RNA–Protein interactions for RNA: ENST00000323926.10

FN1-201, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-201ENST00000323926 LDLRAD4O15165 306 aa10.34□□□□□ -0.75
FN1-201ENST00000323926 PRTN3P24158 256 aa10.34□□□□□ -0.75
FN1-201ENST00000323926 UBE2E1P51965 193 aa10.34□□□□□ -0.75
FN1-201ENST00000323926 PMS2P5A8MQ11 134 aa10.34□□□□□ -0.75
FN1-201ENST00000323926 GPHA2Q96T91 129 aa10.34□□□□□ -0.75
FN1-201ENST00000323926 SAP30O75446 220 aa10.34□□□□□ -0.75
FN1-201ENST00000323926 CELA3AP09093 270 aa10.34□□□□□ -0.75
FN1-201ENST00000323926 MDS2Q8NDY4 140 aa10.34□□□□□ -0.75
FN1-201ENST00000323926 Q8TCH9 128 aa10.34□□□□□ -0.75
FN1-201ENST00000323926 VWC2LB2RUY7 222 aa10.33□□□□□ -0.76
FN1-201ENST00000323926 SRD5A1P18405 259 aa10.33□□□□□ -0.76
FN1-201ENST00000323926 TMEM95Q3KNT9 176 aa10.33□□□□□ -0.76
FN1-201ENST00000323926 C6orf226Q5I0X4 101 aa10.33□□□□□ -0.76
FN1-201ENST00000323926 TIMM21Q9BVV7 248 aa10.33□□□□□ -0.76
FN1-201ENST00000323926 C2CD3Q4AC94 2353 aa10.33□□□□□ -0.76
FN1-201ENST00000323926 PCP4P48539 62 aa10.33□□□□□ -0.76
FN1-201ENST00000323926 PAX4O43316 350 aa10.33□□□□□ -0.76
FN1-201ENST00000323926 OCC1Q8TAD7 63 aa10.33□□□□□ -0.76
FN1-201ENST00000323926 NABP1Q96AH0 204 aa10.33□□□□□ -0.76
FN1-201ENST00000323926 ASCL4Q6XD76 172 aa10.33□□□□□ -0.76
FN1-201ENST00000323926 Q6ZS92 163 aa10.33□□□□□ -0.76
FN1-201ENST00000323926 C8orf31Q8N9H6 132 aa10.33□□□□□ -0.76
FN1-201ENST00000323926 LENEPQ9Y5L5 61 aa10.33□□□□□ -0.76
FN1-201ENST00000323926 IGKV1-9A0A0C4DH69 117 aa10.33□□□□□ -0.76
FN1-201ENST00000323926 RAMP1O60894 148 aa10.33□□□□□ -0.76
FN1-201ENST00000323926 LINC01551Q86U37 167 aa10.32□□□□□ -0.76
FN1-201ENST00000323926 ZNF492Q9P255 531 aa10.32□□□□□ -0.76
FN1-201ENST00000323926 NCOR2Q9Y618 2525 aa10.32□□□□□ -0.76
FN1-201ENST00000323926 TCRAP04437 139 aa10.32□□□□□ -0.76
FN1-201ENST00000323926 ATP6V0BQ99437 205 aa10.32□□□□□ -0.76
FN1-201ENST00000323926 TLN2Q9Y4G6 2542 aa10.32□□□□□ -0.76
FN1-201ENST00000323926 FAM19A2Q8N3H0 131 aa10.32□□□□□ -0.76
FN1-201ENST00000323926 C1orf122Q6ZSJ8 110 aa10.32□□□□□ -0.76
FN1-201ENST00000323926 ARL6IP6Q8N6S5 226 aa10.32□□□□□ -0.76
FN1-201ENST00000323926 LAMTOR3Q9UHA4 124 aa10.32□□□□□ -0.76
FN1-201ENST00000323926 TRAV2A0A0B4J234 112 aa10.32□□□□□ -0.76
FN1-201ENST00000323926 ZCCHC24Q8N2G6 241 aaKnown RBP10.32□□□□□ -0.76
FN1-201ENST00000323926 HIST1H2BLQ99880 126 aa10.32□□□□□ -0.76
FN1-201ENST00000323926 TMEM14CQ9P0S9 112 aa10.32□□□□□ -0.76
FN1-201ENST00000323926 TMEM256Q8N2U0 113 aa10.31□□□□□ -0.76
FN1-201ENST00000323926 IGKV1D-13A0A0B4J2D9 117 aa10.31□□□□□ -0.76
FN1-201ENST00000323926 IGKV1-13P0DP09 117 aa10.31□□□□□ -0.76
FN1-201ENST00000323926 SPINK2P20155 84 aa10.31□□□□□ -0.76
FN1-201ENST00000323926 RBMY1FQ15415 496 aaKnown RBP10.31□□□□□ -0.76
FN1-201ENST00000323926 LY6G6FQ5SQ64 297 aa10.31□□□□□ -0.76
FN1-201ENST00000323926 NPIPB5A8MRT5 1133 aa10.31□□□□□ -0.76
FN1-201ENST00000323926 LMO1P25800 156 aa10.31□□□□□ -0.76
FN1-201ENST00000323926 LIME1Q9H400 295 aa10.31□□□□□ -0.76
FN1-201ENST00000323926 ZFHX2Q9C0A1 2572 aaPredicted RBP10.31□□□□□ -0.76
FN1-201ENST00000323926 TRBV25-1A0A075B6N4 114 aa10.31□□□□□ -0.76
FN1-201ENST00000323926 FOXL2NBQ6ZUU3 175 aa10.31□□□□□ -0.76
FN1-201ENST00000323926 BTCP35070 178 aa10.31□□□□□ -0.76
FN1-201ENST00000323926 PIP4P2Q8N4L2 257 aa10.31□□□□□ -0.76
FN1-201ENST00000323926 LINC00311Q8N616 119 aa10.31□□□□□ -0.76
FN1-201ENST00000323926 IGHV3-49A0A0A0MS15 119 aa10.31□□□□□ -0.76
FN1-201ENST00000323926 IGHV4-39P01824 125 aa10.31□□□□□ -0.76
FN1-201ENST00000323926 LAIR2Q6ISS4 152 aa10.31□□□□□ -0.76
FN1-201ENST00000323926 LYZL4Q96KX0 146 aa10.31□□□□□ -0.76
FN1-201ENST00000323926 SNRPCP09234 159 aaKnown RBP10.3□□□□□ -0.76
FN1-201ENST00000323926 HGFACQ04756 655 aa10.3□□□□□ -0.76
FN1-201ENST00000323926 IGHV3-66A0A0C4DH42 116 aa10.3□□□□□ -0.76
FN1-201ENST00000323926 D6R8Y8 96 aa10.3□□□□□ -0.76
FN1-201ENST00000323926 MDKP21741 143 aaPredicted RBP10.3□□□□□ -0.76
FN1-201ENST00000323926 GAS1P54826 345 aa10.3□□□□□ -0.76
FN1-201ENST00000323926 KLHL30-AS1Q8NEE0 82 aa10.3□□□□□ -0.76
FN1-201ENST00000323926 NUP35Q8NFH5 326 aa10.3□□□□□ -0.76
FN1-201ENST00000323926 ZNF48Q96MX3 618 aaPredicted RBP10.3□□□□□ -0.76
FN1-201ENST00000323926 TRGV1A0A0A0MS02 117 aa10.3□□□□□ -0.76
FN1-201ENST00000323926 TGFBR3LH3BV60 316 aa10.3□□□□□ -0.76
FN1-201ENST00000323926 CD59P13987 128 aa10.3□□□□□ -0.76
FN1-201ENST00000323926 ATP1A1-AS1Q5TC04 95 aa10.3□□□□□ -0.76
FN1-201ENST00000323926 OR11H6Q8NGC7 330 aa10.3□□□□□ -0.76
FN1-201ENST00000323926 IGKV1D-43A0A0B4J1Z2 117 aa10.3□□□□□ -0.76
FN1-201ENST00000323926 FN1P02751 2386 aaKnown RBP10.3□□□□□ -0.76
FN1-201ENST00000323926 H3BTX0 84 aa10.3□□□□□ -0.76
FN1-201ENST00000323926 I3L3M4 83 aa10.3□□□□□ -0.76
FN1-201ENST00000323926 TRAV13-2A0A0B4J235 113 aa10.3□□□□□ -0.76
FN1-201ENST00000323926 IGHV3-35A0A0C4DH35 117 aa10.3□□□□□ -0.76
FN1-201ENST00000323926 H3BUT2 72 aa10.3□□□□□ -0.76
FN1-201ENST00000323926 CRIPAKQ8N1N5 446 aa10.3□□□□□ -0.76
FN1-201ENST00000323926 SSBP2P81877 361 aaPredicted RBP10.29□□□□□ -0.76
FN1-201ENST00000323926 SHANK2-AS3Q9BTD1 123 aa10.29□□□□□ -0.76
FN1-201ENST00000323926 TNRC6BQ9UPQ9 1833 aaKnown RBP10.29□□□□□ -0.76
FN1-201ENST00000323926 SYS1-DBNDD2H3BUS1 97 aa10.29□□□□□ -0.76
FN1-201ENST00000323926 IGHV3-23P01764 117 aa10.29□□□□□ -0.76
FN1-201ENST00000323926 ESDP10768 282 aa10.29□□□□□ -0.76
FN1-201ENST00000323926 MSRB2Q9Y3D2 182 aa10.29□□□□□ -0.76
FN1-201ENST00000323926 PAQR4Q8N4S7 273 aaPredicted RBP10.29□□□□□ -0.76
FN1-201ENST00000323926 HTN3P15516 51 aa10.28□□□□□ -0.76
FN1-201ENST00000323926 A0A0G2JNJ9 132 aa10.28□□□□□ -0.76
FN1-201ENST00000323926 C2orf82Q6UX34 121 aa10.28□□□□□ -0.76
FN1-201ENST00000323926 Q9UFV3 132 aa10.28□□□□□ -0.76
FN1-201ENST00000323926 RPL32P62910 135 aaKnown RBP10.28□□□□□ -0.76
FN1-201ENST00000323926 A0A1B0GUS0 222 aa10.28□□□□□ -0.76
FN1-201ENST00000323926 PRSS46E5RG02 174 aa10.28□□□□□ -0.76
FN1-201ENST00000323926 IGHV3-11P01762 117 aa10.28□□□□□ -0.76
FN1-201ENST00000323926 CFHR2P36980 270 aa10.28□□□□□ -0.76
FN1-201ENST00000323926 PNRC2Q9NPJ4 139 aaKnown RBP10.28□□□□□ -0.76
FN1-201ENST00000323926 MMP23AO75900 390 aa10.28□□□□□ -0.76
FN1-201ENST00000323926 MSMBP08118 114 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms