RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 OR51M1Q9H341 326 aa13.08□□□□□ -0.32
CHGA-202ENST00000334654 ZNF586Q9NXT0 402 aa13.08□□□□□ -0.32
CHGA-202ENST00000334654 HIST1H1EP10412 219 aaKnown RBP13.07□□□□□ -0.32
CHGA-202ENST00000334654 TFPI2P48307 235 aa13.07□□□□□ -0.32
CHGA-202ENST00000334654 TAS2R45P59539 299 aa13.07□□□□□ -0.32
CHGA-202ENST00000334654 GUCA2BQ16661 112 aa13.07□□□□□ -0.32
CHGA-202ENST00000334654 KHDC3LQ587J8 217 aa13.07□□□□□ -0.32
CHGA-202ENST00000334654 WFDC3Q8IUB2 231 aa13.07□□□□□ -0.32
CHGA-202ENST00000334654 PAXXQ9BUH6 204 aa13.07□□□□□ -0.32
CHGA-202ENST00000334654 HRH4Q9H3N8 390 aa13.07□□□□□ -0.32
CHGA-202ENST00000334654 ZNF705EA8MWA4 302 aaPredicted RBP13.06□□□□□ -0.32
CHGA-202ENST00000334654 H3BTX0 84 aa13.06□□□□□ -0.32
CHGA-202ENST00000334654 OR7C2O60412 319 aa13.06□□□□□ -0.32
CHGA-202ENST00000334654 OR10J4P0C629 311 aa13.06□□□□□ -0.32
CHGA-202ENST00000334654 ARL14EPLP0DKL9 152 aa13.06□□□□□ -0.32
CHGA-202ENST00000334654 S100A1P23297 94 aa13.06□□□□□ -0.32
CHGA-202ENST00000334654 PQLC2Q6ZP29 291 aa13.06□□□□□ -0.32
CHGA-202ENST00000334654 EIF4E3Q8N5X7 224 aaKnown RBP13.06□□□□□ -0.32
CHGA-202ENST00000334654 LYPD6BQ8NI32 183 aa13.06□□□□□ -0.32
CHGA-202ENST00000334654 FAM213BQ8TBF2 198 aa13.06□□□□□ -0.32
CHGA-202ENST00000334654 MBD3L1Q8WWY6 194 aa13.06□□□□□ -0.32
CHGA-202ENST00000334654 TRAV8-2A0A0B4J237 113 aa13.05□□□□□ -0.32
CHGA-202ENST00000334654 DNASE2O00115 360 aaPredicted RBP13.05□□□□□ -0.32
CHGA-202ENST00000334654 NDUFB4O95168 129 aa13.05□□□□□ -0.32
CHGA-202ENST00000334654 CD7P09564 240 aa13.05□□□□□ -0.32
CHGA-202ENST00000334654 ATF4P18848 351 aaPredicted RBP13.05□□□□□ -0.32
CHGA-202ENST00000334654 PAFAH1B2P68402 229 aa13.05□□□□□ -0.32
CHGA-202ENST00000334654 SUN5Q8TC36 379 aa13.05□□□□□ -0.32
CHGA-202ENST00000334654 C19orf73Q9NVV2 129 aa13.05□□□□□ -0.32
CHGA-202ENST00000334654 TRBV19A0A075B6N1 114 aa13.04□□□□□ -0.32
CHGA-202ENST00000334654 OR4C46A6NHA9 309 aa13.04□□□□□ -0.32
CHGA-202ENST00000334654 TEX46H3BTG2 121 aa13.04□□□□□ -0.32
CHGA-202ENST00000334654 SLC17A3O00476 420 aa13.04□□□□□ -0.32
CHGA-202ENST00000334654 NBEAP1P0C6P0 100 aa13.04□□□□□ -0.32
CHGA-202ENST00000334654 LCN15Q6UWW0 184 aa13.04□□□□□ -0.32
CHGA-202ENST00000334654 Q8N1Y9 231 aa13.04□□□□□ -0.32
CHGA-202ENST00000334654 PRR25Q96S07 402 aa13.04□□□□□ -0.32
CHGA-202ENST00000334654 RAB19A4D1S5 217 aa13.04□□□□□ -0.32
CHGA-202ENST00000334654 GCHFRP30047 84 aa13.04□□□□□ -0.32
CHGA-202ENST00000334654 MEOX2P50222 304 aa13.04□□□□□ -0.32
CHGA-202ENST00000334654 FGF8P55075 233 aaPredicted RBP13.04□□□□□ -0.32
CHGA-202ENST00000334654 ODF3L2Q3SX64 289 aa13.04□□□□□ -0.32
CHGA-202ENST00000334654 IGFL4Q6B9Z1 124 aa13.04□□□□□ -0.32
CHGA-202ENST00000334654 TMPRSS5Q9H3S3 457 aa13.04□□□□□ -0.32
CHGA-202ENST00000334654 ZNF331Q9NQX6 463 aaPredicted RBP13.04□□□□□ -0.32
CHGA-202ENST00000334654 TRAV1-1A0A0B4J248 108 aa13.03□□□□□ -0.32
CHGA-202ENST00000334654 MAP1LC3B2A6NCE7 125 aa13.03□□□□□ -0.32
CHGA-202ENST00000334654 CXorf1O96002 111 aa13.03□□□□□ -0.32
CHGA-202ENST00000334654 GUK1Q16774 197 aa13.03□□□□□ -0.32
CHGA-202ENST00000334654 SLC7A5P1Q8MH63 180 aa13.03□□□□□ -0.32
CHGA-202ENST00000334654 C20orf173Q96LM9 149 aa13.03□□□□□ -0.32
CHGA-202ENST00000334654 MAP1LC3BQ9GZQ8 125 aa13.03□□□□□ -0.32
CHGA-202ENST00000334654 AGRNO00468 2067 aa13.02□□□□□ -0.33
CHGA-202ENST00000334654 ISLRO14498 428 aa13.02□□□□□ -0.33
CHGA-202ENST00000334654 ZNF253O75346 499 aa13.02□□□□□ -0.33
CHGA-202ENST00000334654 ATP6V1G1O75348 118 aa13.02□□□□□ -0.33
CHGA-202ENST00000334654 H2AFB1P0C5Y9 115 aa13.02□□□□□ -0.33
CHGA-202ENST00000334654 HLA-DMBP28068 263 aa13.02□□□□□ -0.33
CHGA-202ENST00000334654 UBE2L3P68036 154 aaKnown RBP13.02□□□□□ -0.33
CHGA-202ENST00000334654 SFT2D1Q8WV19 159 aa13.02□□□□□ -0.33
CHGA-202ENST00000334654 BLNKQ8WV28 456 aa13.02□□□□□ -0.33
CHGA-202ENST00000334654 ZMAT5Q9UDW3 170 aaKnown RBP13.02□□□□□ -0.33
CHGA-202ENST00000334654 HBE1P02100 147 aa13.01□□□□□ -0.33
CHGA-202ENST00000334654 ZNF688P0C7X2 276 aa13.01□□□□□ -0.33
CHGA-202ENST00000334654 PDE6HQ13956 83 aa13.01□□□□□ -0.33
CHGA-202ENST00000334654 UQCC3Q6UW78 93 aa13.01□□□□□ -0.33
CHGA-202ENST00000334654 C16orf92Q96LL3 132 aa13.01□□□□□ -0.33
CHGA-202ENST00000334654 FAM110AQ9BQ89 295 aa13.01□□□□□ -0.33
CHGA-202ENST00000334654 MAP6D1Q9H9H5 199 aa13.01□□□□□ -0.33
CHGA-202ENST00000334654 PSMB3P49720 205 aa13□□□□□ -0.33
CHGA-202ENST00000334654 CD81P60033 236 aa13□□□□□ -0.33
CHGA-202ENST00000334654 PMS2P11Q13670 270 aa13□□□□□ -0.33
CHGA-202ENST00000334654 RNF182Q8N6D2 247 aa13□□□□□ -0.33
CHGA-202ENST00000334654 SLC50A1Q9BRV3 221 aa13□□□□□ -0.33
CHGA-202ENST00000334654 WFDC10AQ9H1F0 79 aa13□□□□□ -0.33
CHGA-202ENST00000334654 PRB2P02812 416 aaPredicted RBP12.99□□□□□ -0.33
CHGA-202ENST00000334654 DEFB131AP59861 70 aa12.99□□□□□ -0.33
CHGA-202ENST00000334654 CCL20P78556 96 aa12.99□□□□□ -0.33
CHGA-202ENST00000334654 ZNF124Q15973 351 aa12.99□□□□□ -0.33
CHGA-202ENST00000334654 SAMD13Q5VXD3 122 aa12.99□□□□□ -0.33
CHGA-202ENST00000334654 COMMD7Q86VX2 200 aa12.99□□□□□ -0.33
CHGA-202ENST00000334654 CITED4Q96RK1 184 aa12.99□□□□□ -0.33
CHGA-202ENST00000334654 SMDT1Q9H4I9 107 aa12.99□□□□□ -0.33
CHGA-202ENST00000334654 ID1P41134 155 aa12.98□□□□□ -0.33
CHGA-202ENST00000334654 DEFB1P60022 68 aa12.98□□□□□ -0.33
CHGA-202ENST00000334654 PSMG4Q5JS54 123 aa12.98□□□□□ -0.33
CHGA-202ENST00000334654 EXOC3-AS1Q8N2X6 119 aa12.98□□□□□ -0.33
CHGA-202ENST00000334654 TMEM167BQ9NRX6 74 aa12.98□□□□□ -0.33
CHGA-202ENST00000334654 AURKAIP1Q9NWT8 199 aaPredicted RBP12.98□□□□□ -0.33
CHGA-202ENST00000334654 A0A1B0GV50 99 aa12.97□□□□□ -0.33
CHGA-202ENST00000334654 SNRPD3P62318 126 aaKnown RBP12.97□□□□□ -0.33
CHGA-202ENST00000334654 RANP62826 216 aaKnown RBP12.97□□□□□ -0.33
CHGA-202ENST00000334654 PSG3Q16557 428 aa12.97□□□□□ -0.33
CHGA-202ENST00000334654 GTSCR1Q86UQ5 136 aa12.97□□□□□ -0.33
CHGA-202ENST00000334654 APRG1Q8IVJ8 170 aa12.97□□□□□ -0.33
CHGA-202ENST00000334654 OR11H12B2RN74 326 aa12.97□□□□□ -0.33
CHGA-202ENST00000334654 CMC4P56277 68 aaPredicted RBP12.97□□□□□ -0.33
CHGA-202ENST00000334654 PSG9Q00887 426 aa12.97□□□□□ -0.33
CHGA-202ENST00000334654 LYPD1Q8N2G4 141 aa12.97□□□□□ -0.33
CHGA-202ENST00000334654 DEFB125Q8N687 156 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms