RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 TMEM160Q9NX00 188 aa11.31□□□□□ -0.6
PCDH8-201ENST00000338862 SMG1Q96Q15 3661 aaKnown RBP11.3□□□□□ -0.6
PCDH8-201ENST00000338862 LOC105371242A0A075B767 164 aa11.3□□□□□ -0.6
PCDH8-201ENST00000338862 ADIPOQQ15848 244 aa11.3□□□□□ -0.6
PCDH8-201ENST00000338862 C8orf46Q8TAG6 207 aa11.3□□□□□ -0.6
PCDH8-201ENST00000338862 PPIAL4CA0A0B4J2A2 164 aa11.3□□□□□ -0.6
PCDH8-201ENST00000338862 A1L4Q6 167 aa11.3□□□□□ -0.6
PCDH8-201ENST00000338862 A6NDN8 102 aa11.3□□□□□ -0.6
PCDH8-201ENST00000338862 PPIAL4GP0DN37 164 aa11.3□□□□□ -0.6
PCDH8-201ENST00000338862 PLP1P60201 277 aa11.3□□□□□ -0.6
PCDH8-201ENST00000338862 ECSCRQ19T08 205 aa11.3□□□□□ -0.6
PCDH8-201ENST00000338862 Q86TA4 180 aa11.3□□□□□ -0.6
PCDH8-201ENST00000338862 MBD6Q96DN6 1003 aa11.3□□□□□ -0.6
PCDH8-201ENST00000338862 PCSK5Q92824 1860 aa11.3□□□□□ -0.6
PCDH8-201ENST00000338862 TRAV30A0A087WSZ9 112 aa11.3□□□□□ -0.6
PCDH8-201ENST00000338862 CRYABP02511 175 aaKnown RBP11.3□□□□□ -0.6
PCDH8-201ENST00000338862 NGBQ9NPG2 151 aa11.3□□□□□ -0.6
PCDH8-201ENST00000338862 C2CD3Q4AC94 2353 aa11.3□□□□□ -0.6
PCDH8-201ENST00000338862 IGKV1D-37A0A075B6S9 117 aa11.29□□□□□ -0.6
PCDH8-201ENST00000338862 GOSR1O95249 250 aa11.29□□□□□ -0.6
PCDH8-201ENST00000338862 OR5AN1Q8NGI8 311 aa11.29□□□□□ -0.6
PCDH8-201ENST00000338862 FAM215AQ9Y5M1 114 aa11.29□□□□□ -0.6
PCDH8-201ENST00000338862 TAX1BP3O14907 124 aa11.29□□□□□ -0.6
PCDH8-201ENST00000338862 TOMM40O96008 361 aa11.29□□□□□ -0.6
PCDH8-201ENST00000338862 LHBP01229 141 aa11.29□□□□□ -0.6
PCDH8-201ENST00000338862 LGALS7P47929 136 aa11.29□□□□□ -0.6
PCDH8-201ENST00000338862 KLRD1Q13241 179 aa11.29□□□□□ -0.6
PCDH8-201ENST00000338862 FAM120AOSQ5T036 256 aa11.29□□□□□ -0.6
PCDH8-201ENST00000338862 CGB3P0DN86 165 aa11.29□□□□□ -0.6
PCDH8-201ENST00000338862 CGB7P0DN87 165 aa11.29□□□□□ -0.6
PCDH8-201ENST00000338862 RBX1P62877 108 aa11.29□□□□□ -0.6
PCDH8-201ENST00000338862 ATP5L2Q7Z4Y8 100 aa11.29□□□□□ -0.6
PCDH8-201ENST00000338862 MRPL52Q86TS9 123 aaKnown RBP11.29□□□□□ -0.6
PCDH8-201ENST00000338862 IGHV2-70DA0A0C4DH43 119 aa11.28□□□□□ -0.6
PCDH8-201ENST00000338862 TIMM23O14925 209 aa11.28□□□□□ -0.6
PCDH8-201ENST00000338862 SPRY2O43597 315 aa11.28□□□□□ -0.6
PCDH8-201ENST00000338862 IGHV1-8P0DP01 117 aa11.28□□□□□ -0.6
PCDH8-201ENST00000338862 HIST1H1AQ02539 215 aaPredicted RBP11.28□□□□□ -0.6
PCDH8-201ENST00000338862 ANKRD39Q53RE8 183 aa11.28□□□□□ -0.6
PCDH8-201ENST00000338862 CHCHD1Q96BP2 118 aaKnown RBP11.28□□□□□ -0.6
PCDH8-201ENST00000338862 SPCS1Q9Y6A9 102 aa11.28□□□□□ -0.6
PCDH8-201ENST00000338862 PET117Q6UWS5 81 aa11.28□□□□□ -0.6
PCDH8-201ENST00000338862 HLA-DMBP28068 263 aa11.27□□□□□ -0.6
PCDH8-201ENST00000338862 FAM231DQ6ZW35 169 aa11.27□□□□□ -0.6
PCDH8-201ENST00000338862 S100A7AQ86SG5 101 aa11.27□□□□□ -0.6
PCDH8-201ENST00000338862 OTORQ9NRC9 128 aa11.27□□□□□ -0.6
PCDH8-201ENST00000338862 CTSZQ9UBR2 303 aa11.27□□□□□ -0.6
PCDH8-201ENST00000338862 SIGLEC9Q9Y336 463 aa11.27□□□□□ -0.6
PCDH8-201ENST00000338862 TMEM178BH3BS89 294 aa11.27□□□□□ -0.61
PCDH8-201ENST00000338862 K7EP13 123 aa11.27□□□□□ -0.61
PCDH8-201ENST00000338862 ZNF833PQ6ZTB9 187 aa11.27□□□□□ -0.61
PCDH8-201ENST00000338862 PCP2Q8IVA1 136 aa11.27□□□□□ -0.61
PCDH8-201ENST00000338862 RNF125Q96EQ8 232 aa11.27□□□□□ -0.61
PCDH8-201ENST00000338862 URB1-AS1Q96HZ7 61 aa11.27□□□□□ -0.61
PCDH8-201ENST00000338862 RABAC1Q9UI14 185 aa11.27□□□□□ -0.61
PCDH8-201ENST00000338862 ZNF883P0CG24 379 aa11.27□□□□□ -0.61
PCDH8-201ENST00000338862 GTSCR1Q86UQ5 136 aa11.27□□□□□ -0.61
PCDH8-201ENST00000338862 CLEC3BP05452 202 aa11.26□□□□□ -0.61
PCDH8-201ENST00000338862 ORMDL3Q8N138 153 aa11.26□□□□□ -0.61
PCDH8-201ENST00000338862 BCL6BQ8N143 479 aaPredicted RBP11.26□□□□□ -0.61
PCDH8-201ENST00000338862 PRSS33Q8NF86 280 aa11.26□□□□□ -0.61
PCDH8-201ENST00000338862 NHP2Q9NX24 153 aaKnown RBP11.26□□□□□ -0.61
PCDH8-201ENST00000338862 ATP5IP56385 69 aaPredicted RBP11.26□□□□□ -0.61
PCDH8-201ENST00000338862 FOXE3Q13461 319 aa11.26□□□□□ -0.61
PCDH8-201ENST00000338862 KIR3DS1Q14943 382 aa11.26□□□□□ -0.61
PCDH8-201ENST00000338862 OR4A5Q8NH83 315 aa11.26□□□□□ -0.61
PCDH8-201ENST00000338862 FOXC2Q99958 501 aa11.26□□□□□ -0.61
PCDH8-201ENST00000338862 POU2AF1Q16633 256 aa11.26□□□□□ -0.61
PCDH8-201ENST00000338862 RASL11AQ6T310 242 aa11.26□□□□□ -0.61
PCDH8-201ENST00000338862 NDFIP1Q9BT67 221 aa11.26□□□□□ -0.61
PCDH8-201ENST00000338862 OR2K2Q8NGT1 345 aa11.25□□□□□ -0.61
PCDH8-201ENST00000338862 IGHV1-3A0A0C4DH29 117 aa11.25□□□□□ -0.61
PCDH8-201ENST00000338862 FNDC10F2Z333 226 aa11.25□□□□□ -0.61
PCDH8-201ENST00000338862 K7ERJ3 54 aa11.25□□□□□ -0.61
PCDH8-201ENST00000338862 RHOGP84095 191 aa11.25□□□□□ -0.61
PCDH8-201ENST00000338862 RNASE6Q93091 150 aaKnown RBP11.25□□□□□ -0.61
PCDH8-201ENST00000338862 IFI27L1Q96BM0 104 aa11.25□□□□□ -0.61
PCDH8-201ENST00000338862 MSRB1Q9NZV6 116 aa11.25□□□□□ -0.61
PCDH8-201ENST00000338862 DKK2Q9UBU2 259 aa11.25□□□□□ -0.61
PCDH8-201ENST00000338862 LEPP41159 167 aa11.25□□□□□ -0.61
PCDH8-201ENST00000338862 MEF2CQ06413 473 aaPredicted RBP11.25□□□□□ -0.61
PCDH8-201ENST00000338862 Q5PR19 223 aa11.25□□□□□ -0.61
PCDH8-201ENST00000338862 PTPRQQ9UMZ3 2332 aa11.25□□□□□ -0.61
PCDH8-201ENST00000338862 A0A0G2JLM5 398 aa11.24□□□□□ -0.61
PCDH8-201ENST00000338862 MBD3L4A6NDZ8 208 aaPredicted RBP11.24□□□□□ -0.61
PCDH8-201ENST00000338862 MBD3L3A6NE82 208 aaPredicted RBP11.24□□□□□ -0.61
PCDH8-201ENST00000338862 MBD3L5A6NJ08 208 aaPredicted RBP11.24□□□□□ -0.61
PCDH8-201ENST00000338862 FABP2P12104 132 aa11.24□□□□□ -0.61
PCDH8-201ENST00000338862 GATA1P15976 413 aaPredicted RBP11.24□□□□□ -0.61
PCDH8-201ENST00000338862 LOXP28300 417 aaPredicted RBP11.24□□□□□ -0.61
PCDH8-201ENST00000338862 MBD3L2Q8NHZ7 208 aaPredicted RBP11.24□□□□□ -0.61
PCDH8-201ENST00000338862 TRGV9Q99603 122 aa11.24□□□□□ -0.61
PCDH8-201ENST00000338862 LINC00527Q9UJ94 153 aa11.24□□□□□ -0.61
PCDH8-201ENST00000338862 IGLV3-9A0A075B6K5 115 aa11.24□□□□□ -0.61
PCDH8-201ENST00000338862 ERCC8Q13216 396 aa11.24□□□□□ -0.61
PCDH8-201ENST00000338862 KLF5Q13887 457 aaPredicted RBP11.24□□□□□ -0.61
PCDH8-201ENST00000338862 SIGLEC8Q9NYZ4 499 aa11.24□□□□□ -0.61
PCDH8-201ENST00000338862 C1RLQ9NZP8 487 aa11.24□□□□□ -0.61
PCDH8-201ENST00000338862 CHD8Q9HCK8 2581 aa11.23□□□□□ -0.61
PCDH8-201ENST00000338862 A0A0G2JNJ9 132 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms