RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 ZNF98A6NK75 572 aa6.78□□□□□ -1.32
LSAMP-201ENST00000333617 LINC01548A6NM66 108 aa6.78□□□□□ -1.32
LSAMP-201ENST00000333617 G3V318 75 aa6.78□□□□□ -1.32
LSAMP-201ENST00000333617 MRPS12O15235 138 aaKnown RBP6.78□□□□□ -1.32
LSAMP-201ENST00000333617 TCRAP04437 139 aa6.78□□□□□ -1.32
LSAMP-201ENST00000333617 IGLC2P0DOY2 106 aa6.78□□□□□ -1.32
LSAMP-201ENST00000333617 S100A7P31151 101 aa6.78□□□□□ -1.32
LSAMP-201ENST00000333617 RHOGP84095 191 aa6.78□□□□□ -1.32
LSAMP-201ENST00000333617 RPL19P84098 196 aaKnown RBP6.78□□□□□ -1.32
LSAMP-201ENST00000333617 FAM231DQ6ZW35 169 aa6.78□□□□□ -1.32
LSAMP-201ENST00000333617 OR8I2Q8N0Y5 310 aa6.78□□□□□ -1.32
LSAMP-201ENST00000333617 LYPD1Q8N2G4 141 aa6.78□□□□□ -1.32
LSAMP-201ENST00000333617 ZNF502Q8TBZ5 544 aa6.78□□□□□ -1.32
LSAMP-201ENST00000333617 C12orf57Q99622 126 aa6.78□□□□□ -1.32
LSAMP-201ENST00000333617 SERTAD4Q9NUC0 356 aa6.78□□□□□ -1.32
LSAMP-201ENST00000333617 GAR1Q9NY12 217 aaKnown RBP6.78□□□□□ -1.32
LSAMP-201ENST00000333617 FASNP49327 2511 aaKnown RBP6.78□□□□□ -1.32
LSAMP-201ENST00000333617 TRBV19A0A075B6N1 114 aa6.78□□□□□ -1.32
LSAMP-201ENST00000333617 TRAV41A0A0B4J266 112 aa6.78□□□□□ -1.32
LSAMP-201ENST00000333617 SMIM27A0A1W2PRY6 76 aa6.78□□□□□ -1.32
LSAMP-201ENST00000333617 ZNF705GA8MUZ8 300 aaPredicted RBP6.78□□□□□ -1.32
LSAMP-201ENST00000333617 SMIM6P0DI80 62 aa6.78□□□□□ -1.32
LSAMP-201ENST00000333617 S100A2P29034 98 aa6.78□□□□□ -1.32
LSAMP-201ENST00000333617 GPR183P32249 361 aa6.78□□□□□ -1.32
LSAMP-201ENST00000333617 BCL6BQ8N143 479 aaPredicted RBP6.78□□□□□ -1.32
LSAMP-201ENST00000333617 HIST3H2BBQ8N257 126 aa6.78□□□□□ -1.32
LSAMP-201ENST00000333617 EXOC3-AS1Q8N2X6 119 aa6.78□□□□□ -1.32
LSAMP-201ENST00000333617 LINC01356Q8N9X3 169 aa6.78□□□□□ -1.32
LSAMP-201ENST00000333617 EEF1AKMT3Q96AZ1 226 aa6.78□□□□□ -1.32
LSAMP-201ENST00000333617 SGK494Q96LW2 274 aa6.78□□□□□ -1.32
LSAMP-201ENST00000333617 GPR82Q96P67 336 aa6.78□□□□□ -1.32
LSAMP-201ENST00000333617 CHRDL1Q9BU40 450 aa6.78□□□□□ -1.32
LSAMP-201ENST00000333617 RABAC1Q9UI14 185 aa6.78□□□□□ -1.32
LSAMP-201ENST00000333617 XKRY2A2RUG3 117 aa6.77□□□□□ -1.33
LSAMP-201ENST00000333617 H3BUX3 64 aa6.77□□□□□ -1.33
LSAMP-201ENST00000333617 BMPR1BO00238 502 aa6.77□□□□□ -1.33
LSAMP-201ENST00000333617 GATCO43716 136 aaKnown RBP6.77□□□□□ -1.33
LSAMP-201ENST00000333617 AMY1AP04745 511 aa6.77□□□□□ -1.33
LSAMP-201ENST00000333617 CLEC3BP05452 202 aa6.77□□□□□ -1.33
LSAMP-201ENST00000333617 CRIP2P52943 208 aaPredicted RBP6.77□□□□□ -1.33
LSAMP-201ENST00000333617 LY6EQ16553 131 aa6.77□□□□□ -1.33
LSAMP-201ENST00000333617 C9orf152Q5JTZ5 239 aa6.77□□□□□ -1.33
LSAMP-201ENST00000333617 GFI1BQ5VTD9 330 aa6.77□□□□□ -1.33
LSAMP-201ENST00000333617 PRR27Q6MZM9 219 aa6.77□□□□□ -1.33
LSAMP-201ENST00000333617 NUDT10Q8NFP7 164 aa6.77□□□□□ -1.33
LSAMP-201ENST00000333617 NUDT11Q96G61 164 aa6.77□□□□□ -1.33
LSAMP-201ENST00000333617 GRAMD2BQ96HH9 432 aa6.77□□□□□ -1.33
LSAMP-201ENST00000333617 ZNF414Q96IQ9 312 aa6.77□□□□□ -1.33
LSAMP-201ENST00000333617 C17orf77Q96MU5 243 aa6.77□□□□□ -1.33
LSAMP-201ENST00000333617 SOX21Q9Y651 276 aaPredicted RBP6.77□□□□□ -1.33
LSAMP-201ENST00000333617 TLN2Q9Y4G6 2542 aa6.77□□□□□ -1.33
LSAMP-201ENST00000333617 ITPR3Q14573 2671 aa6.76□□□□□ -1.33
LSAMP-201ENST00000333617 TRBV7-1A0A0A6YYK4 115 aa6.76□□□□□ -1.33
LSAMP-201ENST00000333617 A6NDX4 124 aa6.76□□□□□ -1.33
LSAMP-201ENST00000333617 IFITM10A6NMD0 228 aa6.76□□□□□ -1.33
LSAMP-201ENST00000333617 K7EQM0 130 aa6.76□□□□□ -1.33
LSAMP-201ENST00000333617 M0QZK8 103 aa6.76□□□□□ -1.33
LSAMP-201ENST00000333617 LTAP01374 205 aa6.76□□□□□ -1.33
LSAMP-201ENST00000333617 RPL7P18124 248 aaKnown RBP6.76□□□□□ -1.33
LSAMP-201ENST00000333617 TCL1AP56279 114 aa6.76□□□□□ -1.33
LSAMP-201ENST00000333617 ATP5G2Q06055 141 aa6.76□□□□□ -1.33
LSAMP-201ENST00000333617 PDE6HQ13956 83 aa6.76□□□□□ -1.33
LSAMP-201ENST00000333617 C19orf54Q5BKX5 351 aa6.76□□□□□ -1.33
LSAMP-201ENST00000333617 PDZD11Q5EBL8 140 aa6.76□□□□□ -1.33
LSAMP-201ENST00000333617 CLEC19AQ6UXS0 136 aa6.76□□□□□ -1.33
LSAMP-201ENST00000333617 SIGLEC15Q6ZMC9 328 aa6.76□□□□□ -1.33
LSAMP-201ENST00000333617 GOLT1AQ6ZVE7 132 aa6.76□□□□□ -1.33
LSAMP-201ENST00000333617 TMEM183AQ8IXX5 376 aa6.76□□□□□ -1.33
LSAMP-201ENST00000333617 MS4A10Q96PG2 267 aa6.76□□□□□ -1.33
LSAMP-201ENST00000333617 MLST8Q9BVC4 326 aa6.76□□□□□ -1.33
LSAMP-201ENST00000333617 GPR61Q9BZJ8 451 aa6.76□□□□□ -1.33
LSAMP-201ENST00000333617 AAMDCQ9H7C9 122 aa6.76□□□□□ -1.33
LSAMP-201ENST00000333617 GNB4Q9HAV0 340 aa6.76□□□□□ -1.33
LSAMP-201ENST00000333617 A0A096LNT2 108 aa6.75□□□□□ -1.33
LSAMP-201ENST00000333617 TRBV6-1A0A0K0K1D8 114 aa6.75□□□□□ -1.33
LSAMP-201ENST00000333617 IZUMO1RA6ND01 250 aa6.75□□□□□ -1.33
LSAMP-201ENST00000333617 FAM223BA6NKX1 122 aa6.75□□□□□ -1.33
LSAMP-201ENST00000333617 CBLN1P23435 193 aa6.75□□□□□ -1.33
LSAMP-201ENST00000333617 IER3P46695 156 aa6.75□□□□□ -1.33
LSAMP-201ENST00000333617 PSG9Q00887 426 aa6.75□□□□□ -1.33
LSAMP-201ENST00000333617 COX19Q49B96 90 aa6.75□□□□□ -1.33
LSAMP-201ENST00000333617 COA6Q5JTJ3 125 aaKnown RBP6.75□□□□□ -1.33
LSAMP-201ENST00000333617 WDR73Q6P4I2 378 aa6.75□□□□□ -1.33
LSAMP-201ENST00000333617 TOMM20LQ6UXN7 152 aa6.75□□□□□ -1.33
LSAMP-201ENST00000333617 Q86TA4 180 aa6.75□□□□□ -1.33
LSAMP-201ENST00000333617 FAM223AQ8IWN6 122 aa6.75□□□□□ -1.33
LSAMP-201ENST00000333617 TMEM75Q8N9X5 138 aa6.75□□□□□ -1.33
LSAMP-201ENST00000333617 MBD6Q96DN6 1003 aa6.75□□□□□ -1.33
LSAMP-201ENST00000333617 CCDC140Q96MF4 163 aa6.75□□□□□ -1.33
LSAMP-201ENST00000333617 ZNF492Q9P255 531 aa6.75□□□□□ -1.33
LSAMP-201ENST00000333617 TRAV8-1A0A0A6YYK1 113 aa6.74□□□□□ -1.33
LSAMP-201ENST00000333617 IGHV3-35A0A0C4DH35 117 aa6.74□□□□□ -1.33
LSAMP-201ENST00000333617 SNURFLB1AK76 121 aa6.74□□□□□ -1.33
LSAMP-201ENST00000333617 J3QLI3 93 aa6.74□□□□□ -1.33
LSAMP-201ENST00000333617 SPINK4O60575 86 aa6.74□□□□□ -1.33
LSAMP-201ENST00000333617 CA1P00915 261 aaPredicted RBP6.74□□□□□ -1.33
LSAMP-201ENST00000333617 IGLV2-11P01706 119 aa6.74□□□□□ -1.33
LSAMP-201ENST00000333617 IGHG2P01859 326 aa6.74□□□□□ -1.33
LSAMP-201ENST00000333617 IGF1P05019 195 aa6.74□□□□□ -1.33
LSAMP-201ENST00000333617 SLC35B1P78383 322 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms