RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 TMEM14EPQ6UXP3 125 aa10.35□□□□□ -0.75
CTHRC1-201ENST00000330295 NRARPQ7Z6K4 114 aa10.35□□□□□ -0.75
CTHRC1-201ENST00000330295 GLMPQ8WWB7 406 aa10.35□□□□□ -0.75
CTHRC1-201ENST00000330295 NIPSNAP3BQ9BS92 247 aa10.35□□□□□ -0.75
CTHRC1-201ENST00000330295 TMEM147Q9BVK8 224 aa10.35□□□□□ -0.75
CTHRC1-201ENST00000330295 KRTAP1-5Q9BYS1 174 aa10.35□□□□□ -0.75
CTHRC1-201ENST00000330295 NPVFQ9HCQ7 196 aa10.35□□□□□ -0.75
CTHRC1-201ENST00000330295 NRN1Q9NPD7 142 aa10.35□□□□□ -0.75
CTHRC1-201ENST00000330295 RNF24Q9Y225 148 aa10.35□□□□□ -0.75
CTHRC1-201ENST00000330295 RCL1Q9Y2P8 373 aaKnown RBP10.35□□□□□ -0.75
CTHRC1-201ENST00000330295 C7orf66A4D0T2 115 aa10.34□□□□□ -0.75
CTHRC1-201ENST00000330295 K7EPK0 472 aa10.34□□□□□ -0.75
CTHRC1-201ENST00000330295 K7EQG2 157 aa10.34□□□□□ -0.75
CTHRC1-201ENST00000330295 PAX9P55771 341 aa10.34□□□□□ -0.75
CTHRC1-201ENST00000330295 RAP2BP61225 183 aa10.34□□□□□ -0.75
CTHRC1-201ENST00000330295 RRAS2P62070 204 aaPredicted RBP10.34□□□□□ -0.75
CTHRC1-201ENST00000330295 OR8I2Q8N0Y5 310 aa10.34□□□□□ -0.75
CTHRC1-201ENST00000330295 SEPSECSQ9HD40 501 aaKnown RBP10.34□□□□□ -0.75
CTHRC1-201ENST00000330295 LRP1Q07954 4544 aaKnown RBP10.33□□□□□ -0.76
CTHRC1-201ENST00000330295 TEX48A0A1B0GUV7 120 aa10.33□□□□□ -0.76
CTHRC1-201ENST00000330295 TMEM189A5PLL7 270 aa10.33□□□□□ -0.76
CTHRC1-201ENST00000330295 ORM2P19652 201 aa10.33□□□□□ -0.76
CTHRC1-201ENST00000330295 ID1P41134 155 aa10.33□□□□□ -0.76
CTHRC1-201ENST00000330295 GALR1P47211 349 aa10.33□□□□□ -0.76
CTHRC1-201ENST00000330295 HBG1P69891 147 aa10.33□□□□□ -0.76
CTHRC1-201ENST00000330295 HBG2P69892 147 aa10.33□□□□□ -0.76
CTHRC1-201ENST00000330295 IFITM3Q01628 133 aa10.33□□□□□ -0.76
CTHRC1-201ENST00000330295 TEPPQ6URK8 271 aa10.33□□□□□ -0.76
CTHRC1-201ENST00000330295 CYP2G1PQ6ZSU1 146 aa10.33□□□□□ -0.76
CTHRC1-201ENST00000330295 STX12Q86Y82 276 aa10.33□□□□□ -0.76
CTHRC1-201ENST00000330295 GPR82Q96P67 336 aa10.33□□□□□ -0.76
CTHRC1-201ENST00000330295 MARVELD1Q9BSK0 173 aa10.33□□□□□ -0.76
CTHRC1-201ENST00000330295 DKK2Q9UBU2 259 aa10.33□□□□□ -0.76
CTHRC1-201ENST00000330295 IGKV1OR2-108A0A075B7D4 117 aa10.32□□□□□ -0.76
CTHRC1-201ENST00000330295 GOSR2O14653 212 aa10.32□□□□□ -0.76
CTHRC1-201ENST00000330295 SSNA1O43805 119 aa10.32□□□□□ -0.76
CTHRC1-201ENST00000330295 HYPMO75409 117 aa10.32□□□□□ -0.76
CTHRC1-201ENST00000330295 ZNF688P0C7X2 276 aa10.32□□□□□ -0.76
CTHRC1-201ENST00000330295 TTC32Q5I0X7 151 aa10.32□□□□□ -0.76
CTHRC1-201ENST00000330295 ZNF546Q86UE3 836 aa10.32□□□□□ -0.76
CTHRC1-201ENST00000330295 OR1B1Q8NGR6 318 aa10.32□□□□□ -0.76
CTHRC1-201ENST00000330295 DCANP1Q8TF63 244 aa10.32□□□□□ -0.76
CTHRC1-201ENST00000330295 KNCNA6PVL3 124 aa10.31□□□□□ -0.76
CTHRC1-201ENST00000330295 S100A11P31949 105 aa10.31□□□□□ -0.76
CTHRC1-201ENST00000330295 MEOX2P50222 304 aa10.31□□□□□ -0.76
CTHRC1-201ENST00000330295 CCL18P55774 89 aa10.31□□□□□ -0.76
CTHRC1-201ENST00000330295 HAMPP81172 84 aa10.31□□□□□ -0.76
CTHRC1-201ENST00000330295 SLC38A11Q08AI6 406 aa10.31□□□□□ -0.76
CTHRC1-201ENST00000330295 OXA1LQ15070 435 aa10.31□□□□□ -0.76
CTHRC1-201ENST00000330295 PXDC1Q5TGL8 231 aa10.31□□□□□ -0.76
CTHRC1-201ENST00000330295 FAM222AQ5U5X8 452 aa10.31□□□□□ -0.76
CTHRC1-201ENST00000330295 LINC00588Q9Y4M8 146 aa10.31□□□□□ -0.76
CTHRC1-201ENST00000330295 PMS2P5A8MQ11 134 aa10.3□□□□□ -0.76
CTHRC1-201ENST00000330295 IFNA5P01569 189 aa10.3□□□□□ -0.76
CTHRC1-201ENST00000330295 OR5G3P0C626 314 aa10.3□□□□□ -0.76
CTHRC1-201ENST00000330295 LINC00869P0C866 280 aa10.3□□□□□ -0.76
CTHRC1-201ENST00000330295 RAB32Q13637 225 aa10.3□□□□□ -0.76
CTHRC1-201ENST00000330295 PSMG4Q5JS54 123 aa10.3□□□□□ -0.76
CTHRC1-201ENST00000330295 NEU1Q99519 415 aa10.3□□□□□ -0.76
CTHRC1-201ENST00000330295 SLC25A31Q9H0C2 315 aa10.3□□□□□ -0.76
CTHRC1-201ENST00000330295 SLC25A22Q9H936 323 aa10.3□□□□□ -0.76
CTHRC1-201ENST00000330295 LYRM2Q9NU23 88 aaPredicted RBP10.3□□□□□ -0.76
CTHRC1-201ENST00000330295 HIGD1AQ9Y241 93 aa10.3□□□□□ -0.76
CTHRC1-201ENST00000330295 CCNKO75909 580 aa10.29□□□□□ -0.76
CTHRC1-201ENST00000330295 CST7O76096 145 aa10.29□□□□□ -0.76
CTHRC1-201ENST00000330295 PET100P0DJ07 73 aa10.29□□□□□ -0.76
CTHRC1-201ENST00000330295 GATA2P23769 480 aaPredicted RBP10.29□□□□□ -0.76
CTHRC1-201ENST00000330295 SULT1A1P50225 295 aa10.29□□□□□ -0.76
CTHRC1-201ENST00000330295 NUTF2P61970 127 aaKnown RBP10.29□□□□□ -0.76
CTHRC1-201ENST00000330295 ATP6V1FQ16864 119 aa10.29□□□□□ -0.76
CTHRC1-201ENST00000330295 ACTL10Q5JWF8 245 aa10.29□□□□□ -0.76
CTHRC1-201ENST00000330295 DEFB104AQ8WTQ1 72 aa10.29□□□□□ -0.76
CTHRC1-201ENST00000330295 C1QTNF4Q9BXJ3 329 aa10.29□□□□□ -0.76
CTHRC1-201ENST00000330295 NMES1Q9C002 83 aa10.29□□□□□ -0.76
CTHRC1-201ENST00000330295 Q9H8V8 135 aa10.29□□□□□ -0.76
CTHRC1-201ENST00000330295 UQCC1Q9NVA1 299 aa10.29□□□□□ -0.76
CTHRC1-201ENST00000330295 FAM24AA6NFZ4 105 aa10.28□□□□□ -0.76
CTHRC1-201ENST00000330295 ZNF98A6NK75 572 aa10.28□□□□□ -0.76
CTHRC1-201ENST00000330295 E5RGE8 158 aa10.28□□□□□ -0.76
CTHRC1-201ENST00000330295 ISLRO14498 428 aa10.28□□□□□ -0.76
CTHRC1-201ENST00000330295 EREGO14944 169 aa10.28□□□□□ -0.76
CTHRC1-201ENST00000330295 RPL7P18124 248 aaKnown RBP10.28□□□□□ -0.76
CTHRC1-201ENST00000330295 PSMB3P49720 205 aa10.28□□□□□ -0.76
CTHRC1-201ENST00000330295 PLP1P60201 277 aa10.28□□□□□ -0.76
CTHRC1-201ENST00000330295 IL15RAQ13261 267 aa10.28□□□□□ -0.76
CTHRC1-201ENST00000330295 Q6ZRG5 221 aa10.28□□□□□ -0.76
CTHRC1-201ENST00000330295 TMEM252Q8N6L7 170 aa10.28□□□□□ -0.76
CTHRC1-201ENST00000330295 LINC00052Q96N35 136 aa10.28□□□□□ -0.76
CTHRC1-201ENST00000330295 Q9H3A6 140 aa10.28□□□□□ -0.76
CTHRC1-201ENST00000330295 DOK5Q9P104 306 aa10.28□□□□□ -0.76
CTHRC1-201ENST00000330295 XCL2Q9UBD3 114 aa10.28□□□□□ -0.76
CTHRC1-201ENST00000330295 AGPAT2O15120 278 aa10.27□□□□□ -0.77
CTHRC1-201ENST00000330295 SIX6O95475 246 aa10.27□□□□□ -0.77
CTHRC1-201ENST00000330295 PTTG1O95997 202 aa10.27□□□□□ -0.77
CTHRC1-201ENST00000330295 ARL16Q0P5N6 197 aa10.27□□□□□ -0.77
CTHRC1-201ENST00000330295 ZNF705AQ6ZN79 300 aaPredicted RBP10.27□□□□□ -0.77
CTHRC1-201ENST00000330295 C16orf92Q96LL3 132 aa10.27□□□□□ -0.77
CTHRC1-201ENST00000330295 RSG1Q9BU20 258 aa10.27□□□□□ -0.77
CTHRC1-201ENST00000330295 SLC25A39Q9BZJ4 359 aaPredicted RBP10.27□□□□□ -0.77
CTHRC1-201ENST00000330295 ARL6Q9H0F7 186 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms