RNA–Protein interactions for RNA: ENST00000338700.9

TRIM2-201, Transcript of tripartite motif containing 2, humanhuman

TSL 1 (best) BASIC

Gene TRIM2, Length 6,735 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-201ENST00000338700 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.26□□□□□ -1.41
TRIM2-201ENST00000338700 HIST1H2BHQ93079 126 aa6.26□□□□□ -1.41
TRIM2-201ENST00000338700 HIST1H2BNQ99877 126 aa6.26□□□□□ -1.41
TRIM2-201ENST00000338700 HIST1H2BMQ99879 126 aa6.26□□□□□ -1.41
TRIM2-201ENST00000338700 RFNGQ9Y644 331 aa6.26□□□□□ -1.41
TRIM2-201ENST00000338700 MORN3Q6PF18 240 aaPredicted RBP6.26□□□□□ -1.41
TRIM2-201ENST00000338700 ZNF562Q6V9R5 426 aa6.26□□□□□ -1.41
TRIM2-201ENST00000338700 UBE2E2Q96LR5 201 aa6.26□□□□□ -1.41
TRIM2-201ENST00000338700 AMBPP02760 352 aa6.26□□□□□ -1.41
TRIM2-201ENST00000338700 PLNP26678 52 aa6.25□□□□□ -1.41
TRIM2-201ENST00000338700 ZNF876PQ49A33 203 aa6.25□□□□□ -1.41
TRIM2-201ENST00000338700 SLC25A2Q9BXI2 301 aa6.25□□□□□ -1.41
TRIM2-201ENST00000338700 HELZP42694 1942 aaKnown RBP6.25□□□□□ -1.41
TRIM2-201ENST00000338700 IGHV3-53P01767 116 aa6.25□□□□□ -1.41
TRIM2-201ENST00000338700 GZMBP10144 247 aa6.25□□□□□ -1.41
TRIM2-201ENST00000338700 NTF4P34130 210 aa6.25□□□□□ -1.41
TRIM2-201ENST00000338700 SSBP2P81877 361 aaPredicted RBP6.25□□□□□ -1.41
TRIM2-201ENST00000338700 GAGE13Q4V321 117 aa6.25□□□□□ -1.41
TRIM2-201ENST00000338700 C9orf153Q5TBE3 101 aa6.25□□□□□ -1.41
TRIM2-201ENST00000338700 SAMD5Q5TGI4 173 aa6.25□□□□□ -1.41
TRIM2-201ENST00000338700 RASL11AQ6T310 242 aa6.25□□□□□ -1.41
TRIM2-201ENST00000338700 AGMATQ9BSE5 352 aa6.25□□□□□ -1.41
TRIM2-201ENST00000338700 OVOL3O00110 214 aa6.25□□□□□ -1.41
TRIM2-201ENST00000338700 FREM3P0C091 2139 aa6.25□□□□□ -1.41
TRIM2-201ENST00000338700 SRSF3P84103 164 aaKnown RBP6.25□□□□□ -1.41
TRIM2-201ENST00000338700 CR1LQ2VPA4 569 aa6.25□□□□□ -1.41
TRIM2-201ENST00000338700 LYZL1Q6UWQ5 148 aa6.25□□□□□ -1.41
TRIM2-201ENST00000338700 RNF144BQ7Z419 303 aa6.25□□□□□ -1.41
TRIM2-201ENST00000338700 SMIM20Q8N5G0 67 aa6.25□□□□□ -1.41
TRIM2-201ENST00000338700 PROK2Q9HC23 129 aa6.25□□□□□ -1.41
TRIM2-201ENST00000338700 A0A1B0GW64 132 aa6.25□□□□□ -1.41
TRIM2-201ENST00000338700 ATP6V0E1O15342 81 aa6.25□□□□□ -1.41
TRIM2-201ENST00000338700 CFHR2P36980 270 aa6.25□□□□□ -1.41
TRIM2-201ENST00000338700 LINC00158P58513 81 aa6.25□□□□□ -1.41
TRIM2-201ENST00000338700 MAPK1IP1LQ8NDC0 245 aa6.25□□□□□ -1.41
TRIM2-201ENST00000338700 SMPXQ9UHP9 88 aa6.25□□□□□ -1.41
TRIM2-201ENST00000338700 TECTAO75443 2155 aa6.25□□□□□ -1.41
TRIM2-201ENST00000338700 FANCMQ8IYD8 2048 aa6.25□□□□□ -1.41
TRIM2-201ENST00000338700 ZNF664Q8N3J9 261 aa6.25□□□□□ -1.41
TRIM2-201ENST00000338700 PTPRDP23468 1912 aa6.25□□□□□ -1.41
TRIM2-201ENST00000338700 TRAV2A0A0B4J234 112 aa6.25□□□□□ -1.41
TRIM2-201ENST00000338700 C15orf62A8K5M9 175 aa6.25□□□□□ -1.41
TRIM2-201ENST00000338700 PRB4P10163 310 aaPredicted RBP6.25□□□□□ -1.41
TRIM2-201ENST00000338700 ESPL1Q14674 2120 aa6.25□□□□□ -1.41
TRIM2-201ENST00000338700 C5orf24Q7Z6I8 188 aa6.25□□□□□ -1.41
TRIM2-201ENST00000338700 DMRTC2Q8IXT2 367 aaPredicted RBP6.25□□□□□ -1.41
TRIM2-201ENST00000338700 IFI27L1Q96BM0 104 aa6.25□□□□□ -1.41
TRIM2-201ENST00000338700 REG4Q9BYZ8 158 aa6.25□□□□□ -1.41
TRIM2-201ENST00000338700 ZNF815PA8K554 130 aa6.24□□□□□ -1.41
TRIM2-201ENST00000338700 VCYO14598 125 aa6.24□□□□□ -1.41
TRIM2-201ENST00000338700 AZU1P20160 251 aa6.24□□□□□ -1.41
TRIM2-201ENST00000338700 LMO1P25800 156 aa6.24□□□□□ -1.41
TRIM2-201ENST00000338700 S100A7L2Q5SY68 101 aa6.24□□□□□ -1.41
TRIM2-201ENST00000338700 TMEM242Q9NWH2 141 aa6.24□□□□□ -1.41
TRIM2-201ENST00000338700 A8MWP6 167 aa6.24□□□□□ -1.41
TRIM2-201ENST00000338700 SHANK2-AS3Q9BTD1 123 aa6.24□□□□□ -1.41
TRIM2-201ENST00000338700 MCRIP2Q9BUT9 160 aaKnown RBP6.24□□□□□ -1.41
TRIM2-201ENST00000338700 LY96Q9Y6Y9 160 aa6.24□□□□□ -1.41
TRIM2-201ENST00000338700 ICE1Q9Y2F5 2266 aa6.24□□□□□ -1.41
TRIM2-201ENST00000338700 IGKV1-16P04430 117 aa6.24□□□□□ -1.41
TRIM2-201ENST00000338700 ZNF833PQ6ZTB9 187 aa6.24□□□□□ -1.41
TRIM2-201ENST00000338700 PHLDA1Q8WV24 401 aaPredicted RBP6.24□□□□□ -1.41
TRIM2-201ENST00000338700 WT1P19544 449 aaPredicted RBP6.24□□□□□ -1.41
TRIM2-201ENST00000338700 DEFB131AP59861 70 aa6.24□□□□□ -1.41
TRIM2-201ENST00000338700 TEX43Q6ZNM6 134 aa6.24□□□□□ -1.41
TRIM2-201ENST00000338700 CSTL1Q9H114 145 aa6.24□□□□□ -1.41
TRIM2-201ENST00000338700 ZNF581Q9P0T4 197 aa6.24□□□□□ -1.41
TRIM2-201ENST00000338700 NCOR1O75376 2440 aa6.24□□□□□ -1.41
TRIM2-201ENST00000338700 MUC6Q6W4X9 2439 aa6.24□□□□□ -1.41
TRIM2-201ENST00000338700 NDUFB8O95169 186 aa6.24□□□□□ -1.41
TRIM2-201ENST00000338700 SEC11AP67812 179 aa6.24□□□□□ -1.41
TRIM2-201ENST00000338700 ERCC8Q13216 396 aa6.24□□□□□ -1.41
TRIM2-201ENST00000338700 Q8TAT8 98 aa6.24□□□□□ -1.41
TRIM2-201ENST00000338700 RASL10AQ92737 203 aa6.24□□□□□ -1.41
TRIM2-201ENST00000338700 CYTL1Q9NRR1 136 aa6.24□□□□□ -1.41
TRIM2-201ENST00000338700 COLCA2A8K830 154 aa6.23□□□□□ -1.41
TRIM2-201ENST00000338700 D6R8Y8 96 aa6.23□□□□□ -1.41
TRIM2-201ENST00000338700 E9PQ18 207 aa6.23□□□□□ -1.41
TRIM2-201ENST00000338700 PDE6HQ13956 83 aa6.23□□□□□ -1.41
TRIM2-201ENST00000338700 SNHG12Q9BXW3 62 aa6.23□□□□□ -1.41
TRIM2-201ENST00000338700 A0A1W2PPI3 338 aa6.23□□□□□ -1.41
TRIM2-201ENST00000338700 LINC00205P59089 165 aa6.23□□□□□ -1.41
TRIM2-201ENST00000338700 TEX36Q5VZQ5 186 aa6.23□□□□□ -1.41
TRIM2-201ENST00000338700 FHL1Q13642 323 aa6.23□□□□□ -1.41
TRIM2-201ENST00000338700 ZNF843Q8N446 348 aa6.23□□□□□ -1.41
TRIM2-201ENST00000338700 NOTCH4Q99466 2003 aa6.23□□□□□ -1.41
TRIM2-201ENST00000338700 IGLV1-44P01699 117 aa6.23□□□□□ -1.41
TRIM2-201ENST00000338700 FOXL1Q12952 345 aa6.23□□□□□ -1.41
TRIM2-201ENST00000338700 IGFL4Q6B9Z1 124 aa6.23□□□□□ -1.41
TRIM2-201ENST00000338700 SPTBN2O15020 2390 aa6.23□□□□□ -1.41
TRIM2-201ENST00000338700 TRAV9-2A0A087WT02 112 aa6.23□□□□□ -1.41
TRIM2-201ENST00000338700 NCR2O95944 276 aa6.23□□□□□ -1.41
TRIM2-201ENST00000338700 RPP25LQ8N5L8 163 aaKnown RBP6.23□□□□□ -1.41
TRIM2-201ENST00000338700 PLEKHB2Q96CS7 222 aa6.23□□□□□ -1.41
TRIM2-201ENST00000338700 SDK2Q58EX2 2172 aa6.23□□□□□ -1.41
TRIM2-201ENST00000338700 IGHV3-64A0A075B6Q5 118 aa6.22□□□□□ -1.41
TRIM2-201ENST00000338700 HOXA3O43365 443 aaPredicted RBP6.22□□□□□ -1.41
TRIM2-201ENST00000338700 YPEL3P61236 119 aaPredicted RBP6.22□□□□□ -1.41
TRIM2-201ENST00000338700 NAA38Q9BRA0 125 aaKnown RBP6.22□□□□□ -1.41
TRIM2-201ENST00000338700 TSSC4Q9Y5U2 329 aaPredicted RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms