RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 CST9LP1Q5W188 147 aa9.16□□□□□ -0.94
TRIM49B-201ENST00000332682 ADAMTSL5Q6ZMM2 481 aa9.16□□□□□ -0.94
TRIM49B-201ENST00000332682 SMDT1Q9H4I9 107 aa9.16□□□□□ -0.94
TRIM49B-201ENST00000332682 TREM1Q9NP99 234 aa9.16□□□□□ -0.94
TRIM49B-201ENST00000332682 PEMTQ9UBM1 199 aa9.16□□□□□ -0.94
TRIM49B-201ENST00000332682 FOLR2P14207 255 aa9.15□□□□□ -0.94
TRIM49B-201ENST00000332682 BMI1P35226 326 aa9.15□□□□□ -0.94
TRIM49B-201ENST00000332682 MYCNOSP40205 109 aa9.15□□□□□ -0.94
TRIM49B-201ENST00000332682 RANP62826 216 aaKnown RBP9.15□□□□□ -0.94
TRIM49B-201ENST00000332682 PDE6HQ13956 83 aa9.15□□□□□ -0.94
TRIM49B-201ENST00000332682 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.15□□□□□ -0.94
TRIM49B-201ENST00000332682 CCDC28AQ8IWP9 274 aa9.15□□□□□ -0.94
TRIM49B-201ENST00000332682 TXNDC17Q9BRA2 123 aa9.15□□□□□ -0.94
TRIM49B-201ENST00000332682 ELOVL1Q9BW60 279 aa9.15□□□□□ -0.94
TRIM49B-201ENST00000332682 SRP19P09132 144 aaKnown RBP9.15□□□□□ -0.95
TRIM49B-201ENST00000332682 Q9H3A6 140 aa9.15□□□□□ -0.95
TRIM49B-201ENST00000332682 SELENOKQ9Y6D0 94 aa9.15□□□□□ -0.95
TRIM49B-201ENST00000332682 HELTA6NFD8 242 aa9.14□□□□□ -0.95
TRIM49B-201ENST00000332682 ZNF785A8K8V0 405 aa9.14□□□□□ -0.95
TRIM49B-201ENST00000332682 OVOL1O14753 267 aa9.14□□□□□ -0.95
TRIM49B-201ENST00000332682 ZNF253O75346 499 aa9.14□□□□□ -0.95
TRIM49B-201ENST00000332682 CSN3P07498 182 aa9.14□□□□□ -0.95
TRIM49B-201ENST00000332682 SFTA3P0C7M3 94 aa9.14□□□□□ -0.95
TRIM49B-201ENST00000332682 SUMO1P63165 101 aaKnown RBP9.14□□□□□ -0.95
TRIM49B-201ENST00000332682 CYB561D1Q8N8Q1 229 aa9.14□□□□□ -0.95
TRIM49B-201ENST00000332682 NKX6-2Q9C056 277 aaPredicted RBP9.14□□□□□ -0.95
TRIM49B-201ENST00000332682 SLC35B3Q9H1N7 401 aa9.14□□□□□ -0.95
TRIM49B-201ENST00000332682 MLXQ9UH92 298 aa9.14□□□□□ -0.95
TRIM49B-201ENST00000332682 TMEM218A2RU14 115 aa9.13□□□□□ -0.95
TRIM49B-201ENST00000332682 TMEM250H0YL14 139 aa9.13□□□□□ -0.95
TRIM49B-201ENST00000332682 M0QZ24 198 aa9.13□□□□□ -0.95
TRIM49B-201ENST00000332682 PDE6DO43924 150 aa9.13□□□□□ -0.95
TRIM49B-201ENST00000332682 NDUFS6O75380 124 aaKnown RBP9.13□□□□□ -0.95
TRIM49B-201ENST00000332682 ADCYAP1P18509 176 aa9.13□□□□□ -0.95
TRIM49B-201ENST00000332682 MEOX2P50222 304 aa9.13□□□□□ -0.95
TRIM49B-201ENST00000332682 FAM90A2PQ658T7 463 aa9.13□□□□□ -0.95
TRIM49B-201ENST00000332682 TCF24Q7RTU0 167 aa9.13□□□□□ -0.95
TRIM49B-201ENST00000332682 LYPD1Q8N2G4 141 aa9.13□□□□□ -0.95
TRIM49B-201ENST00000332682 EXOC3-AS1Q8N2X6 119 aa9.13□□□□□ -0.95
TRIM49B-201ENST00000332682 ZNF331Q9NQX6 463 aaPredicted RBP9.13□□□□□ -0.95
TRIM49B-201ENST00000332682 OTORQ9NRC9 128 aa9.13□□□□□ -0.95
TRIM49B-201ENST00000332682 SCO2A0A1W2PP80 73 aa9.12□□□□□ -0.95
TRIM49B-201ENST00000332682 PGPA6NDG6 321 aa9.12□□□□□ -0.95
TRIM49B-201ENST00000332682 F6UZH7 168 aa9.12□□□□□ -0.95
TRIM49B-201ENST00000332682 PSG9Q00887 426 aa9.12□□□□□ -0.95
TRIM49B-201ENST00000332682 TMEM158Q8WZ71 300 aa9.12□□□□□ -0.95
TRIM49B-201ENST00000332682 C11orf52Q96A22 123 aa9.12□□□□□ -0.95
TRIM49B-201ENST00000332682 LINC00052Q96N35 136 aa9.12□□□□□ -0.95
TRIM49B-201ENST00000332682 SLC50A1Q9BRV3 221 aa9.12□□□□□ -0.95
TRIM49B-201ENST00000332682 ZNF747Q9BV97 191 aa9.12□□□□□ -0.95
TRIM49B-201ENST00000332682 NRN1Q9NPD7 142 aa9.12□□□□□ -0.95
TRIM49B-201ENST00000332682 SOCS3O14543 225 aa9.11□□□□□ -0.95
TRIM49B-201ENST00000332682 PF4P02776 101 aa9.11□□□□□ -0.95
TRIM49B-201ENST00000332682 CEBPGP53567 150 aa9.11□□□□□ -0.95
TRIM49B-201ENST00000332682 RPL11P62913 178 aaKnown RBP9.11□□□□□ -0.95
TRIM49B-201ENST00000332682 LINC00482Q8N8I6 264 aa9.11□□□□□ -0.95
TRIM49B-201ENST00000332682 C5orf17Q8NAS9 161 aa9.11□□□□□ -0.95
TRIM49B-201ENST00000332682 TCEAL7Q9BRU2 100 aa9.11□□□□□ -0.95
TRIM49B-201ENST00000332682 SIGLEC8Q9NYZ4 499 aa9.11□□□□□ -0.95
TRIM49B-201ENST00000332682 STAB1Q9NY15 2570 aa9.11□□□□□ -0.95
TRIM49B-201ENST00000332682 IGKV3-7A0A075B6H7 116 aa9.1□□□□□ -0.95
TRIM49B-201ENST00000332682 TRAV8-2A0A0B4J237 113 aa9.1□□□□□ -0.95
TRIM49B-201ENST00000332682 M0R3E3 92 aa9.1□□□□□ -0.95
TRIM49B-201ENST00000332682 SLC25A5P05141 298 aaKnown RBP9.1□□□□□ -0.95
TRIM49B-201ENST00000332682 GNG5P63218 68 aa9.1□□□□□ -0.95
TRIM49B-201ENST00000332682 IGFL4Q6B9Z1 124 aa9.1□□□□□ -0.95
TRIM49B-201ENST00000332682 AAMDCQ9H7C9 122 aa9.1□□□□□ -0.95
TRIM49B-201ENST00000332682 COL6A5A8TX70 2615 aa9.1□□□□□ -0.95
TRIM49B-201ENST00000332682 KRBOX1C9JBD0 128 aa9.1□□□□□ -0.95
TRIM49B-201ENST00000332682 PEX7O00628 323 aa9.1□□□□□ -0.95
TRIM49B-201ENST00000332682 HLA-DMBP28068 263 aa9.1□□□□□ -0.95
TRIM49B-201ENST00000332682 SOHLH1Q5JUK2 328 aa9.1□□□□□ -0.95
TRIM49B-201ENST00000332682 TMEM61Q8N0U2 210 aa9.1□□□□□ -0.95
TRIM49B-201ENST00000332682 GBGT1Q8N5D6 347 aa9.1□□□□□ -0.95
TRIM49B-201ENST00000332682 RNF182Q8N6D2 247 aa9.1□□□□□ -0.95
TRIM49B-201ENST00000332682 CMTM2Q8TAZ6 248 aa9.1□□□□□ -0.95
TRIM49B-201ENST00000332682 DYNLRB2Q8TF09 96 aa9.1□□□□□ -0.95
TRIM49B-201ENST00000332682 C2CD4CQ8TF44 421 aa9.1□□□□□ -0.95
TRIM49B-201ENST00000332682 DCANP1Q8TF63 244 aa9.1□□□□□ -0.95
TRIM49B-201ENST00000332682 RPUSD4Q96CM3 377 aaKnown RBP9.1□□□□□ -0.95
TRIM49B-201ENST00000332682 DERL1Q9BUN8 251 aa9.1□□□□□ -0.95
TRIM49B-201ENST00000332682 MS4A6AQ9H2W1 248 aa9.1□□□□□ -0.95
TRIM49B-201ENST00000332682 EPDR1Q9UM22 224 aa9.1□□□□□ -0.95
TRIM49B-201ENST00000332682 VWFP04275 2813 aa9.09□□□□□ -0.95
TRIM49B-201ENST00000332682 F8W036 122 aa9.09□□□□□ -0.95
TRIM49B-201ENST00000332682 ISLRO14498 428 aa9.09□□□□□ -0.95
TRIM49B-201ENST00000332682 TCRAP04437 139 aa9.09□□□□□ -0.95
TRIM49B-201ENST00000332682 DEFB114Q30KQ6 69 aa9.09□□□□□ -0.95
TRIM49B-201ENST00000332682 C10orf91Q5T1B1 145 aa9.09□□□□□ -0.95
TRIM49B-201ENST00000332682 C12orf54Q6X4T0 127 aa9.09□□□□□ -0.95
TRIM49B-201ENST00000332682 C3orf56Q8N813 242 aa9.09□□□□□ -0.95
TRIM49B-201ENST00000332682 HIST1H2BAQ96A08 127 aa9.09□□□□□ -0.95
TRIM49B-201ENST00000332682 C16orf92Q96LL3 132 aa9.09□□□□□ -0.95
TRIM49B-201ENST00000332682 ATG101Q9BSB4 218 aa9.09□□□□□ -0.95
TRIM49B-201ENST00000332682 SEC11CQ9BY50 192 aa9.09□□□□□ -0.95
TRIM49B-201ENST00000332682 PARLQ9H300 379 aa9.09□□□□□ -0.95
TRIM49B-201ENST00000332682 RPH3ALQ9UNE2 315 aa9.09□□□□□ -0.95
TRIM49B-201ENST00000332682 ZNF674Q2M3X9 581 aa9.08□□□□□ -0.96
TRIM49B-201ENST00000332682 CD300EQ496F6 205 aaPredicted RBP9.08□□□□□ -0.96
TRIM49B-201ENST00000332682 SAMD13Q5VXD3 122 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms