RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 NUP210LQ5VU65 1888 aa8.94□□□□□ -0.98
POLR1B-202ENST00000333990 LINC01549A6NIU2 74 aa8.94□□□□□ -0.98
POLR1B-202ENST00000333990 RPL13AP40429 203 aaKnown RBP8.94□□□□□ -0.98
POLR1B-202ENST00000333990 VAMP3Q15836 100 aa8.94□□□□□ -0.98
POLR1B-202ENST00000333990 ATP5L2Q7Z4Y8 100 aa8.94□□□□□ -0.98
POLR1B-202ENST00000333990 LRP4O75096 1905 aa8.94□□□□□ -0.98
POLR1B-202ENST00000333990 PAX9P55771 341 aa8.94□□□□□ -0.98
POLR1B-202ENST00000333990 OR10J3Q5JRS4 329 aa8.94□□□□□ -0.98
POLR1B-202ENST00000333990 ST20Q9HBF5 79 aa8.94□□□□□ -0.98
POLR1B-202ENST00000333990 MUC21A0A0G2JKD1 596 aa8.94□□□□□ -0.98
POLR1B-202ENST00000333990 MUC21A0A140T8X8 626 aa8.94□□□□□ -0.98
POLR1B-202ENST00000333990 J3QR89 54 aa8.94□□□□□ -0.98
POLR1B-202ENST00000333990 CIRBPQ14011 172 aaKnown RBP8.94□□□□□ -0.98
POLR1B-202ENST00000333990 TCTEX1D4Q5JR98 221 aa8.94□□□□□ -0.98
POLR1B-202ENST00000333990 FAM120AOSQ5T036 256 aa8.94□□□□□ -0.98
POLR1B-202ENST00000333990 C1QL4Q86Z23 238 aa8.94□□□□□ -0.98
POLR1B-202ENST00000333990 COPS9Q8WXC6 57 aa8.94□□□□□ -0.98
POLR1B-202ENST00000333990 C2orf88Q9BSF0 95 aa8.94□□□□□ -0.98
POLR1B-202ENST00000333990 TSSC4Q9Y5U2 329 aaPredicted RBP8.94□□□□□ -0.98
POLR1B-202ENST00000333990 IGHV4-38-2P0DP08 117 aa8.93□□□□□ -0.98
POLR1B-202ENST00000333990 IMMP2LQ96T52 175 aa8.93□□□□□ -0.98
POLR1B-202ENST00000333990 NCKAP5O14513 1909 aa8.93□□□□□ -0.98
POLR1B-202ENST00000333990 NPBQ8NG41 125 aa8.93□□□□□ -0.98
POLR1B-202ENST00000333990 IGLV1-47P01700 117 aa8.93□□□□□ -0.98
POLR1B-202ENST00000333990 SMIM12Q96EX1 92 aa8.93□□□□□ -0.98
POLR1B-202ENST00000333990 RCHY1Q96PM5 261 aa8.93□□□□□ -0.98
POLR1B-202ENST00000333990 TMEM242Q9NWH2 141 aa8.93□□□□□ -0.98
POLR1B-202ENST00000333990 PRSS57Q6UWY2 283 aa8.92□□□□□ -0.98
POLR1B-202ENST00000333990 NXT2Q9NPJ8 142 aaKnown RBP8.92□□□□□ -0.98
POLR1B-202ENST00000333990 H3BVH4 76 aa8.92□□□□□ -0.98
POLR1B-202ENST00000333990 APOHP02749 345 aaPredicted RBP8.92□□□□□ -0.98
POLR1B-202ENST00000333990 IGLC1P0CG04 106 aa8.92□□□□□ -0.98
POLR1B-202ENST00000333990 NMUP48645 174 aa8.92□□□□□ -0.98
POLR1B-202ENST00000333990 SUMO2P61956 95 aaKnown RBP8.92□□□□□ -0.98
POLR1B-202ENST00000333990 C19orf84I3L1E1 186 aa8.92□□□□□ -0.98
POLR1B-202ENST00000333990 RPL35AP18077 110 aaKnown RBP8.92□□□□□ -0.98
POLR1B-202ENST00000333990 NUDT10Q8NFP7 164 aa8.92□□□□□ -0.98
POLR1B-202ENST00000333990 NUDT11Q96G61 164 aa8.92□□□□□ -0.98
POLR1B-202ENST00000333990 PRADC1Q9BSG0 188 aa8.92□□□□□ -0.98
POLR1B-202ENST00000333990 CHD3Q12873 2000 aaKnown RBP8.92□□□□□ -0.98
POLR1B-202ENST00000333990 A0A087X0M5 115 aa8.91□□□□□ -0.98
POLR1B-202ENST00000333990 IGKV3OR2-268A0A0C4DH90 116 aa8.91□□□□□ -0.98
POLR1B-202ENST00000333990 A0A1B0GX30 115 aa8.91□□□□□ -0.98
POLR1B-202ENST00000333990 IGLC7A0M8Q6 106 aa8.91□□□□□ -0.98
POLR1B-202ENST00000333990 FOXE3Q13461 319 aa8.91□□□□□ -0.98
POLR1B-202ENST00000333990 MST1LQ2TV78 715 aa8.91□□□□□ -0.98
POLR1B-202ENST00000333990 ZNF256Q9Y2P7 627 aaPredicted RBP8.91□□□□□ -0.98
POLR1B-202ENST00000333990 TMEM238LA0A1B0GVL6 79 aa8.91□□□□□ -0.98
POLR1B-202ENST00000333990 A6NJY4 79 aa8.91□□□□□ -0.98
POLR1B-202ENST00000333990 THAP8Q8NA92 274 aa8.91□□□□□ -0.98
POLR1B-202ENST00000333990 PAM16Q9Y3D7 125 aa8.91□□□□□ -0.98
POLR1B-202ENST00000333990 TRAV12-3A0A0B4J271 114 aa8.91□□□□□ -0.98
POLR1B-202ENST00000333990 PGPEP1LA6NFU8 196 aa8.91□□□□□ -0.98
POLR1B-202ENST00000333990 LGALS3P17931 250 aaKnown RBP8.91□□□□□ -0.98
POLR1B-202ENST00000333990 SCGB3A1Q96QR1 104 aa8.91□□□□□ -0.98
POLR1B-202ENST00000333990 ALKBH7Q9BT30 221 aaPredicted RBP8.91□□□□□ -0.98
POLR1B-202ENST00000333990 DYSFO75923 2080 aa8.91□□□□□ -0.98
POLR1B-202ENST00000333990 EML6Q6ZMW3 1958 aa8.91□□□□□ -0.98
POLR1B-202ENST00000333990 LINC01551Q86U37 167 aa8.91□□□□□ -0.98
POLR1B-202ENST00000333990 OR4C5Q8NGB2 326 aa8.91□□□□□ -0.98
POLR1B-202ENST00000333990 A6NDN8 102 aa8.9□□□□□ -0.98
POLR1B-202ENST00000333990 LGALS1P09382 135 aaKnown RBP8.9□□□□□ -0.98
POLR1B-202ENST00000333990 WFDC12Q8WWY7 111 aa8.9□□□□□ -0.98
POLR1B-202ENST00000333990 TMEM14CQ9P0S9 112 aa8.9□□□□□ -0.98
POLR1B-202ENST00000333990 PPIFP30405 207 aaKnown RBP8.9□□□□□ -0.98
POLR1B-202ENST00000333990 COTL1Q14019 142 aa8.9□□□□□ -0.98
POLR1B-202ENST00000333990 ZNF414Q96IQ9 312 aa8.9□□□□□ -0.98
POLR1B-202ENST00000333990 CDX1P47902 265 aaPredicted RBP8.9□□□□□ -0.99
POLR1B-202ENST00000333990 PSMB2P49721 201 aa8.9□□□□□ -0.99
POLR1B-202ENST00000333990 RPL36AP83881 106 aaKnown RBP8.9□□□□□ -0.99
POLR1B-202ENST00000333990 ORMDL2Q53FV1 153 aa8.9□□□□□ -0.99
POLR1B-202ENST00000333990 RPL36ALQ969Q0 106 aaKnown RBP8.9□□□□□ -0.99
POLR1B-202ENST00000333990 SIRPDQ9H106 197 aa8.9□□□□□ -0.99
POLR1B-202ENST00000333990 PRO1933Q9H354 126 aa8.9□□□□□ -0.99
POLR1B-202ENST00000333990 HIVEP3Q5T1R4 2406 aa8.9□□□□□ -0.99
POLR1B-202ENST00000333990 TRBV19A0A075B6N1 114 aa8.89□□□□□ -0.99
POLR1B-202ENST00000333990 H3BRM9 83 aa8.89□□□□□ -0.99
POLR1B-202ENST00000333990 ZFP36P26651 326 aaKnown RBP8.89□□□□□ -0.99
POLR1B-202ENST00000333990 IFI27P40305 119 aaPredicted RBP8.89□□□□□ -0.99
POLR1B-202ENST00000333990 LMO4P61968 165 aa8.89□□□□□ -0.99
POLR1B-202ENST00000333990 TMEM86BQ8N661 226 aa8.89□□□□□ -0.99
POLR1B-202ENST00000333990 Q8TAT8 98 aa8.89□□□□□ -0.99
POLR1B-202ENST00000333990 IGHV7-81A0A0B4J1V7 117 aa8.89□□□□□ -0.99
POLR1B-202ENST00000333990 IGHV7-4-1A0A0J9YVY3 117 aa8.89□□□□□ -0.99
POLR1B-202ENST00000333990 RASL11AQ6T310 242 aa8.89□□□□□ -0.99
POLR1B-202ENST00000333990 GNB1LQ9BYB4 327 aa8.89□□□□□ -0.99
POLR1B-202ENST00000333990 SELENOKQ9Y6D0 94 aa8.89□□□□□ -0.99
POLR1B-202ENST00000333990 TRGV1A0A0A0MS02 117 aa8.89□□□□□ -0.99
POLR1B-202ENST00000333990 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.89□□□□□ -0.99
POLR1B-202ENST00000333990 H3BRN7 92 aa8.89□□□□□ -0.99
POLR1B-202ENST00000333990 OR11H2Q8NH07 326 aa8.89□□□□□ -0.99
POLR1B-202ENST00000333990 SRSF1Q07955 248 aaKnown RBP eCLIP8.88□□□□□ -0.996e-9■■■□□ 17
POLR1B-202ENST00000333990 ERASQ7Z444 233 aa8.88□□□□□ -0.99
POLR1B-202ENST00000333990 CYSLTR1Q9Y271 337 aa8.88□□□□□ -0.99
POLR1B-202ENST00000333990 WDR87Q6ZQQ6 2873 aa8.88□□□□□ -0.99
POLR1B-202ENST00000333990 PRSS2P07478 247 aa8.88□□□□□ -0.99
POLR1B-202ENST00000333990 MEIG1Q5JSS6 88 aa8.88□□□□□ -0.99
POLR1B-202ENST00000333990 Q86TA4 180 aa8.88□□□□□ -0.99
POLR1B-202ENST00000333990 Q8N7P7 452 aa8.88□□□□□ -0.99
POLR1B-202ENST00000333990 UBE2E2Q96LR5 201 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 158.4 ms