RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 KLF5Q13887 457 aaPredicted RBP11.44□□□□□ -0.58
CPSF7-201ENST00000340437 MRPL52Q86TS9 123 aaKnown RBP11.44□□□□□ -0.58
CPSF7-201ENST00000340437 NAA38Q9BRA0 125 aaKnown RBP11.44□□□□□ -0.58
CPSF7-201ENST00000340437 ABCA12Q86UK0 2595 aa11.44□□□□□ -0.58
CPSF7-201ENST00000340437 OR2J3O76001 311 aa11.44□□□□□ -0.58
CPSF7-201ENST00000340437 LTAP01374 205 aa11.44□□□□□ -0.58
CPSF7-201ENST00000340437 C8orf49Q96NF6 230 aa11.44□□□□□ -0.58
CPSF7-201ENST00000340437 MLST8Q9BVC4 326 aa11.44□□□□□ -0.58
CPSF7-201ENST00000340437 NCBP2LA6PVI3 153 aaKnown RBP11.44□□□□□ -0.58
CPSF7-201ENST00000340437 OR5AL1P0C617 328 aa11.44□□□□□ -0.58
CPSF7-201ENST00000340437 FAM106CPP0CH98 169 aa11.44□□□□□ -0.58
CPSF7-201ENST00000340437 MRGPRG-AS1Q2M3A8 158 aa11.44□□□□□ -0.58
CPSF7-201ENST00000340437 FAM106AQ4KMX7 169 aa11.44□□□□□ -0.58
CPSF7-201ENST00000340437 FBLN7Q53RD9 439 aa11.44□□□□□ -0.58
CPSF7-201ENST00000340437 ATP5L2Q7Z4Y8 100 aa11.44□□□□□ -0.58
CPSF7-201ENST00000340437 F11RQ9Y624 299 aaKnown RBP11.44□□□□□ -0.58
CPSF7-201ENST00000340437 OR2T8A6NH00 312 aa11.43□□□□□ -0.58
CPSF7-201ENST00000340437 A0A1B0GUT8 65 aa11.43□□□□□ -0.58
CPSF7-201ENST00000340437 TIMM23O14925 209 aa11.43□□□□□ -0.58
CPSF7-201ENST00000340437 IGLC1P0CG04 106 aa11.43□□□□□ -0.58
CPSF7-201ENST00000340437 SFTPCP11686 197 aa11.43□□□□□ -0.58
CPSF7-201ENST00000340437 KLRD1Q13241 179 aa11.43□□□□□ -0.58
CPSF7-201ENST00000340437 MUC15Q8N387 334 aa11.43□□□□□ -0.58
CPSF7-201ENST00000340437 MRPS16Q9Y3D3 137 aaKnown RBP11.43□□□□□ -0.58
CPSF7-201ENST00000340437 SMKR1H3BMG3 65 aa11.42□□□□□ -0.58
CPSF7-201ENST00000340437 CEACAM4O75871 244 aa11.42□□□□□ -0.58
CPSF7-201ENST00000340437 BPIFA4PQ86YQ2 179 aa11.42□□□□□ -0.58
CPSF7-201ENST00000340437 IGHV3OR16-13A0A075B7E8 117 aa11.42□□□□□ -0.58
CPSF7-201ENST00000340437 IGHV3-74A0A0B4J1X5 117 aa11.42□□□□□ -0.58
CPSF7-201ENST00000340437 TMEM213A2RRL7 107 aa11.42□□□□□ -0.58
CPSF7-201ENST00000340437 GNG7O60262 68 aa11.42□□□□□ -0.58
CPSF7-201ENST00000340437 CT45A10P0DMU9 189 aa11.42□□□□□ -0.58
CPSF7-201ENST00000340437 UBE2V1Q13404 147 aa11.42□□□□□ -0.58
CPSF7-201ENST00000340437 NGBQ9NPG2 151 aa11.42□□□□□ -0.58
CPSF7-201ENST00000340437 OTORQ9NRC9 128 aa11.42□□□□□ -0.58
CPSF7-201ENST00000340437 AP5S1Q9NUS5 200 aa11.42□□□□□ -0.58
CPSF7-201ENST00000340437 PSG8Q9UQ74 426 aa11.42□□□□□ -0.58
CPSF7-201ENST00000340437 C19orf71A6NCJ1 209 aa11.41□□□□□ -0.58
CPSF7-201ENST00000340437 BUB1B-PAK6H3BSN5 160 aa11.41□□□□□ -0.58
CPSF7-201ENST00000340437 KLF12Q9Y4X4 402 aa11.41□□□□□ -0.58
CPSF7-201ENST00000340437 CCL21O00585 134 aa11.41□□□□□ -0.58
CPSF7-201ENST00000340437 IFI27P40305 119 aaPredicted RBP11.41□□□□□ -0.58
CPSF7-201ENST00000340437 NHLH1Q02575 133 aa11.41□□□□□ -0.58
CPSF7-201ENST00000340437 FAM120AOSQ5T036 256 aa11.41□□□□□ -0.58
CPSF7-201ENST00000340437 ASCL5Q7RTU5 278 aa11.41□□□□□ -0.58
CPSF7-201ENST00000340437 PRSS22Q9GZN4 317 aa11.41□□□□□ -0.58
CPSF7-201ENST00000340437 NCR2O95944 276 aa11.41□□□□□ -0.58
CPSF7-201ENST00000340437 LIPFP07098 398 aa11.41□□□□□ -0.58
CPSF7-201ENST00000340437 FOXE3Q13461 319 aa11.41□□□□□ -0.58
CPSF7-201ENST00000340437 Q8TAT8 98 aa11.41□□□□□ -0.58
CPSF7-201ENST00000340437 ORAOV1Q8WV07 137 aa11.41□□□□□ -0.58
CPSF7-201ENST00000340437 EPG5Q9HCE0 2579 aa11.41□□□□□ -0.58
CPSF7-201ENST00000340437 IGHV3OR16-10A0A075B7F0 116 aa11.4□□□□□ -0.58
CPSF7-201ENST00000340437 IGKV2-40A0A087WW87 121 aaPredicted RBP11.4□□□□□ -0.58
CPSF7-201ENST00000340437 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.4□□□□□ -0.58
CPSF7-201ENST00000340437 K7EQM0 130 aa11.4□□□□□ -0.58
CPSF7-201ENST00000340437 IGKV1-17P01599 117 aa11.4□□□□□ -0.58
CPSF7-201ENST00000340437 IGKV2D-40P01614 121 aaPredicted RBP11.4□□□□□ -0.58
CPSF7-201ENST00000340437 LOXL1Q08397 574 aaPredicted RBP11.4□□□□□ -0.58
CPSF7-201ENST00000340437 AMMECR1LQ6DCA0 310 aa11.4□□□□□ -0.58
CPSF7-201ENST00000340437 TEX22C9J3V5 150 aa11.4□□□□□ -0.58
CPSF7-201ENST00000340437 HLA-DRB1P01911 266 aa11.4□□□□□ -0.58
CPSF7-201ENST00000340437 CRYGCP07315 174 aa11.4□□□□□ -0.58
CPSF7-201ENST00000340437 GRNP28799 593 aaKnown RBP11.4□□□□□ -0.58
CPSF7-201ENST00000340437 RIGQ13278 110 aa11.4□□□□□ -0.58
CPSF7-201ENST00000340437 DLX6P56179 175 aa11.4□□□□□ -0.58
CPSF7-201ENST00000340437 FAM162BQ5T6X4 162 aa11.4□□□□□ -0.58
CPSF7-201ENST00000340437 IGFL3Q6UXB1 125 aa11.39□□□□□ -0.59
CPSF7-201ENST00000340437 AMN1Q8IY45 258 aa11.39□□□□□ -0.59
CPSF7-201ENST00000340437 IGHV3-66A0A0C4DH42 116 aa11.39□□□□□ -0.59
CPSF7-201ENST00000340437 PPIFP30405 207 aaKnown RBP11.39□□□□□ -0.59
CPSF7-201ENST00000340437 C18orf15Q96N68 181 aa11.39□□□□□ -0.59
CPSF7-201ENST00000340437 D6R8Y8 96 aa11.39□□□□□ -0.59
CPSF7-201ENST00000340437 CD3EP07766 207 aa11.39□□□□□ -0.59
CPSF7-201ENST00000340437 LYZL1Q6UWQ5 148 aa11.39□□□□□ -0.59
CPSF7-201ENST00000340437 LINC00311Q8N616 119 aa11.39□□□□□ -0.59
CPSF7-201ENST00000340437 CHCHD1Q96BP2 118 aaKnown RBP11.39□□□□□ -0.59
CPSF7-201ENST00000340437 RNF125Q96EQ8 232 aa11.39□□□□□ -0.59
CPSF7-201ENST00000340437 HSPB8Q9UJY1 196 aa11.39□□□□□ -0.59
CPSF7-201ENST00000340437 RBPJQ06330 500 aa11.38□□□□□ -0.59
CPSF7-201ENST00000340437 TM4SF20Q53R12 229 aa11.38□□□□□ -0.59
CPSF7-201ENST00000340437 DCHS2Q6V1P9 2916 aa11.38□□□□□ -0.59
CPSF7-201ENST00000340437 SHISA9B4DS77 424 aa11.38□□□□□ -0.59
CPSF7-201ENST00000340437 C3orf36Q3SXR2 165 aa11.38□□□□□ -0.59
CPSF7-201ENST00000340437 AAMDCQ9H7C9 122 aa11.38□□□□□ -0.59
CPSF7-201ENST00000340437 IGKV3-7A0A075B6H7 116 aa11.38□□□□□ -0.59
CPSF7-201ENST00000340437 NPIPB5A8MRT5 1133 aa11.38□□□□□ -0.59
CPSF7-201ENST00000340437 RAB37Q96AX2 223 aa11.38□□□□□ -0.59
CPSF7-201ENST00000340437 VPS25Q9BRG1 176 aa11.38□□□□□ -0.59
CPSF7-201ENST00000340437 TRBV19A0A075B6N1 114 aa11.37□□□□□ -0.59
CPSF7-201ENST00000340437 IGHV3-49A0A0A0MS15 119 aa11.37□□□□□ -0.59
CPSF7-201ENST00000340437 INS-IGF2F8WCM5 200 aa11.37□□□□□ -0.59
CPSF7-201ENST00000340437 IGLV2-11P01706 119 aa11.37□□□□□ -0.59
CPSF7-201ENST00000340437 HLA-DMBP28068 263 aa11.37□□□□□ -0.59
CPSF7-201ENST00000340437 LY6DQ14210 128 aa11.37□□□□□ -0.59
CPSF7-201ENST00000340437 TMEM75Q8N9X5 138 aa11.37□□□□□ -0.59
CPSF7-201ENST00000340437 ST20Q9HBF5 79 aa11.37□□□□□ -0.59
CPSF7-201ENST00000340437 TMEM189A5PLL7 270 aa11.37□□□□□ -0.59
CPSF7-201ENST00000340437 I3L2K1 104 aa11.37□□□□□ -0.59
CPSF7-201ENST00000340437 S100A7P31151 101 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms