RNA–Protein interactions for RNA: ENST00000335508.10

SF3B1-201, Transcript of splicing factor 3b subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B1, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-201ENST00000335508 DPH3Q96FX2 82 aa5.47□□□□□ -1.53
SF3B1-201ENST00000335508 FNDC4Q9H6D8 234 aaPredicted RBP5.47□□□□□ -1.53
SF3B1-201ENST00000335508 IL36BQ9NZH7 164 aa5.47□□□□□ -1.53
SF3B1-201ENST00000335508 TMEM14CQ9P0S9 112 aa5.47□□□□□ -1.53
SF3B1-201ENST00000335508 HTTP42858 3142 aa5.47□□□□□ -1.53
SF3B1-201ENST00000335508 CRYGCP07315 174 aa5.47□□□□□ -1.53
SF3B1-201ENST00000335508 GCSAMLQ5JQS6 135 aa5.47□□□□□ -1.53
SF3B1-201ENST00000335508 LINC01551Q86U37 167 aa5.47□□□□□ -1.53
SF3B1-201ENST00000335508 ZNF114Q8NC26 417 aa5.47□□□□□ -1.53
SF3B1-201ENST00000335508 RPP21Q9H633 154 aaKnown RBP5.47□□□□□ -1.53
SF3B1-201ENST00000335508 ZNF207O43670 478 aaKnown RBP5.47□□□□□ -1.53
SF3B1-201ENST00000335508 RNASEKQ6P5S7 137 aaKnown RBP5.47□□□□□ -1.53
SF3B1-201ENST00000335508 NEU1Q99519 415 aa5.47□□□□□ -1.53
SF3B1-201ENST00000335508 C1orf43Q9BWL3 253 aa5.47□□□□□ -1.53
SF3B1-201ENST00000335508 ZNRD1Q9P1U0 126 aa5.47□□□□□ -1.53
SF3B1-201ENST00000335508 M0R3E3 92 aa5.46□□□□□ -1.53
SF3B1-201ENST00000335508 SMIM6P0DI80 62 aa5.46□□□□□ -1.53
SF3B1-201ENST00000335508 TWIST1Q15672 202 aa5.46□□□□□ -1.53
SF3B1-201ENST00000335508 ZNF843Q8N446 348 aa5.46□□□□□ -1.53
SF3B1-201ENST00000335508 TTC9CQ8N5M4 171 aa5.46□□□□□ -1.53
SF3B1-201ENST00000335508 THAP8Q8NA92 274 aa5.46□□□□□ -1.53
SF3B1-201ENST00000335508 G3V318 75 aa5.46□□□□□ -1.54
SF3B1-201ENST00000335508 APCSP02743 223 aa5.46□□□□□ -1.54
SF3B1-201ENST00000335508 SNRPEP62304 92 aaKnown RBP5.46□□□□□ -1.54
SF3B1-201ENST00000335508 SIGLEC15Q6ZMC9 328 aa5.46□□□□□ -1.54
SF3B1-201ENST00000335508 ATP5L2Q7Z4Y8 100 aa5.46□□□□□ -1.54
SF3B1-201ENST00000335508 TBX15Q96SF7 602 aa5.46□□□□□ -1.54
SF3B1-201ENST00000335508 RARRES2Q99969 163 aa5.46□□□□□ -1.54
SF3B1-201ENST00000335508 PHOX2AO14813 284 aa5.46□□□□□ -1.54
SF3B1-201ENST00000335508 CSN3P07498 182 aa5.46□□□□□ -1.54
SF3B1-201ENST00000335508 PAX2Q02962 417 aa5.46□□□□□ -1.54
SF3B1-201ENST00000335508 CT83Q5H943 113 aa5.46□□□□□ -1.54
SF3B1-201ENST00000335508 C11orf71Q6IPW1 123 aa5.46□□□□□ -1.54
SF3B1-201ENST00000335508 Q6ZN92 141 aa5.46□□□□□ -1.54
SF3B1-201ENST00000335508 MCRIP2Q9BUT9 160 aaKnown RBP5.46□□□□□ -1.54
SF3B1-201ENST00000335508 AKAP13Q12802 2813 aa5.46□□□□□ -1.54
SF3B1-201ENST00000335508 VWC2Q2TAL6 325 aa5.46□□□□□ -1.54
SF3B1-201ENST00000335508 IGHV7-81A0A0B4J1V7 117 aa5.46□□□□□ -1.54
SF3B1-201ENST00000335508 P0C879 139 aa5.46□□□□□ -1.54
SF3B1-201ENST00000335508 HTN1P15515 57 aa5.46□□□□□ -1.54
SF3B1-201ENST00000335508 PSG3Q16557 428 aa5.46□□□□□ -1.54
SF3B1-201ENST00000335508 DEFB112Q30KQ8 113 aa5.46□□□□□ -1.54
SF3B1-201ENST00000335508 LINC01559Q495D7 138 aa5.46□□□□□ -1.54
SF3B1-201ENST00000335508 FAM53AQ6NSI3 398 aaPredicted RBP5.46□□□□□ -1.54
SF3B1-201ENST00000335508 CRIP3Q6Q6R5 217 aa5.46□□□□□ -1.54
SF3B1-201ENST00000335508 ZNF841Q6ZN19 808 aa5.46□□□□□ -1.54
SF3B1-201ENST00000335508 FER1L6-AS1Q8NA97 138 aa5.46□□□□□ -1.54
SF3B1-201ENST00000335508 TSKUQ8WUA8 353 aa5.46□□□□□ -1.54
SF3B1-201ENST00000335508 Q8N7P7 452 aa5.45□□□□□ -1.54
SF3B1-201ENST00000335508 OR10D4PQ8NGN7 298 aa5.45□□□□□ -1.54
SF3B1-201ENST00000335508 IMMP2LQ96T52 175 aa5.45□□□□□ -1.54
SF3B1-201ENST00000335508 EML6Q6ZMW3 1958 aa5.45□□□□□ -1.54
SF3B1-201ENST00000335508 TRGV11A0A075B6L2 103 aa5.45□□□□□ -1.54
SF3B1-201ENST00000335508 FAM181BA6NEQ2 426 aa5.45□□□□□ -1.54
SF3B1-201ENST00000335508 FCER1GP30273 86 aa5.45□□□□□ -1.54
SF3B1-201ENST00000335508 ZNF491Q8N8L2 437 aa5.45□□□□□ -1.54
SF3B1-201ENST00000335508 KLHL30-AS1Q8NEE0 82 aa5.45□□□□□ -1.54
SF3B1-201ENST00000335508 SCO2A0A1W2PP80 73 aa5.45□□□□□ -1.54
SF3B1-201ENST00000335508 OR11H12B2RN74 326 aa5.45□□□□□ -1.54
SF3B1-201ENST00000335508 ZNF688P0C7X2 276 aa5.45□□□□□ -1.54
SF3B1-201ENST00000335508 KRTDAPP60985 99 aa5.45□□□□□ -1.54
SF3B1-201ENST00000335508 C3orf56Q8N813 242 aa5.45□□□□□ -1.54
SF3B1-201ENST00000335508 OCC1Q8TAD7 63 aa5.45□□□□□ -1.54
SF3B1-201ENST00000335508 SCRT1Q9BWW7 348 aa5.45□□□□□ -1.54
SF3B1-201ENST00000335508 MAP1LC3AQ9H492 121 aa5.45□□□□□ -1.54
SF3B1-201ENST00000335508 SPATA31B1PQ5VZV4 182 aa5.45□□□□□ -1.54
SF3B1-201ENST00000335508 AJUBAQ96IF1 538 aa5.45□□□□□ -1.54
SF3B1-201ENST00000335508 HSPB8Q9UJY1 196 aa5.45□□□□□ -1.54
SF3B1-201ENST00000335508 UBR5O95071 2799 aaPredicted RBP5.45□□□□□ -1.54
SF3B1-201ENST00000335508 MRPL52Q86TS9 123 aaKnown RBP5.45□□□□□ -1.54
SF3B1-201ENST00000335508 ORMDL3Q8N138 153 aa5.45□□□□□ -1.54
SF3B1-201ENST00000335508 NSD1Q96L73 2696 aaPredicted RBP5.44□□□□□ -1.54
SF3B1-201ENST00000335508 TRBV19A0A075B6N1 114 aa5.44□□□□□ -1.54
SF3B1-201ENST00000335508 M0R2Z0 102 aa5.44□□□□□ -1.54
SF3B1-201ENST00000335508 CDX1P47902 265 aaPredicted RBP5.44□□□□□ -1.54
SF3B1-201ENST00000335508 HERVK_113P61574 105 aa5.44□□□□□ -1.54
SF3B1-201ENST00000335508 FOXE3Q13461 319 aa5.44□□□□□ -1.54
SF3B1-201ENST00000335508 PMCHL1Q16048 86 aa5.44□□□□□ -1.54
SF3B1-201ENST00000335508 RASL11AQ6T310 242 aa5.44□□□□□ -1.54
SF3B1-201ENST00000335508 Q8N9W7 124 aa5.44□□□□□ -1.54
SF3B1-201ENST00000335508 OR10AG1Q8NH19 301 aa5.44□□□□□ -1.54
SF3B1-201ENST00000335508 SGK494Q96LW2 274 aa5.44□□□□□ -1.54
SF3B1-201ENST00000335508 DNAH12Q6ZR08 3092 aa5.44□□□□□ -1.54
SF3B1-201ENST00000335508 IGLV11-55A0A075B6I3 123 aa5.44□□□□□ -1.54
SF3B1-201ENST00000335508 LEPROTL1O95214 131 aa5.44□□□□□ -1.54
SF3B1-201ENST00000335508 LEPP41159 167 aa5.44□□□□□ -1.54
SF3B1-201ENST00000335508 TMEM183BQ1AE95 376 aa5.44□□□□□ -1.54
SF3B1-201ENST00000335508 UBE2E2Q96LR5 201 aa5.44□□□□□ -1.54
SF3B1-201ENST00000335508 LRP4O75096 1905 aa5.44□□□□□ -1.54
SF3B1-201ENST00000335508 RUSC1-AS1Q66K80 236 aa5.44□□□□□ -1.54
SF3B1-201ENST00000335508 FAM231DQ6ZW35 169 aa5.44□□□□□ -1.54
SF3B1-201ENST00000335508 TRGC2P03986 189 aa5.44□□□□□ -1.54
SF3B1-201ENST00000335508 LYPD6BQ8NI32 183 aa5.44□□□□□ -1.54
SF3B1-201ENST00000335508 WFDC12Q8WWY7 111 aa5.44□□□□□ -1.54
SF3B1-201ENST00000335508 FOXC2Q99958 501 aa5.44□□□□□ -1.54
SF3B1-201ENST00000335508 SMPXQ9UHP9 88 aa5.44□□□□□ -1.54
SF3B1-201ENST00000335508 ODF3BA8MYP8 253 aa5.44□□□□□ -1.54
SF3B1-201ENST00000335508 K7EMT4 169 aa5.44□□□□□ -1.54
SF3B1-201ENST00000335508 LCNL1Q6ZST4 164 aa5.44□□□□□ -1.54
SF3B1-201ENST00000335508 REC114Q7Z4M0 266 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms