RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 SRSF2Q01130 221 aaKnown RBP10.14□□□□□ -0.79
LIN54-201ENST00000340417 SRSF9Q13242 221 aaKnown RBP eCLIP10.14□□□□□ -0.79
LIN54-201ENST00000340417 RNF182Q8N6D2 247 aa10.14□□□□□ -0.79
LIN54-201ENST00000340417 CD28P10747 220 aa10.14□□□□□ -0.79
LIN54-201ENST00000340417 PIFOQ8TCI5 191 aa10.14□□□□□ -0.79
LIN54-201ENST00000340417 DSCAMO60469 2012 aa10.14□□□□□ -0.79
LIN54-201ENST00000340417 A8MXK9 166 aa10.14□□□□□ -0.79
LIN54-201ENST00000340417 SMR3AQ99954 134 aa10.14□□□□□ -0.79
LIN54-201ENST00000340417 RNF126Q9BV68 326 aa10.14□□□□□ -0.79
LIN54-201ENST00000340417 ADARB2-AS1A8MUL3 147 aa10.14□□□□□ -0.79
LIN54-201ENST00000340417 C4orf3Q8WVX3 66 aa10.14□□□□□ -0.79
LIN54-201ENST00000340417 TMEM190Q8WZ59 177 aa10.14□□□□□ -0.79
LIN54-201ENST00000340417 PRELID3AQ96N28 172 aa10.14□□□□□ -0.79
LIN54-201ENST00000340417 HSPB9Q9BQS6 159 aa10.14□□□□□ -0.79
LIN54-201ENST00000340417 CSPG4Q6UVK1 2322 aa10.13□□□□□ -0.79
LIN54-201ENST00000340417 MBD6Q96DN6 1003 aa10.13□□□□□ -0.79
LIN54-201ENST00000340417 A6NDX4 124 aa10.13□□□□□ -0.79
LIN54-201ENST00000340417 BTCP35070 178 aa10.13□□□□□ -0.79
LIN54-201ENST00000340417 WT1-ASQ06250 92 aa10.13□□□□□ -0.79
LIN54-201ENST00000340417 Q8N9W7 124 aa10.13□□□□□ -0.79
LIN54-201ENST00000340417 IGHV4OR15-8A0A075B7B6 117 aa10.13□□□□□ -0.79
LIN54-201ENST00000340417 A0A087WW49 117 aa10.13□□□□□ -0.79
LIN54-201ENST00000340417 VAMP8Q9BV40 100 aa10.13□□□□□ -0.79
LIN54-201ENST00000340417 ERCC8Q13216 396 aa10.13□□□□□ -0.79
LIN54-201ENST00000340417 LY6G6FQ5SQ64 297 aa10.13□□□□□ -0.79
LIN54-201ENST00000340417 Q6ZRM9 215 aa10.13□□□□□ -0.79
LIN54-201ENST00000340417 GAGE12BA1L429 117 aa10.13□□□□□ -0.79
LIN54-201ENST00000340417 GAGE7O76087 117 aa10.13□□□□□ -0.79
LIN54-201ENST00000340417 GAGE12FP0CL80 117 aa10.13□□□□□ -0.79
LIN54-201ENST00000340417 GAGE12GP0CL81 117 aa10.13□□□□□ -0.79
LIN54-201ENST00000340417 GAGE12IP0CL82 117 aa10.13□□□□□ -0.79
LIN54-201ENST00000340417 FNDC10F2Z333 226 aa10.12□□□□□ -0.79
LIN54-201ENST00000340417 PAX9P55771 341 aa10.12□□□□□ -0.79
LIN54-201ENST00000340417 CIRBPQ14011 172 aaKnown RBP10.12□□□□□ -0.79
LIN54-201ENST00000340417 LYPD1Q8N2G4 141 aa10.12□□□□□ -0.79
LIN54-201ENST00000340417 SMPXQ9UHP9 88 aa10.12□□□□□ -0.79
LIN54-201ENST00000340417 ZNF506Q5JVG8 444 aa10.12□□□□□ -0.79
LIN54-201ENST00000340417 HAPLN4Q86UW8 402 aa10.12□□□□□ -0.79
LIN54-201ENST00000340417 Q8NFD4 153 aa10.12□□□□□ -0.79
LIN54-201ENST00000340417 SPAG8Q99932 426 aaPredicted RBP10.12□□□□□ -0.79
LIN54-201ENST00000340417 SEPSECSQ9HD40 501 aaKnown RBP10.12□□□□□ -0.79
LIN54-201ENST00000340417 SRCAPQ6ZRS2 3230 aa10.12□□□□□ -0.79
LIN54-201ENST00000340417 TRAV9-2A0A087WT02 112 aa10.12□□□□□ -0.79
LIN54-201ENST00000340417 LGALS3P17931 250 aaKnown RBP10.11□□□□□ -0.79
LIN54-201ENST00000340417 CFPP27918 469 aa10.11□□□□□ -0.79
LIN54-201ENST00000340417 A0A1B0GW15 77 aa10.11□□□□□ -0.79
LIN54-201ENST00000340417 INSL3P51460 131 aa10.11□□□□□ -0.79
LIN54-201ENST00000340417 MRPL18Q9H0U6 180 aaKnown RBP10.11□□□□□ -0.79
LIN54-201ENST00000340417 KLK9Q9UKQ9 250 aa10.11□□□□□ -0.79
LIN54-201ENST00000340417 F2Z2F3 143 aa10.11□□□□□ -0.79
LIN54-201ENST00000340417 RPL13AP40429 203 aaKnown RBP10.11□□□□□ -0.79
LIN54-201ENST00000340417 TMEM136Q6ZRR5 245 aa10.11□□□□□ -0.79
LIN54-201ENST00000340417 PUSL1Q8N0Z8 303 aaKnown RBP10.11□□□□□ -0.79
LIN54-201ENST00000340417 H3BRM9 83 aa10.11□□□□□ -0.79
LIN54-201ENST00000340417 CCL20P78556 96 aa10.11□□□□□ -0.79
LIN54-201ENST00000340417 AJUBAQ96IF1 538 aa10.11□□□□□ -0.79
LIN54-201ENST00000340417 SLC17A3O00476 420 aa10.1□□□□□ -0.79
LIN54-201ENST00000340417 ATRXP46100 2492 aa10.1□□□□□ -0.79
LIN54-201ENST00000340417 SRIP30626 198 aa10.1□□□□□ -0.79
LIN54-201ENST00000340417 TMEM70Q9BUB7 260 aa10.1□□□□□ -0.79
LIN54-201ENST00000340417 TCRAP04437 139 aa10.1□□□□□ -0.79
LIN54-201ENST00000340417 PSMB2P49721 201 aa10.1□□□□□ -0.79
LIN54-201ENST00000340417 RPP25LQ8N5L8 163 aaKnown RBP10.1□□□□□ -0.79
LIN54-201ENST00000340417 H0YIZ8 118 aa10.1□□□□□ -0.79
LIN54-201ENST00000340417 IGHG2P01859 326 aa10.1□□□□□ -0.79
LIN54-201ENST00000340417 TCTAP57738 103 aa10.1□□□□□ -0.79
LIN54-201ENST00000340417 PDE6HQ13956 83 aa10.1□□□□□ -0.79
LIN54-201ENST00000340417 AZU1P20160 251 aa10.09□□□□□ -0.79
LIN54-201ENST00000340417 CDKN1BP46527 198 aa10.09□□□□□ -0.79
LIN54-201ENST00000340417 TRAV12-2A0A075B6T6 113 aa10.09□□□□□ -0.79
LIN54-201ENST00000340417 STAG3L2P0CL84 134 aa10.09□□□□□ -0.79
LIN54-201ENST00000340417 STAG3L3P0CL85 134 aa10.09□□□□□ -0.79
LIN54-201ENST00000340417 IL17DQ8TAD2 202 aa10.09□□□□□ -0.79
LIN54-201ENST00000340417 VSIRQ9H7M9 311 aa10.09□□□□□ -0.79
LIN54-201ENST00000340417 WFDC1Q9HC57 220 aa10.09□□□□□ -0.79
LIN54-201ENST00000340417 KLK5Q9Y337 293 aaPredicted RBP10.09□□□□□ -0.79
LIN54-201ENST00000340417 RNF222A6NCQ9 220 aa10.09□□□□□ -0.79
LIN54-201ENST00000340417 IFI27P40305 119 aaPredicted RBP10.09□□□□□ -0.79
LIN54-201ENST00000340417 KIAA1644Q3SXP7 199 aa10.09□□□□□ -0.79
LIN54-201ENST00000340417 TMEM89A2RUT3 159 aa10.09□□□□□ -0.79
LIN54-201ENST00000340417 C7orf71A4D174 169 aa10.09□□□□□ -0.79
LIN54-201ENST00000340417 FAM90A2PQ658T7 463 aa10.09□□□□□ -0.79
LIN54-201ENST00000340417 APRG1Q8IVJ8 170 aa10.09□□□□□ -0.79
LIN54-201ENST00000340417 SCGB3A1Q96QR1 104 aa10.09□□□□□ -0.79
LIN54-201ENST00000340417 SOX21Q9Y651 276 aaPredicted RBP10.09□□□□□ -0.79
LIN54-201ENST00000340417 NCKAP5O14513 1909 aa10.09□□□□□ -0.79
LIN54-201ENST00000340417 CBLN1P23435 193 aa10.09□□□□□ -0.79
LIN54-201ENST00000340417 OR10AG1Q8NH19 301 aa10.08□□□□□ -0.8
LIN54-201ENST00000340417 IGKV3D-20A0A0C4DH25 116 aa10.08□□□□□ -0.8
LIN54-201ENST00000340417 HIGD1CA8MV81 97 aa10.08□□□□□ -0.8
LIN54-201ENST00000340417 NAV2Q8IVL1 2488 aa10.08□□□□□ -0.8
LIN54-201ENST00000340417 TMEM170BQ5T4T1 132 aa10.08□□□□□ -0.8
LIN54-201ENST00000340417 CFHR4Q92496 578 aa10.08□□□□□ -0.8
LIN54-201ENST00000340417 RITA1Q96K30 269 aa10.08□□□□□ -0.8
LIN54-201ENST00000340417 RNASE7Q9H1E1 156 aaKnown RBP10.08□□□□□ -0.8
LIN54-201ENST00000340417 HINT1P49773 126 aaPredicted RBP10.08□□□□□ -0.8
LIN54-201ENST00000340417 FOXA3P55318 350 aaPredicted RBP10.08□□□□□ -0.8
LIN54-201ENST00000340417 MORN3Q6PF18 240 aaPredicted RBP10.08□□□□□ -0.8
LIN54-201ENST00000340417 WIPF2Q8TF74 440 aaPredicted RBP10.08□□□□□ -0.8
LIN54-201ENST00000340417 ATP6V0BQ99437 205 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms