RNA–Protein interactions for RNA: ENST00000327578.9

PCM1-202, Transcript of pericentriolar material 1, humanhuman

TSL 5 BASIC

Gene PCM1, Length 8,287 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-202ENST00000327578 PPP1R32Q7Z5V6 425 aa11.29□□□□□ -0.6
PCM1-202ENST00000327578 CEND1Q8N111 149 aa11.29□□□□□ -0.6
PCM1-202ENST00000327578 LINC00114Q6XXX2 140 aa11.29□□□□□ -0.6
PCM1-202ENST00000327578 SAP30O75446 220 aa11.28□□□□□ -0.6
PCM1-202ENST00000327578 RPP25LQ8N5L8 163 aaKnown RBP11.28□□□□□ -0.6
PCM1-202ENST00000327578 SS18L2Q9UHA2 77 aa11.28□□□□□ -0.6
PCM1-202ENST00000327578 PLXNB3Q9ULL4 1909 aa11.28□□□□□ -0.6
PCM1-202ENST00000327578 J3QRE1 110 aa11.28□□□□□ -0.6
PCM1-202ENST00000327578 IGLV3-21P80748 117 aaPredicted RBP11.28□□□□□ -0.6
PCM1-202ENST00000327578 SLAQ13239 276 aa11.28□□□□□ -0.6
PCM1-202ENST00000327578 ZNF329Q86UD4 541 aa11.28□□□□□ -0.6
PCM1-202ENST00000327578 GFI1Q99684 422 aa11.28□□□□□ -0.6
PCM1-202ENST00000327578 PMVKQ15126 192 aa11.28□□□□□ -0.6
PCM1-202ENST00000327578 IGFL4Q6B9Z1 124 aa11.28□□□□□ -0.6
PCM1-202ENST00000327578 LY6G5BQ8NDX9 201 aa11.28□□□□□ -0.6
PCM1-202ENST00000327578 LYNX1G3V0Z9 82 aa11.28□□□□□ -0.6
PCM1-202ENST00000327578 LYNX1P0DP58 116 aa11.28□□□□□ -0.6
PCM1-202ENST00000327578 UBE2E2Q96LR5 201 aa11.28□□□□□ -0.6
PCM1-202ENST00000327578 A0A1B0GUS0 222 aa11.28□□□□□ -0.6
PCM1-202ENST00000327578 SRSF7Q16629 238 aaKnown RBP eCLIP11.28□□□□□ -0.61e-8■■□□□ 11.6
PCM1-202ENST00000327578 ANKRD29Q8N6D5 301 aa11.28□□□□□ -0.6
PCM1-202ENST00000327578 LIME1Q9H400 295 aa11.28□□□□□ -0.6
PCM1-202ENST00000327578 IGHG4P01861 327 aa11.28□□□□□ -0.6
PCM1-202ENST00000327578 NTF4P34130 210 aa11.28□□□□□ -0.6
PCM1-202ENST00000327578 MMP23AO75900 390 aa11.27□□□□□ -0.6
PCM1-202ENST00000327578 VMO1Q7Z5L0 202 aa11.27□□□□□ -0.6
PCM1-202ENST00000327578 C9orf106Q8NAJ2 232 aa11.27□□□□□ -0.6
PCM1-202ENST00000327578 NDUFS5O43920 106 aa11.27□□□□□ -0.61
PCM1-202ENST00000327578 CFHR2P36980 270 aa11.27□□□□□ -0.61
PCM1-202ENST00000327578 UTF1Q5T230 341 aa11.27□□□□□ -0.61
PCM1-202ENST00000327578 SUPT4H1P63272 117 aaKnown RBP11.27□□□□□ -0.61
PCM1-202ENST00000327578 LTBP4Q8N2S1 1624 aa11.27□□□□□ -0.61
PCM1-202ENST00000327578 C10orf55Q5SWW7 151 aa11.27□□□□□ -0.61
PCM1-202ENST00000327578 NRXN2Q9P2S2 1712 aa11.27□□□□□ -0.61
PCM1-202ENST00000327578 IGHV2-26A0A0B4J1V2 119 aa11.27□□□□□ -0.61
PCM1-202ENST00000327578 TRAV3A0A0B4J244 114 aa11.27□□□□□ -0.61
PCM1-202ENST00000327578 A0A1W2PPM0 123 aa11.26□□□□□ -0.61
PCM1-202ENST00000327578 TMEM200BQ69YZ2 307 aa11.26□□□□□ -0.61
PCM1-202ENST00000327578 DSCAML1Q8TD84 2053 aa11.26□□□□□ -0.61
PCM1-202ENST00000327578 PFN2P35080 140 aa11.26□□□□□ -0.61
PCM1-202ENST00000327578 TGFBR3LH3BV60 316 aa11.26□□□□□ -0.61
PCM1-202ENST00000327578 RS1O15537 224 aa11.26□□□□□ -0.61
PCM1-202ENST00000327578 NEGR1Q7Z3B1 354 aa11.26□□□□□ -0.61
PCM1-202ENST00000327578 SRSF8Q9BRL6 282 aaKnown RBP11.26□□□□□ -0.61
PCM1-202ENST00000327578 NCOR1O75376 2440 aa11.26□□□□□ -0.61
PCM1-202ENST00000327578 CLPSL1A2RUU4 121 aa11.26□□□□□ -0.61
PCM1-202ENST00000327578 IL18BPO95998 194 aa11.26□□□□□ -0.61
PCM1-202ENST00000327578 SPANXDQ9BXN6 97 aa11.26□□□□□ -0.61
PCM1-202ENST00000327578 KLRD1Q13241 179 aa11.25□□□□□ -0.61
PCM1-202ENST00000327578 LY96Q9Y6Y9 160 aa11.25□□□□□ -0.61
PCM1-202ENST00000327578 C1orf53Q5VUE5 145 aa11.25□□□□□ -0.61
PCM1-202ENST00000327578 A0A1W2PR77 199 aa11.25□□□□□ -0.61
PCM1-202ENST00000327578 SLC25A16P16260 332 aa11.25□□□□□ -0.61
PCM1-202ENST00000327578 TMEM190Q8WZ59 177 aa11.25□□□□□ -0.61
PCM1-202ENST00000327578 C8orf49Q96NF6 230 aa11.25□□□□□ -0.61
PCM1-202ENST00000327578 TP53TG1Q9Y2A0 90 aa11.25□□□□□ -0.61
PCM1-202ENST00000327578 ZSWIM8A7E2V4 1837 aa11.25□□□□□ -0.61
PCM1-202ENST00000327578 THAP8Q8NA92 274 aa11.25□□□□□ -0.61
PCM1-202ENST00000327578 ZDBF2Q9HCK1 2354 aa11.25□□□□□ -0.61
PCM1-202ENST00000327578 H3BMG7 143 aa11.25□□□□□ -0.61
PCM1-202ENST00000327578 TRPT1Q86TN4 253 aaKnown RBP11.25□□□□□ -0.61
PCM1-202ENST00000327578 LINC00479Q96M42 142 aa11.25□□□□□ -0.61
PCM1-202ENST00000327578 MRPS18CQ9Y3D5 142 aaKnown RBP11.24□□□□□ -0.61
PCM1-202ENST00000327578 IGHV1-18A0A0C4DH31 117 aa11.24□□□□□ -0.61
PCM1-202ENST00000327578 FGFBP3Q8TAT2 258 aa11.24□□□□□ -0.61
PCM1-202ENST00000327578 K7EP34 96 aa11.24□□□□□ -0.61
PCM1-202ENST00000327578 CMC4P56277 68 aaPredicted RBP11.24□□□□□ -0.61
PCM1-202ENST00000327578 TINCRA0A1B0GVN0 87 aa11.24□□□□□ -0.61
PCM1-202ENST00000327578 A0A1B0GWJ7 208 aa11.24□□□□□ -0.61
PCM1-202ENST00000327578 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.24□□□□□ -0.619e-7■■■■■ 36.1
PCM1-202ENST00000327578 THBDP07204 575 aa11.24□□□□□ -0.61
PCM1-202ENST00000327578 ETDBQ3ZM63 59 aa11.24□□□□□ -0.61
PCM1-202ENST00000327578 FAM166AQ6J272 317 aa11.24□□□□□ -0.61
PCM1-202ENST00000327578 GFRA4Q9GZZ7 299 aa11.24□□□□□ -0.61
PCM1-202ENST00000327578 K7ERJ3 54 aa11.24□□□□□ -0.61
PCM1-202ENST00000327578 ARMS2P0C7Q2 107 aa11.24□□□□□ -0.61
PCM1-202ENST00000327578 IGHV1-3A0A0C4DH29 117 aa11.23□□□□□ -0.61
PCM1-202ENST00000327578 CEACAM8P31997 349 aaPredicted RBP11.23□□□□□ -0.61
PCM1-202ENST00000327578 NKAPP1Q8N9T2 125 aa11.23□□□□□ -0.61
PCM1-202ENST00000327578 SCRT2Q9NQ03 307 aa11.23□□□□□ -0.61
PCM1-202ENST00000327578 EGR2P11161 476 aaPredicted RBP11.23□□□□□ -0.61
PCM1-202ENST00000327578 SPSB3Q6PJ21 355 aa11.23□□□□□ -0.61
PCM1-202ENST00000327578 FBLN5Q9UBX5 448 aa11.23□□□□□ -0.61
PCM1-202ENST00000327578 ZNF561-AS1K7EIQ3 104 aa11.23□□□□□ -0.61
PCM1-202ENST00000327578 ADCYAP1P18509 176 aa11.23□□□□□ -0.61
PCM1-202ENST00000327578 FOXG1P55316 489 aaPredicted RBP11.23□□□□□ -0.61
PCM1-202ENST00000327578 Q0VG73 95 aa11.22□□□□□ -0.61
PCM1-202ENST00000327578 LYPD1Q8N2G4 141 aa11.22□□□□□ -0.61
PCM1-202ENST00000327578 RNASE6Q93091 150 aaKnown RBP11.22□□□□□ -0.61
PCM1-202ENST00000327578 KIF26AQ9ULI4 1882 aaPredicted RBP11.22□□□□□ -0.61
PCM1-202ENST00000327578 FNDC1Q4ZHG4 1894 aaPredicted RBP11.22□□□□□ -0.61
PCM1-202ENST00000327578 CRYBA4P53673 196 aa11.22□□□□□ -0.61
PCM1-202ENST00000327578 C1QTNF4Q9BXJ3 329 aa11.22□□□□□ -0.61
PCM1-202ENST00000327578 IGHV1-24A0A0C4DH33 117 aa11.22□□□□□ -0.61
PCM1-202ENST00000327578 B5MCH6 92 aa11.22□□□□□ -0.61
PCM1-202ENST00000327578 DKK1O94907 266 aa11.22□□□□□ -0.61
PCM1-202ENST00000327578 IL17RELQ6ZVW7 336 aa11.22□□□□□ -0.61
PCM1-202ENST00000327578 CFHR3Q02985 330 aa11.22□□□□□ -0.61
PCM1-202ENST00000327578 TMEM141Q96I45 108 aa11.22□□□□□ -0.61
PCM1-202ENST00000327578 NMSQ5H8A3 153 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms