RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 LIPFP07098 398 aa12.12□□□□□ -0.47
BRCC3-201ENST00000330045 SIGLEC15Q6ZMC9 328 aa12.12□□□□□ -0.47
BRCC3-201ENST00000330045 LYPD1Q8N2G4 141 aa12.12□□□□□ -0.47
BRCC3-201ENST00000330045 HLA-DRB1P01911 266 aa12.12□□□□□ -0.47
BRCC3-201ENST00000330045 HTR1DP28221 377 aa12.12□□□□□ -0.47
BRCC3-201ENST00000330045 ZNF672Q499Z4 452 aaPredicted RBP12.12□□□□□ -0.47
BRCC3-201ENST00000330045 RNF125Q96EQ8 232 aa12.12□□□□□ -0.47
BRCC3-201ENST00000330045 PSG8Q9UQ74 426 aa12.12□□□□□ -0.47
BRCC3-201ENST00000330045 ZFYVE26Q68DK2 2539 aa12.11□□□□□ -0.47
BRCC3-201ENST00000330045 NBR2O15453 112 aa12.11□□□□□ -0.47
BRCC3-201ENST00000330045 IL4P05112 153 aa12.11□□□□□ -0.47
BRCC3-201ENST00000330045 OR5AL1P0C617 328 aa12.11□□□□□ -0.47
BRCC3-201ENST00000330045 ZNF138P52744 262 aa12.11□□□□□ -0.47
BRCC3-201ENST00000330045 PSG3Q16557 428 aa12.11□□□□□ -0.47
BRCC3-201ENST00000330045 DMRTA1Q5VZB9 504 aa12.11□□□□□ -0.47
BRCC3-201ENST00000330045 SVEP1Q4LDE5 3571 aa12.11□□□□□ -0.47
BRCC3-201ENST00000330045 ARMS2P0C7Q2 107 aa12.11□□□□□ -0.47
BRCC3-201ENST00000330045 LY6G5BQ8NDX9 201 aa12.11□□□□□ -0.47
BRCC3-201ENST00000330045 ASCL2Q99929 193 aa12.11□□□□□ -0.47
BRCC3-201ENST00000330045 DPM3Q9P2X0 92 aa12.11□□□□□ -0.47
BRCC3-201ENST00000330045 HILPDAQ9Y5L2 63 aa12.11□□□□□ -0.47
BRCC3-201ENST00000330045 FCGR2BP31994 310 aaPredicted RBP12.1□□□□□ -0.47
BRCC3-201ENST00000330045 RIGQ13278 110 aa12.1□□□□□ -0.47
BRCC3-201ENST00000330045 ST20Q9HBF5 79 aa12.1□□□□□ -0.47
BRCC3-201ENST00000330045 PRB4P10163 310 aaPredicted RBP12.1□□□□□ -0.47
BRCC3-201ENST00000330045 ZNF414Q96IQ9 312 aa12.1□□□□□ -0.47
BRCC3-201ENST00000330045 WI2-2373I1.2A0A1W2PRP0 233 aa12.09□□□□□ -0.47
BRCC3-201ENST00000330045 MRPS12O15235 138 aaKnown RBP12.09□□□□□ -0.47
BRCC3-201ENST00000330045 UQCRFS1P47985 274 aa12.09□□□□□ -0.47
BRCC3-201ENST00000330045 ARF6P62330 175 aa12.09□□□□□ -0.47
BRCC3-201ENST00000330045 KLF17Q5JT82 389 aaPredicted RBP12.09□□□□□ -0.47
BRCC3-201ENST00000330045 ORAOV1Q8WV07 137 aa12.09□□□□□ -0.47
BRCC3-201ENST00000330045 TMUB1Q9BVT8 246 aa12.09□□□□□ -0.47
BRCC3-201ENST00000330045 MAP1LC3CQ9BXW4 147 aa12.09□□□□□ -0.47
BRCC3-201ENST00000330045 TMEM191AQ9H0A3 160 aa12.09□□□□□ -0.47
BRCC3-201ENST00000330045 CSN3P07498 182 aa12.09□□□□□ -0.47
BRCC3-201ENST00000330045 CRIP1P50238 77 aa12.09□□□□□ -0.47
BRCC3-201ENST00000330045 NPBQ8NG41 125 aa12.09□□□□□ -0.47
BRCC3-201ENST00000330045 OR11H6Q8NGC7 330 aa12.09□□□□□ -0.47
BRCC3-201ENST00000330045 CFHR4Q92496 578 aa12.09□□□□□ -0.47
BRCC3-201ENST00000330045 S4R3C0 116 aa12.09□□□□□ -0.47
BRCC3-201ENST00000330045 hDV102S1A0JD36 115 aa12.08□□□□□ -0.48
BRCC3-201ENST00000330045 M0R3E3 92 aa12.08□□□□□ -0.48
BRCC3-201ENST00000330045 GNG7O60262 68 aa12.08□□□□□ -0.48
BRCC3-201ENST00000330045 NDUFA3O95167 84 aa12.08□□□□□ -0.48
BRCC3-201ENST00000330045 UNQ5815/PRO19632Q6UWF5 114 aa12.08□□□□□ -0.48
BRCC3-201ENST00000330045 HSPB8Q9UJY1 196 aa12.08□□□□□ -0.48
BRCC3-201ENST00000330045 USP24Q9UPU5 2620 aa12.08□□□□□ -0.48
BRCC3-201ENST00000330045 TRAV30A0A087WSZ9 112 aa12.08□□□□□ -0.48
BRCC3-201ENST00000330045 TCF21O43680 179 aa12.08□□□□□ -0.48
BRCC3-201ENST00000330045 PET117Q6UWS5 81 aa12.08□□□□□ -0.48
BRCC3-201ENST00000330045 S100A7AQ86SG5 101 aa12.08□□□□□ -0.48
BRCC3-201ENST00000330045 GATD1Q8NB37 220 aa12.08□□□□□ -0.48
BRCC3-201ENST00000330045 IGFBPL1Q8WX77 278 aa12.08□□□□□ -0.48
BRCC3-201ENST00000330045 RAB1BQ9H0U4 201 aa12.08□□□□□ -0.48
BRCC3-201ENST00000330045 A0A1B0GW15 77 aa12.07□□□□□ -0.48
BRCC3-201ENST00000330045 CEACAM3P40198 252 aa12.07□□□□□ -0.48
BRCC3-201ENST00000330045 NEU4Q8WWR8 484 aaPredicted RBP12.07□□□□□ -0.48
BRCC3-201ENST00000330045 SPTAN1Q13813 2472 aaKnown RBP12.07□□□□□ -0.48
BRCC3-201ENST00000330045 HSBP1L1C9JCN9 74 aa12.06□□□□□ -0.48
BRCC3-201ENST00000330045 LY6HO94772 140 aa12.06□□□□□ -0.48
BRCC3-201ENST00000330045 HES1Q14469 280 aa12.06□□□□□ -0.48
BRCC3-201ENST00000330045 Q6AWC8 147 aa12.06□□□□□ -0.48
BRCC3-201ENST00000330045 BCL6BQ8N143 479 aaPredicted RBP12.06□□□□□ -0.48
BRCC3-201ENST00000330045 TPPP3Q9BW30 176 aa12.06□□□□□ -0.48
BRCC3-201ENST00000330045 COX11Q9Y6N1 276 aa12.06□□□□□ -0.48
BRCC3-201ENST00000330045 FLNCQ14315 2725 aa12.06□□□□□ -0.48
BRCC3-201ENST00000330045 KLRD1Q13241 179 aa12.06□□□□□ -0.48
BRCC3-201ENST00000330045 PDE6HQ13956 83 aa12.06□□□□□ -0.48
BRCC3-201ENST00000330045 Q6ZVH6 145 aa12.06□□□□□ -0.48
BRCC3-201ENST00000330045 C8orf49Q96NF6 230 aa12.06□□□□□ -0.48
BRCC3-201ENST00000330045 AAMDCQ9H7C9 122 aa12.06□□□□□ -0.48
BRCC3-201ENST00000330045 VPS13CQ709C8 3753 aa12.06□□□□□ -0.48
BRCC3-201ENST00000330045 CT45A10P0DMU9 189 aa12.05□□□□□ -0.48
BRCC3-201ENST00000330045 MFAP4P55083 255 aa12.05□□□□□ -0.48
BRCC3-201ENST00000330045 C5orf64Q2M2E5 130 aa12.05□□□□□ -0.48
BRCC3-201ENST00000330045 ZNF738Q8NE65 137 aa12.05□□□□□ -0.48
BRCC3-201ENST00000330045 FANCD2OSQ96PS1 177 aa12.05□□□□□ -0.48
BRCC3-201ENST00000330045 AP5S1Q9NUS5 200 aa12.05□□□□□ -0.48
BRCC3-201ENST00000330045 TP73-AS1Q9UF72 201 aa12.05□□□□□ -0.48
BRCC3-201ENST00000330045 CACNA1BQ00975 2339 aa12.05□□□□□ -0.48
BRCC3-201ENST00000330045 H0Y8G0 127 aa12.05□□□□□ -0.48
BRCC3-201ENST00000330045 MCRIP2Q9BUT9 160 aaKnown RBP12.05□□□□□ -0.48
BRCC3-201ENST00000330045 PPP1R14DQ9NXH3 145 aa12.05□□□□□ -0.48
BRCC3-201ENST00000330045 TIMM8BQ9Y5J9 83 aaPredicted RBP12.05□□□□□ -0.48
BRCC3-201ENST00000330045 IGLV11-55A0A075B6I3 123 aa12.04□□□□□ -0.48
BRCC3-201ENST00000330045 A0A1W2PRD5 423 aa12.04□□□□□ -0.48
BRCC3-201ENST00000330045 A0A1W2PRF3 423 aa12.04□□□□□ -0.48
BRCC3-201ENST00000330045 A0A1W2PRM7 423 aa12.04□□□□□ -0.48
BRCC3-201ENST00000330045 NPIPB5A8MRT5 1133 aa12.04□□□□□ -0.48
BRCC3-201ENST00000330045 PTTG1IPP53801 180 aa12.04□□□□□ -0.48
BRCC3-201ENST00000330045 FBLN7Q53RD9 439 aa12.04□□□□□ -0.48
BRCC3-201ENST00000330045 FBXL19-AS1Q494R0 122 aa12.04□□□□□ -0.48
BRCC3-201ENST00000330045 SLC25A34Q6PIV7 304 aa12.04□□□□□ -0.48
BRCC3-201ENST00000330045 PRSS3P2Q8NHM4 247 aa12.04□□□□□ -0.48
BRCC3-201ENST00000330045 TIMD4Q96H15 378 aa12.04□□□□□ -0.48
BRCC3-201ENST00000330045 M0R1W7 72 aa12.03□□□□□ -0.48
BRCC3-201ENST00000330045 CCL25O15444 150 aa12.03□□□□□ -0.48
BRCC3-201ENST00000330045 CSN1S1P47710 185 aa12.03□□□□□ -0.48
BRCC3-201ENST00000330045 ZNF562Q6V9R5 426 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms