RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 LURAP1LQ8IV03 231 aa7.76□□□□□ -1.17
VIPAS39-201ENST00000327028 BLNKQ8WV28 456 aa7.76□□□□□ -1.17
VIPAS39-201ENST00000327028 EIF5A2Q9GZV4 153 aaKnown RBP7.76□□□□□ -1.17
VIPAS39-201ENST00000327028 UQCC3Q6UW78 93 aa7.76□□□□□ -1.17
VIPAS39-201ENST00000327028 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.76□□□□□ -1.17
VIPAS39-201ENST00000327028 LINC00482Q8N8I6 264 aa7.76□□□□□ -1.17
VIPAS39-201ENST00000327028 C17orf77Q96MU5 243 aa7.76□□□□□ -1.17
VIPAS39-201ENST00000327028 RARRES2Q99969 163 aa7.76□□□□□ -1.17
VIPAS39-201ENST00000327028 SIGLEC8Q9NYZ4 499 aa7.76□□□□□ -1.17
VIPAS39-201ENST00000327028 WNK1Q9H4A3 2382 aa7.75□□□□□ -1.17
VIPAS39-201ENST00000327028 ZNF785A8K8V0 405 aa7.75□□□□□ -1.17
VIPAS39-201ENST00000327028 H3BTX0 84 aa7.75□□□□□ -1.17
VIPAS39-201ENST00000327028 ZNF253O75346 499 aa7.75□□□□□ -1.17
VIPAS39-201ENST00000327028 NDUFB4O95168 129 aa7.75□□□□□ -1.17
VIPAS39-201ENST00000327028 CD5P06127 495 aa7.75□□□□□ -1.17
VIPAS39-201ENST00000327028 SNRPCP09234 159 aaKnown RBP7.75□□□□□ -1.17
VIPAS39-201ENST00000327028 PEA15Q15121 130 aa7.75□□□□□ -1.17
VIPAS39-201ENST00000327028 SHISA2Q6UWI4 295 aa7.75□□□□□ -1.17
VIPAS39-201ENST00000327028 TCF24Q7RTU0 167 aa7.75□□□□□ -1.17
VIPAS39-201ENST00000327028 C3orf56Q8N813 242 aa7.75□□□□□ -1.17
VIPAS39-201ENST00000327028 TXNDC17Q9BRA2 123 aa7.75□□□□□ -1.17
VIPAS39-201ENST00000327028 MLXQ9UH92 298 aa7.75□□□□□ -1.17
VIPAS39-201ENST00000327028 GGTLC3B5MD39 225 aa7.75□□□□□ -1.17
VIPAS39-201ENST00000327028 C11orf94C9JXX5 98 aa7.75□□□□□ -1.17
VIPAS39-201ENST00000327028 SLC17A3O00476 420 aa7.75□□□□□ -1.17
VIPAS39-201ENST00000327028 ATP5G3P48201 142 aa7.75□□□□□ -1.17
VIPAS39-201ENST00000327028 CTAG1AP78358 180 aa7.75□□□□□ -1.17
VIPAS39-201ENST00000327028 SRSF3P84103 164 aaKnown RBP7.75□□□□□ -1.17
VIPAS39-201ENST00000327028 MEF2BQ02080 365 aaPredicted RBP7.75□□□□□ -1.17
VIPAS39-201ENST00000327028 CST9LP1Q5W188 147 aa7.75□□□□□ -1.17
VIPAS39-201ENST00000327028 FAM90A2PQ658T7 463 aa7.75□□□□□ -1.17
VIPAS39-201ENST00000327028 RXFP4Q8TDU9 374 aa7.75□□□□□ -1.17
VIPAS39-201ENST00000327028 SMDT1Q9H4I9 107 aa7.75□□□□□ -1.17
VIPAS39-201ENST00000327028 COL6A5A8TX70 2615 aa7.75□□□□□ -1.17
VIPAS39-201ENST00000327028 NDUFS6O75380 124 aaKnown RBP7.74□□□□□ -1.17
VIPAS39-201ENST00000327028 PSG9Q00887 426 aa7.74□□□□□ -1.17
VIPAS39-201ENST00000327028 LYPD1Q8N2G4 141 aa7.74□□□□□ -1.17
VIPAS39-201ENST00000327028 DYNLRB2Q8TF09 96 aa7.74□□□□□ -1.17
VIPAS39-201ENST00000327028 NKX6-2Q9C056 277 aaPredicted RBP7.74□□□□□ -1.17
VIPAS39-201ENST00000327028 Q9H3A6 140 aa7.74□□□□□ -1.17
VIPAS39-201ENST00000327028 OTORQ9NRC9 128 aa7.74□□□□□ -1.17
VIPAS39-201ENST00000327028 STAB1Q9NY15 2570 aa7.74□□□□□ -1.17
VIPAS39-201ENST00000327028 CD81P60033 236 aa7.74□□□□□ -1.17
VIPAS39-201ENST00000327028 RANP62826 216 aaKnown RBP7.74□□□□□ -1.17
VIPAS39-201ENST00000327028 SLC50A1Q9BRV3 221 aa7.74□□□□□ -1.17
VIPAS39-201ENST00000327028 NRN1Q9NPD7 142 aa7.74□□□□□ -1.17
VIPAS39-201ENST00000327028 CCDC28AQ8IWP9 274 aa7.73□□□□□ -1.17
VIPAS39-201ENST00000327028 TCEAL7Q9BRU2 100 aa7.73□□□□□ -1.17
VIPAS39-201ENST00000327028 TREM1Q9NP99 234 aa7.73□□□□□ -1.17
VIPAS39-201ENST00000327028 F6UZH7 168 aa7.73□□□□□ -1.17
VIPAS39-201ENST00000327028 SOCS3O14543 225 aa7.73□□□□□ -1.17
VIPAS39-201ENST00000327028 PDE6DO43924 150 aa7.73□□□□□ -1.17
VIPAS39-201ENST00000327028 RPL11P62913 178 aaKnown RBP7.73□□□□□ -1.17
VIPAS39-201ENST00000327028 SAMD13Q5VXD3 122 aa7.73□□□□□ -1.17
VIPAS39-201ENST00000327028 ZNF331Q9NQX6 463 aaPredicted RBP7.73□□□□□ -1.17
VIPAS39-201ENST00000327028 SELENOKQ9Y6D0 94 aa7.73□□□□□ -1.17
VIPAS39-201ENST00000327028 C9JQL5 133 aa7.72□□□□□ -1.17
VIPAS39-201ENST00000327028 SRP19P09132 144 aaKnown RBP7.72□□□□□ -1.17
VIPAS39-201ENST00000327028 SUMO1P63165 101 aaKnown RBP7.72□□□□□ -1.17
VIPAS39-201ENST00000327028 DEFB114Q30KQ6 69 aa7.72□□□□□ -1.17
VIPAS39-201ENST00000327028 AAMDCQ9H7C9 122 aa7.72□□□□□ -1.17
VIPAS39-201ENST00000327028 PGPA6NDG6 321 aa7.72□□□□□ -1.17
VIPAS39-201ENST00000327028 EXOC3-AS1Q8N2X6 119 aa7.72□□□□□ -1.17
VIPAS39-201ENST00000327028 C5orf17Q8NAS9 161 aa7.72□□□□□ -1.17
VIPAS39-201ENST00000327028 CITED4Q96RK1 184 aa7.72□□□□□ -1.17
VIPAS39-201ENST00000327028 TRAV8-2A0A0B4J237 113 aa7.71□□□□□ -1.17
VIPAS39-201ENST00000327028 TRAV25A0A0B4J276 109 aa7.71□□□□□ -1.17
VIPAS39-201ENST00000327028 TMEM250H0YL14 139 aa7.71□□□□□ -1.17
VIPAS39-201ENST00000327028 SAP30O75446 220 aa7.71□□□□□ -1.17
VIPAS39-201ENST00000327028 C11orf52Q96A22 123 aa7.71□□□□□ -1.17
VIPAS39-201ENST00000327028 SLC35B3Q9H1N7 401 aa7.71□□□□□ -1.17
VIPAS39-201ENST00000327028 MS4A6AQ9H2W1 248 aa7.71□□□□□ -1.17
VIPAS39-201ENST00000327028 CLEC5AQ9NY25 188 aa7.71□□□□□ -1.17
VIPAS39-201ENST00000327028 IGKV3-7A0A075B6H7 116 aa7.71□□□□□ -1.18
VIPAS39-201ENST00000327028 TRAV2A0A0B4J234 112 aa7.71□□□□□ -1.18
VIPAS39-201ENST00000327028 SCO2A0A1W2PP80 73 aa7.71□□□□□ -1.18
VIPAS39-201ENST00000327028 ISLRO14498 428 aa7.71□□□□□ -1.18
VIPAS39-201ENST00000327028 SLC25A5P05141 298 aaKnown RBP7.71□□□□□ -1.18
VIPAS39-201ENST00000327028 TMEM61Q8N0U2 210 aa7.71□□□□□ -1.18
VIPAS39-201ENST00000327028 DCANP1Q8TF63 244 aa7.71□□□□□ -1.18
VIPAS39-201ENST00000327028 MRPL53Q96EL3 112 aaKnown RBP7.71□□□□□ -1.18
VIPAS39-201ENST00000327028 C16orf92Q96LL3 132 aa7.71□□□□□ -1.18
VIPAS39-201ENST00000327028 TSPAN4O14817 238 aa7.7□□□□□ -1.18
VIPAS39-201ENST00000327028 SFTA3P0C7M3 94 aa7.7□□□□□ -1.18
VIPAS39-201ENST00000327028 CD300EQ496F6 205 aaPredicted RBP7.7□□□□□ -1.18
VIPAS39-201ENST00000327028 RBPMS2Q6ZRY4 209 aaKnown RBP7.7□□□□□ -1.18
VIPAS39-201ENST00000327028 ARL6IP6Q8N6S5 226 aa7.7□□□□□ -1.18
VIPAS39-201ENST00000327028 CYB561D1Q8N8Q1 229 aa7.7□□□□□ -1.18
VIPAS39-201ENST00000327028 OR2K2Q8NGT1 345 aa7.7□□□□□ -1.18
VIPAS39-201ENST00000327028 CMTM2Q8TAZ6 248 aa7.7□□□□□ -1.18
VIPAS39-201ENST00000327028 VWFP04275 2813 aa7.7□□□□□ -1.18
VIPAS39-201ENST00000327028 K7EQG2 157 aa7.7□□□□□ -1.18
VIPAS39-201ENST00000327028 PEX7O00628 323 aa7.7□□□□□ -1.18
VIPAS39-201ENST00000327028 IGLV1-51P01701 117 aa7.7□□□□□ -1.18
VIPAS39-201ENST00000327028 GNG5P63218 68 aa7.7□□□□□ -1.18
VIPAS39-201ENST00000327028 PAFAH1B2P68402 229 aa7.7□□□□□ -1.18
VIPAS39-201ENST00000327028 GBGT1Q8N5D6 347 aa7.7□□□□□ -1.18
VIPAS39-201ENST00000327028 HIST1H2BAQ96A08 127 aa7.7□□□□□ -1.18
VIPAS39-201ENST00000327028 EPDR1Q9UM22 224 aa7.7□□□□□ -1.18
VIPAS39-201ENST00000327028 TMEM218A2RU14 115 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms