENST00000340541 MED28Q9H204 178 aa11.14□□□□□ -0.63
VAPA-201ENST00000340541 KLK5Q9Y337 293 aaPredicted RBP11.14□□□□□ -0.63
VAPA-201ENST00000340541 IGHV4-28A0A0C4DH34 117 aa11.13□□□□□ -0.63
VAPA-201ENST00000340541 SLC17A3O00476 420 aa11.13□□□□□ -0.63
VAPA-201ENST00000340541 DEFB4AO15263 64 aa11.13□□□□□ -0.63
VAPA-201ENST00000340541 RBMY1A1P0DJD3 496 aaKnown RBP11.13□□□□□ -0.63
VAPA-201ENST00000340541 RBMY1CP0DJD4 496 aa11.13□□□□□ -0.63
VAPA-201ENST00000340541 CXCL2P19875 107 aa11.13□□□□□ -0.63
VAPA-201ENST00000340541 FXYD7P58549 80 aa11.13□□□□□ -0.63
VAPA-201ENST00000340541 OXA1LQ15070 435 aa11.13□□□□□ -0.63
VAPA-201ENST00000340541 RBMY1FQ15415 496 aaKnown RBP11.13□□□□□ -0.63
VAPA-201ENST00000340541 PSG3Q16557 428 aa11.13□□□□□ -0.63
VAPA-201ENST00000340541 RGS21Q2M5E4 152 aa11.13□□□□□ -0.63
VAPA-201ENST00000340541 LCN15Q6UWW0 184 aa11.13□□□□□ -0.63
VAPA-201ENST00000340541 ATP5SQ99766 215 aa11.13□□□□□ -0.63
VAPA-201ENST00000340541 HRH4Q9H3N8 390 aa11.13□□□□□ -0.63
VAPA-201ENST00000340541 ZNF331Q9NQX6 463 aaPredicted RBP11.13□□□□□ -0.63
VAPA-201ENST00000340541 HYDINQ4G0P3 5121 aa11.13□□□□□ -0.63
VAPA-201ENST00000340541 H3BTX0 84 aa11.12□□□□□ -0.63
VAPA-201ENST00000340541 LY6G6CO95867 125 aa11.12□□□□□ -0.63
VAPA-201ENST00000340541 ZNF705DP0CH99 300 aaPredicted RBP11.12□□□□□ -0.63
VAPA-201ENST00000340541 ZNF705BP0CI00 300 aaPredicted RBP11.12□□□□□ -0.63
VAPA-201ENST00000340541 MIFP14174 115 aa11.12□□□□□ -0.63
VAPA-201ENST00000340541 CNN1P51911 297 aaKnown RBP11.12□□□□□ -0.63
VAPA-201ENST00000340541 PSG9Q00887 426 aa11.12□□□□□ -0.63
VAPA-201ENST00000340541 ZNF705AQ6ZN79 300 aaPredicted RBP11.12□□□□□ -0.63
VAPA-201ENST00000340541 SAT2Q96F10 170 aaPredicted RBP11.12□□□□□ -0.63
VAPA-201ENST00000340541 ZNF705FA8MVS1 300 aaPredicted RBP11.11□□□□□ -0.63
VAPA-201ENST00000340541 PMS2P11Q13670 270 aa11.11□□□□□ -0.63
VAPA-201ENST00000340541 Q5BKY6 102 aa11.11□□□□□ -0.63
VAPA-201ENST00000340541 ZNF738Q8NE65 137 aa11.11□□□□□ -0.63
VAPA-201ENST00000340541 SLC50A1Q9BRV3 221 aa11.11□□□□□ -0.63
VAPA-201ENST00000340541 SMIM3Q9BZL3 60 aa11.11□□□□□ -0.63
VAPA-201ENST00000340541 WFDC1Q9HC57 220 aa11.11□□□□□ -0.63
VAPA-201ENST00000340541 ZNF586Q9NXT0 402 aa11.11□□□□□ -0.63
VAPA-201ENST00000340541 PRB4P10163 310 aaPredicted RBP11.1□□□□□ -0.63
VAPA-201ENST00000340541 PLECQ15149 4684 aaKnown RBP11.1□□□□□ -0.63
VAPA-201ENST00000340541 OR8A1Q8NGG7 326 aa11.1□□□□□ -0.63
VAPA-201ENST00000340541 LRRC20Q8TCA0 184 aa11.1□□□□□ -0.63
VAPA-201ENST00000340541 FAM167A-AS1Q96KT0 104 aa11.1□□□□□ -0.63
VAPA-201ENST00000340541 MFFQ9GZY8 342 aa11.1□□□□□ -0.63
VAPA-201ENST00000340541 TMEM14CQ9P0S9 112 aa11.1□□□□□ -0.63
VAPA-201ENST00000340541 DUSP14O95147 198 aaKnown RBP11.09□□□□□ -0.63
VAPA-201ENST00000340541 GIPP09681 153 aaPredicted RBP11.09□□□□□ -0.63
VAPA-201ENST00000340541 NANOS2P60321 138 aaKnown RBP11.09□□□□□ -0.63
VAPA-201ENST00000340541 GUK1Q16774 197 aa11.09□□□□□ -0.63
VAPA-201ENST00000340541 MIR17HGQ75NE6 70 aa11.09□□□□□ -0.63
VAPA-201ENST00000340541 C1orf158Q8N1D5 194 aa11.09□□□□□ -0.63
VAPA-201ENST00000340541 C11orf45Q8TAV5 145 aa11.09□□□□□ -0.63
VAPA-201ENST00000340541 RPUSD4Q96CM3 377 aaKnown RBP11.09□□□□□ -0.63
VAPA-201ENST00000340541 NEU1Q99519 415 aa11.09□□□□□ -0.63
VAPA-201ENST00000340541 SLC25A2Q9BXI2 301 aa11.09□□□□□ -0.63
VAPA-201ENST00000340541 PARD6GQ9BYG4 376 aaPredicted RBP11.09□□□□□ -0.63
VAPA-201ENST00000340541 KCNIP2Q9NS61 270 aa11.09□□□□□ -0.63
VAPA-201ENST00000340541 PRAC2D3DTV9 90 aa11.08□□□□□ -0.64
VAPA-201ENST00000340541 CRXO43186 299 aaPredicted RBP11.08□□□□□ -0.64
VAPA-201ENST00000340541 ZNF253O75346 499 aa11.08□□□□□ -0.64
VAPA-201ENST00000340541 NDUFB4O95168 129 aa11.08□□□□□ -0.64
VAPA-201ENST00000340541 PYYP10082 97 aa11.08□□□□□ -0.64
VAPA-201ENST00000340541 RFNGQ9Y644 331 aa11.08□□□□□ -0.64
VAPA-201ENST00000340541 ALMS1Q8TCU4 4167 aa11.07□□□□□ -0.64
VAPA-201ENST00000340541 TRBV19A0A075B6N1 114 aa11.07□□□□□ -0.64
VAPA-201ENST00000340541 C17orf112F2Z3M2 114 aa11.07□□□□□ -0.64
VAPA-201ENST00000340541 M0R2Z0 102 aa11.07□□□□□ -0.64
VAPA-201ENST00000340541 HIST1H1AQ02539 215 aaPredicted RBP11.07□□□□□ -0.64
VAPA-201ENST00000340541 SPINK13Q1W4C9 94 aa11.07□□□□□ -0.64
VAPA-201ENST00000340541 ASB13Q8WXK3 278 aa11.07□□□□□ -0.64
VAPA-201ENST00000340541 IGF2BP2-AS1Q96M15 143 aa11.07□□□□□ -0.64
VAPA-201ENST00000340541 AQP10Q96PS8 301 aa11.07□□□□□ -0.64
VAPA-201ENST00000340541 G3V3Q6 166 aa11.06□□□□□ -0.64
VAPA-201ENST00000340541 IFNA5P01569 189 aa11.06□□□□□ -0.64
VAPA-201ENST00000340541 HIST1H1EP10412 219 aaKnown RBP11.06□□□□□ -0.64
VAPA-201ENST00000340541 LGALS9CQ6DKI2 356 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms