RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 COX7A1P24310 79 aa11.58□□□□□ -0.56
SSBP3-201ENST00000326956 TCTAP57738 103 aa11.58□□□□□ -0.56
SSBP3-201ENST00000326956 C2orf91Q6ZV80 131 aa11.58□□□□□ -0.56
SSBP3-201ENST00000326956 S100A7AQ86SG5 101 aa11.58□□□□□ -0.56
SSBP3-201ENST00000326956 CEACAM4O75871 244 aa11.57□□□□□ -0.56
SSBP3-201ENST00000326956 IL4P05112 153 aa11.57□□□□□ -0.56
SSBP3-201ENST00000326956 FCGR2BP31994 310 aaPredicted RBP11.57□□□□□ -0.56
SSBP3-201ENST00000326956 PAX2Q02962 417 aa11.57□□□□□ -0.56
SSBP3-201ENST00000326956 LYPD1Q8N2G4 141 aa11.57□□□□□ -0.56
SSBP3-201ENST00000326956 FAM57AQ8TBR7 257 aa11.57□□□□□ -0.56
SSBP3-201ENST00000326956 IGKV1-17P01599 117 aa11.57□□□□□ -0.56
SSBP3-201ENST00000326956 CRYGBP07316 175 aa11.57□□□□□ -0.56
SSBP3-201ENST00000326956 HOXB4P17483 251 aaPredicted RBP11.57□□□□□ -0.56
SSBP3-201ENST00000326956 ORMDL3Q8N138 153 aa11.57□□□□□ -0.56
SSBP3-201ENST00000326956 I3L2K1 104 aa11.56□□□□□ -0.56
SSBP3-201ENST00000326956 M0R3E3 92 aa11.56□□□□□ -0.56
SSBP3-201ENST00000326956 LYZL1Q6UWQ5 148 aa11.56□□□□□ -0.56
SSBP3-201ENST00000326956 SIGLEC15Q6ZMC9 328 aa11.56□□□□□ -0.56
SSBP3-201ENST00000326956 RNASE6Q93091 150 aaKnown RBP11.56□□□□□ -0.56
SSBP3-201ENST00000326956 RNF125Q96EQ8 232 aa11.56□□□□□ -0.56
SSBP3-201ENST00000326956 CACNG7P62955 275 aa11.56□□□□□ -0.56
SSBP3-201ENST00000326956 PRSS33Q8NF86 280 aa11.56□□□□□ -0.56
SSBP3-201ENST00000326956 OR1N2Q8NGR9 330 aa11.56□□□□□ -0.56
SSBP3-201ENST00000326956 SIGLEC8Q9NYZ4 499 aa11.56□□□□□ -0.56
SSBP3-201ENST00000326956 KAAG1Q9UBP8 84 aa11.56□□□□□ -0.56
SSBP3-201ENST00000326956 CACNA1HO95180 2353 aa11.56□□□□□ -0.56
SSBP3-201ENST00000326956 A1L4Q6 167 aa11.56□□□□□ -0.56
SSBP3-201ENST00000326956 H3BRN7 92 aa11.56□□□□□ -0.56
SSBP3-201ENST00000326956 FAM106CPP0CH98 169 aa11.56□□□□□ -0.56
SSBP3-201ENST00000326956 FAM106AQ4KMX7 169 aa11.56□□□□□ -0.56
SSBP3-201ENST00000326956 Q6ZS92 163 aa11.56□□□□□ -0.56
SSBP3-201ENST00000326956 DPF1Q92782 380 aa11.56□□□□□ -0.56
SSBP3-201ENST00000326956 THYN1Q9P016 225 aa11.56□□□□□ -0.56
SSBP3-201ENST00000326956 RABAC1Q9UI14 185 aa11.56□□□□□ -0.56
SSBP3-201ENST00000326956 TMEM213A2RRL7 107 aa11.55□□□□□ -0.56
SSBP3-201ENST00000326956 BUB1B-PAK6H3BSN5 160 aa11.55□□□□□ -0.56
SSBP3-201ENST00000326956 PRRG2O14669 202 aa11.55□□□□□ -0.56
SSBP3-201ENST00000326956 IGFL3Q6UXB1 125 aa11.55□□□□□ -0.56
SSBP3-201ENST00000326956 AMN1Q8IY45 258 aa11.55□□□□□ -0.56
SSBP3-201ENST00000326956 GATD1Q8NB37 220 aa11.55□□□□□ -0.56
SSBP3-201ENST00000326956 C8orf49Q96NF6 230 aa11.55□□□□□ -0.56
SSBP3-201ENST00000326956 RALYQ9UKM9 306 aaKnown RBP11.55□□□□□ -0.56
SSBP3-201ENST00000326956 ZNF785A8K8V0 405 aa11.55□□□□□ -0.56
SSBP3-201ENST00000326956 TNFRSF13BO14836 293 aaPredicted RBP11.55□□□□□ -0.56
SSBP3-201ENST00000326956 LGALS9BQ3B8N2 356 aa11.55□□□□□ -0.56
SSBP3-201ENST00000326956 LGALS9CQ6DKI2 356 aa11.55□□□□□ -0.56
SSBP3-201ENST00000326956 ZNF414Q96IQ9 312 aa11.55□□□□□ -0.56
SSBP3-201ENST00000326956 KLK10O43240 276 aa11.54□□□□□ -0.56
SSBP3-201ENST00000326956 HBDP02042 147 aa11.54□□□□□ -0.56
SSBP3-201ENST00000326956 CRIP1P50238 77 aa11.54□□□□□ -0.56
SSBP3-201ENST00000326956 FXYD7P58549 80 aa11.54□□□□□ -0.56
SSBP3-201ENST00000326956 LOXL1Q08397 574 aaPredicted RBP11.54□□□□□ -0.56
SSBP3-201ENST00000326956 FAM104BQ5XKR9 115 aa11.54□□□□□ -0.56
SSBP3-201ENST00000326956 ZGRF1Q86YA3 2104 aa11.54□□□□□ -0.56
SSBP3-201ENST00000326956 H3BUT2 72 aa11.54□□□□□ -0.56
SSBP3-201ENST00000326956 K7EM74 188 aa11.54□□□□□ -0.56
SSBP3-201ENST00000326956 GNG7O60262 68 aa11.54□□□□□ -0.56
SSBP3-201ENST00000326956 CKS2P33552 79 aa11.54□□□□□ -0.56
SSBP3-201ENST00000326956 ZNF493Q6ZR52 646 aa11.54□□□□□ -0.56
SSBP3-201ENST00000326956 COL25A1Q9BXS0 654 aaPredicted RBP11.54□□□□□ -0.56
SSBP3-201ENST00000326956 HILPDAQ9Y5L2 63 aa11.54□□□□□ -0.56
SSBP3-201ENST00000326956 H3BRM9 83 aa11.53□□□□□ -0.56
SSBP3-201ENST00000326956 IGLV1-47P01700 117 aa11.53□□□□□ -0.56
SSBP3-201ENST00000326956 NMUP48645 174 aa11.53□□□□□ -0.56
SSBP3-201ENST00000326956 HSD52Q0P140 79 aa11.53□□□□□ -0.56
SSBP3-201ENST00000326956 OR9G4Q8NGQ1 327 aa11.53□□□□□ -0.56
SSBP3-201ENST00000326956 MEGF9Q9H1U4 602 aa11.53□□□□□ -0.56
SSBP3-201ENST00000326956 C9orf118A6NHY6 69 aa11.53□□□□□ -0.56
SSBP3-201ENST00000326956 SMAD7O15105 426 aaKnown RBP11.53□□□□□ -0.56
SSBP3-201ENST00000326956 FOXE3Q13461 319 aa11.53□□□□□ -0.56
SSBP3-201ENST00000326956 ZNF491Q8N8L2 437 aa11.53□□□□□ -0.56
SSBP3-201ENST00000326956 IFI27L1Q96BM0 104 aa11.53□□□□□ -0.56
SSBP3-201ENST00000326956 ZNF318Q5VUA4 2279 aa11.53□□□□□ -0.56
SSBP3-201ENST00000326956 A0A0G2JNJ9 132 aa11.53□□□□□ -0.56
SSBP3-201ENST00000326956 A0A1W2PRD5 423 aa11.53□□□□□ -0.56
SSBP3-201ENST00000326956 A0A1W2PRF3 423 aa11.53□□□□□ -0.56
SSBP3-201ENST00000326956 A0A1W2PRM7 423 aa11.53□□□□□ -0.56
SSBP3-201ENST00000326956 APOBEC3AP31941 199 aaPredicted RBP11.53□□□□□ -0.56
SSBP3-201ENST00000326956 RAB37Q96AX2 223 aa11.53□□□□□ -0.56
SSBP3-201ENST00000326956 Q9UFV3 132 aa11.53□□□□□ -0.56
SSBP3-201ENST00000326956 S4R3C0 116 aa11.53□□□□□ -0.56
SSBP3-201ENST00000326956 K7EIM0 57 aa11.52□□□□□ -0.57
SSBP3-201ENST00000326956 OVOL3O00110 214 aa11.52□□□□□ -0.57
SSBP3-201ENST00000326956 TWIST1Q15672 202 aa11.52□□□□□ -0.57
SSBP3-201ENST00000326956 PIP4P1Q86T03 277 aa11.52□□□□□ -0.57
SSBP3-201ENST00000326956 SH2D1AO60880 128 aa11.52□□□□□ -0.57
SSBP3-201ENST00000326956 KIR3DS1Q14943 382 aa11.52□□□□□ -0.57
SSBP3-201ENST00000326956 MRPL51Q4U2R6 128 aaKnown RBP11.52□□□□□ -0.57
SSBP3-201ENST00000326956 BOD1L2Q8IYS8 172 aa11.52□□□□□ -0.57
SSBP3-201ENST00000326956 OR4X2Q8NGF9 303 aa11.52□□□□□ -0.57
SSBP3-201ENST00000326956 NAA38Q9BRA0 125 aaKnown RBP11.52□□□□□ -0.57
SSBP3-201ENST00000326956 SELENOKQ9Y6D0 94 aa11.52□□□□□ -0.57
SSBP3-201ENST00000326956 A0A096LNJ9 63 aa11.51□□□□□ -0.57
SSBP3-201ENST00000326956 THBDP07204 575 aa11.51□□□□□ -0.57
SSBP3-201ENST00000326956 FGF6P10767 208 aa11.51□□□□□ -0.57
SSBP3-201ENST00000326956 SRSF8Q9BRL6 282 aaKnown RBP11.51□□□□□ -0.57
SSBP3-201ENST00000326956 RAB1BQ9H0U4 201 aa11.51□□□□□ -0.57
SSBP3-201ENST00000326956 BDP1A6H8Y1 2624 aa11.51□□□□□ -0.57
SSBP3-201ENST00000326956 PPIAL4CA0A0B4J2A2 164 aa11.51□□□□□ -0.57
SSBP3-201ENST00000326956 PPIAL4GP0DN37 164 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms