RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 ONECUT1Q9UBC0 465 aa9.73□□□□□ -0.85
VPS33B-201ENST00000333371 CELSR1Q9NYQ6 3014 aa9.73□□□□□ -0.85
VPS33B-201ENST00000333371 TMSB15BA0A087X1C1 80 aa9.72□□□□□ -0.85
VPS33B-201ENST00000333371 PPIAL4CA0A0B4J2A2 164 aa9.72□□□□□ -0.85
VPS33B-201ENST00000333371 K7EIM0 57 aa9.72□□□□□ -0.85
VPS33B-201ENST00000333371 PPIAL4GP0DN37 164 aa9.72□□□□□ -0.85
VPS33B-201ENST00000333371 CRIP1P50238 77 aa9.72□□□□□ -0.85
VPS33B-201ENST00000333371 FOXE3Q13461 319 aa9.72□□□□□ -0.85
VPS33B-201ENST00000333371 MPV17L2Q567V2 206 aa9.72□□□□□ -0.85
VPS33B-201ENST00000333371 CT83Q5H943 113 aa9.72□□□□□ -0.85
VPS33B-201ENST00000333371 FAM106CPP0CH98 169 aa9.72□□□□□ -0.85
VPS33B-201ENST00000333371 HTR1DP28221 377 aa9.72□□□□□ -0.85
VPS33B-201ENST00000333371 PTTG1IPP53801 180 aa9.72□□□□□ -0.85
VPS33B-201ENST00000333371 FBXL19-AS1Q494R0 122 aa9.72□□□□□ -0.85
VPS33B-201ENST00000333371 FAM106AQ4KMX7 169 aa9.72□□□□□ -0.85
VPS33B-201ENST00000333371 C8orf49Q96NF6 230 aa9.72□□□□□ -0.85
VPS33B-201ENST00000333371 C20orf202A1L168 122 aa9.71□□□□□ -0.85
VPS33B-201ENST00000333371 IL4P05112 153 aa9.71□□□□□ -0.85
VPS33B-201ENST00000333371 KLRD1Q13241 179 aa9.71□□□□□ -0.85
VPS33B-201ENST00000333371 TRBV19A0A075B6N1 114 aa9.71□□□□□ -0.86
VPS33B-201ENST00000333371 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.71□□□□□ -0.86
VPS33B-201ENST00000333371 IGHV3-23P01764 117 aa9.71□□□□□ -0.86
VPS33B-201ENST00000333371 FCGR2BP31994 310 aaPredicted RBP9.71□□□□□ -0.86
VPS33B-201ENST00000333371 COX11Q9Y6N1 276 aa9.71□□□□□ -0.86
VPS33B-201ENST00000333371 FXYD7P58549 80 aa9.7□□□□□ -0.86
VPS33B-201ENST00000333371 ARF6P62330 175 aa9.7□□□□□ -0.86
VPS33B-201ENST00000333371 SIGLEC15Q6ZMC9 328 aa9.7□□□□□ -0.86
VPS33B-201ENST00000333371 CHCHD1Q96BP2 118 aaKnown RBP9.7□□□□□ -0.86
VPS33B-201ENST00000333371 GFRA4Q9GZZ7 299 aa9.7□□□□□ -0.86
VPS33B-201ENST00000333371 HAX1O00165 279 aa9.7□□□□□ -0.86
VPS33B-201ENST00000333371 CRXO43186 299 aaPredicted RBP9.7□□□□□ -0.86
VPS33B-201ENST00000333371 SNAI2O43623 268 aa9.7□□□□□ -0.86
VPS33B-201ENST00000333371 TCTAP57738 103 aa9.7□□□□□ -0.86
VPS33B-201ENST00000333371 ZNF491Q8N8L2 437 aa9.7□□□□□ -0.86
VPS33B-201ENST00000333371 NDFIP1Q9BT67 221 aa9.7□□□□□ -0.86
VPS33B-201ENST00000333371 PSG8Q9UQ74 426 aa9.7□□□□□ -0.86
VPS33B-201ENST00000333371 IGHV3OR16-8A0A075B7F1 116 aa9.69□□□□□ -0.86
VPS33B-201ENST00000333371 A0A1B0GUT8 65 aa9.69□□□□□ -0.86
VPS33B-201ENST00000333371 HLA-DRB1P01911 266 aa9.69□□□□□ -0.86
VPS33B-201ENST00000333371 HOXB4P17483 251 aaPredicted RBP9.69□□□□□ -0.86
VPS33B-201ENST00000333371 ADORA2A-AS1P86434 159 aa9.69□□□□□ -0.86
VPS33B-201ENST00000333371 SHANK2-AS3Q9BTD1 123 aa9.69□□□□□ -0.86
VPS33B-201ENST00000333371 TMEM14CQ9P0S9 112 aa9.69□□□□□ -0.86
VPS33B-201ENST00000333371 SOX21Q9Y651 276 aaPredicted RBP9.69□□□□□ -0.86
VPS33B-201ENST00000333371 NCR2O95944 276 aa9.69□□□□□ -0.86
VPS33B-201ENST00000333371 LOXL1Q08397 574 aaPredicted RBP9.69□□□□□ -0.86
VPS33B-201ENST00000333371 ZNF672Q499Z4 452 aaPredicted RBP9.69□□□□□ -0.86
VPS33B-201ENST00000333371 IGFL4Q6B9Z1 124 aa9.69□□□□□ -0.86
VPS33B-201ENST00000333371 BPIFA4PQ86YQ2 179 aa9.69□□□□□ -0.86
VPS33B-201ENST00000333371 RNASE8Q8TDE3 154 aaKnown RBP9.69□□□□□ -0.86
VPS33B-201ENST00000333371 ORAOV1Q8WV07 137 aa9.69□□□□□ -0.86
VPS33B-201ENST00000333371 NEU4Q8WWR8 484 aaPredicted RBP9.69□□□□□ -0.86
VPS33B-201ENST00000333371 RNF125Q96EQ8 232 aa9.69□□□□□ -0.86
VPS33B-201ENST00000333371 LOC389332A0A1B0GUA5 103 aa9.69□□□□□ -0.86
VPS33B-201ENST00000333371 H3BRN7 92 aa9.69□□□□□ -0.86
VPS33B-201ENST00000333371 NUDT3O95989 172 aa9.69□□□□□ -0.86
VPS33B-201ENST00000333371 C16orf54Q6UWD8 224 aa9.69□□□□□ -0.86
VPS33B-201ENST00000333371 TNFRSF14Q92956 283 aa9.69□□□□□ -0.86
VPS33B-201ENST00000333371 CHD8Q9HCK8 2581 aa9.68□□□□□ -0.86
VPS33B-201ENST00000333371 NCOR2Q9Y618 2525 aa9.68□□□□□ -0.86
VPS33B-201ENST00000333371 TMEM213A2RRL7 107 aa9.68□□□□□ -0.86
VPS33B-201ENST00000333371 LY6LH3BQJ8 138 aa9.68□□□□□ -0.86
VPS33B-201ENST00000333371 CDSNQ15517 529 aa9.68□□□□□ -0.86
VPS33B-201ENST00000333371 ZNF738Q8NE65 137 aa9.68□□□□□ -0.86
VPS33B-201ENST00000333371 SERTM2A0A1B0GWG4 89 aa9.68□□□□□ -0.86
VPS33B-201ENST00000333371 HES1Q14469 280 aa9.68□□□□□ -0.86
VPS33B-201ENST00000333371 ZNF414Q96IQ9 312 aa9.68□□□□□ -0.86
VPS33B-201ENST00000333371 MAP1LC3CQ9BXW4 147 aa9.68□□□□□ -0.86
VPS33B-201ENST00000333371 VPS13CQ709C8 3753 aa9.68□□□□□ -0.86
VPS33B-201ENST00000333371 A0A087X0K7 114 aa9.67□□□□□ -0.86
VPS33B-201ENST00000333371 IGHV3-35A0A0C4DH35 117 aa9.67□□□□□ -0.86
VPS33B-201ENST00000333371 MRPS12O15235 138 aaKnown RBP9.67□□□□□ -0.86
VPS33B-201ENST00000333371 LIPFP07098 398 aa9.67□□□□□ -0.86
VPS33B-201ENST00000333371 PAX2Q02962 417 aa9.67□□□□□ -0.86
VPS33B-201ENST00000333371 PSG3Q16557 428 aa9.67□□□□□ -0.86
VPS33B-201ENST00000333371 LOC105371242A0A075B767 164 aa9.67□□□□□ -0.86
VPS33B-201ENST00000333371 FAM231BA6NCW3 169 aa9.67□□□□□ -0.86
VPS33B-201ENST00000333371 IFI27P40305 119 aaPredicted RBP9.67□□□□□ -0.86
VPS33B-201ENST00000333371 TMEM191AQ9H0A3 160 aa9.67□□□□□ -0.86
VPS33B-201ENST00000333371 ST20Q9HBF5 79 aa9.67□□□□□ -0.86
VPS33B-201ENST00000333371 IGKV2-40A0A087WW87 121 aaPredicted RBP9.66□□□□□ -0.86
VPS33B-201ENST00000333371 IGKV2D-40P01614 121 aaPredicted RBP9.66□□□□□ -0.86
VPS33B-201ENST00000333371 OR5AL1P0C617 328 aa9.66□□□□□ -0.86
VPS33B-201ENST00000333371 UBE2V1Q13404 147 aa9.66□□□□□ -0.86
VPS33B-201ENST00000333371 LY6DQ14210 128 aa9.66□□□□□ -0.86
VPS33B-201ENST00000333371 FAM162BQ5T6X4 162 aa9.66□□□□□ -0.86
VPS33B-201ENST00000333371 TMEM75Q8N9X5 138 aa9.66□□□□□ -0.86
VPS33B-201ENST00000333371 AP5S1Q9NUS5 200 aa9.66□□□□□ -0.86
VPS33B-201ENST00000333371 MAP1AP78559 2803 aaPredicted RBP9.66□□□□□ -0.86
VPS33B-201ENST00000333371 NBR2O15453 112 aa9.66□□□□□ -0.86
VPS33B-201ENST00000333371 NDPQ00604 133 aa9.66□□□□□ -0.86
VPS33B-201ENST00000333371 SLC25A34Q6PIV7 304 aa9.66□□□□□ -0.86
VPS33B-201ENST00000333371 Q8TAT8 98 aa9.66□□□□□ -0.86
VPS33B-201ENST00000333371 RAB1BQ9H0U4 201 aa9.66□□□□□ -0.86
VPS33B-201ENST00000333371 CBY3A6NI87 242 aa9.65□□□□□ -0.86
VPS33B-201ENST00000333371 D6R8Y8 96 aa9.65□□□□□ -0.86
VPS33B-201ENST00000333371 GNG7O60262 68 aa9.65□□□□□ -0.86
VPS33B-201ENST00000333371 HLA-DMBP28068 263 aa9.65□□□□□ -0.86
VPS33B-201ENST00000333371 LYZL1Q6UWQ5 148 aa9.65□□□□□ -0.86
VPS33B-201ENST00000333371 AMN1Q8IY45 258 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms