RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 MOSP00540 346 aa8.29□□□□□ -1.08
SF3B2-201ENST00000322535 MYOD1P15172 320 aa8.29□□□□□ -1.08
SF3B2-201ENST00000322535 OR2H1Q9GZK4 316 aa8.29□□□□□ -1.08
SF3B2-201ENST00000322535 EDA2RQ9HAV5 297 aa8.29□□□□□ -1.08
SF3B2-201ENST00000322535 CRYBG3Q68DQ2 2970 aa8.29□□□□□ -1.08
SF3B2-201ENST00000322535 DNPH1O43598 174 aa8.29□□□□□ -1.08
SF3B2-201ENST00000322535 SYNGR3O43761 229 aa8.29□□□□□ -1.08
SF3B2-201ENST00000322535 IGHG4P01861 327 aa8.29□□□□□ -1.08
SF3B2-201ENST00000322535 CACNG7P62955 275 aa8.29□□□□□ -1.08
SF3B2-201ENST00000322535 Q6ZQT7 251 aa8.29□□□□□ -1.08
SF3B2-201ENST00000322535 FAM214BQ7L5A3 538 aa8.29□□□□□ -1.08
SF3B2-201ENST00000322535 MKXQ8IYA7 352 aa8.29□□□□□ -1.08
SF3B2-201ENST00000322535 VKORC1L1Q8N0U8 176 aa8.29□□□□□ -1.08
SF3B2-201ENST00000322535 KIR2DL5BQ8NHK3 375 aa8.29□□□□□ -1.08
SF3B2-201ENST00000322535 CHCHD1Q96BP2 118 aaKnown RBP8.29□□□□□ -1.08
SF3B2-201ENST00000322535 DKK4Q9UBT3 224 aa8.29□□□□□ -1.08
SF3B2-201ENST00000322535 FZR1Q9UM11 496 aa8.29□□□□□ -1.08
SF3B2-201ENST00000322535 UTP20O75691 2785 aaKnown RBP8.29□□□□□ -1.08
SF3B2-201ENST00000322535 LOC389332A0A1B0GUA5 103 aa8.28□□□□□ -1.08
SF3B2-201ENST00000322535 TMEM8BA6NDV4 472 aa8.28□□□□□ -1.08
SF3B2-201ENST00000322535 APOHP02749 345 aaPredicted RBP8.28□□□□□ -1.08
SF3B2-201ENST00000322535 FCER1GP30273 86 aa8.28□□□□□ -1.08
SF3B2-201ENST00000322535 Q6ZS92 163 aa8.28□□□□□ -1.08
SF3B2-201ENST00000322535 SEM1Q6ZVN7 128 aa8.28□□□□□ -1.08
SF3B2-201ENST00000322535 OR4X2Q8NGF9 303 aa8.28□□□□□ -1.08
SF3B2-201ENST00000322535 TMEM101Q96IK0 257 aa8.28□□□□□ -1.08
SF3B2-201ENST00000322535 IGKV3D-15A0A087WSY6 115 aa8.28□□□□□ -1.08
SF3B2-201ENST00000322535 C9JAW5 83 aa8.28□□□□□ -1.08
SF3B2-201ENST00000322535 HBBP68871 147 aa8.28□□□□□ -1.08
SF3B2-201ENST00000322535 RASL11AQ6T310 242 aa8.28□□□□□ -1.08
SF3B2-201ENST00000322535 HIGD1AQ9Y241 93 aa8.28□□□□□ -1.08
SF3B2-201ENST00000322535 K7ENP7 123 aa8.27□□□□□ -1.09
SF3B2-201ENST00000322535 OR2J3O76001 311 aa8.27□□□□□ -1.09
SF3B2-201ENST00000322535 HOXA4Q00056 320 aaPredicted RBP8.27□□□□□ -1.09
SF3B2-201ENST00000322535 FOXL2NBQ6ZUU3 175 aa8.27□□□□□ -1.09
SF3B2-201ENST00000322535 Q8NA96 180 aa8.27□□□□□ -1.09
SF3B2-201ENST00000322535 IGSF10Q6WRI0 2623 aa8.27□□□□□ -1.09
SF3B2-201ENST00000322535 IGHG3P01860 377 aa8.27□□□□□ -1.09
SF3B2-201ENST00000322535 AREGP15514 252 aa8.27□□□□□ -1.09
SF3B2-201ENST00000322535 IGHV1-2P23083 117 aa8.27□□□□□ -1.09
SF3B2-201ENST00000322535 FGF12P61328 243 aa8.27□□□□□ -1.09
SF3B2-201ENST00000322535 LY6DQ14210 128 aa8.27□□□□□ -1.09
SF3B2-201ENST00000322535 SIGLEC15Q6ZMC9 328 aa8.27□□□□□ -1.09
SF3B2-201ENST00000322535 Q6ZS49 121 aa8.27□□□□□ -1.09
SF3B2-201ENST00000322535 OR9G4Q8NGQ1 327 aa8.27□□□□□ -1.09
SF3B2-201ENST00000322535 PRSS3P2Q8NHM4 247 aa8.27□□□□□ -1.09
SF3B2-201ENST00000322535 WIPF2Q8TF74 440 aaPredicted RBP8.27□□□□□ -1.09
SF3B2-201ENST00000322535 TMEM213A2RRL7 107 aa8.26□□□□□ -1.09
SF3B2-201ENST00000322535 LTAP01374 205 aa8.26□□□□□ -1.09
SF3B2-201ENST00000322535 MDP1Q86V88 176 aa8.26□□□□□ -1.09
SF3B2-201ENST00000322535 PIP4P2Q8N4L2 257 aa8.26□□□□□ -1.09
SF3B2-201ENST00000322535 AP5S1Q9NUS5 200 aa8.26□□□□□ -1.09
SF3B2-201ENST00000322535 MBD3L4A6NDZ8 208 aaPredicted RBP8.26□□□□□ -1.09
SF3B2-201ENST00000322535 MBD3L3A6NE82 208 aaPredicted RBP8.26□□□□□ -1.09
SF3B2-201ENST00000322535 MBD3L5A6NJ08 208 aaPredicted RBP8.26□□□□□ -1.09
SF3B2-201ENST00000322535 FAM106CPP0CH98 169 aa8.26□□□□□ -1.09
SF3B2-201ENST00000322535 FAM106AQ4KMX7 169 aa8.26□□□□□ -1.09
SF3B2-201ENST00000322535 ZNF645Q8N7E2 425 aa8.26□□□□□ -1.09
SF3B2-201ENST00000322535 ZNF747Q9BV97 191 aa8.26□□□□□ -1.09
SF3B2-201ENST00000322535 PRDM14Q9GZV8 571 aa8.26□□□□□ -1.09
SF3B2-201ENST00000322535 FLNCQ14315 2725 aa8.26□□□□□ -1.09
SF3B2-201ENST00000322535 TMSB15BA0A087X1C1 80 aa8.26□□□□□ -1.09
SF3B2-201ENST00000322535 DEFB108AA8MXU0 73 aa8.26□□□□□ -1.09
SF3B2-201ENST00000322535 PRB4P10163 310 aaPredicted RBP8.26□□□□□ -1.09
SF3B2-201ENST00000322535 CRYGSP22914 178 aa8.26□□□□□ -1.09
SF3B2-201ENST00000322535 ATP6V0E2Q8NHE4 81 aa8.26□□□□□ -1.09
SF3B2-201ENST00000322535 FAM215AQ9Y5M1 114 aa8.26□□□□□ -1.09
SF3B2-201ENST00000322535 IGFL3Q6UXB1 125 aa8.25□□□□□ -1.09
SF3B2-201ENST00000322535 RPEQ96AT9 228 aa8.25□□□□□ -1.09
SF3B2-201ENST00000322535 IGF2BP2-AS1Q96M15 143 aa8.25□□□□□ -1.09
SF3B2-201ENST00000322535 C21orf62Q9NYP8 219 aa8.25□□□□□ -1.09
SF3B2-201ENST00000322535 KLK5Q9Y337 293 aaPredicted RBP8.25□□□□□ -1.09
SF3B2-201ENST00000322535 VPS13CQ709C8 3753 aa8.25□□□□□ -1.09
SF3B2-201ENST00000322535 MGST3O14880 152 aa8.25□□□□□ -1.09
SF3B2-201ENST00000322535 MPDU1O75352 247 aa8.25□□□□□ -1.09
SF3B2-201ENST00000322535 UCNP55089 124 aa8.25□□□□□ -1.09
SF3B2-201ENST00000322535 GNG5P63218 68 aa8.25□□□□□ -1.09
SF3B2-201ENST00000322535 CFAP126Q5VTH2 177 aa8.25□□□□□ -1.09
SF3B2-201ENST00000322535 C22orf34Q6ZV56 151 aa8.25□□□□□ -1.09
SF3B2-201ENST00000322535 SLC25A33Q9BSK2 321 aa8.25□□□□□ -1.09
SF3B2-201ENST00000322535 CENPEQ02224 2701 aa8.25□□□□□ -1.09
SF3B2-201ENST00000322535 IGHV3-43A0A0B4J1X8 118 aa8.24□□□□□ -1.09
SF3B2-201ENST00000322535 OOSP1A8MZH6 123 aa8.24□□□□□ -1.09
SF3B2-201ENST00000322535 IGHV3-43DP0DP04 118 aa8.24□□□□□ -1.09
SF3B2-201ENST00000322535 LOXL1Q08397 574 aaPredicted RBP8.24□□□□□ -1.09
SF3B2-201ENST00000322535 ZC2HC1BQ5TFG8 222 aa8.24□□□□□ -1.09
SF3B2-201ENST00000322535 MOB3BQ86TA1 216 aa8.24□□□□□ -1.09
SF3B2-201ENST00000322535 CXorf67Q86X51 503 aaPredicted RBP8.24□□□□□ -1.09
SF3B2-201ENST00000322535 FGF23Q9GZV9 251 aaPredicted RBP8.24□□□□□ -1.09
SF3B2-201ENST00000322535 CSMD2Q7Z408 3487 aa8.24□□□□□ -1.09
SF3B2-201ENST00000322535 HIVEP3Q5T1R4 2406 aa8.24□□□□□ -1.09
SF3B2-201ENST00000322535 J3QLI3 93 aa8.24□□□□□ -1.09
SF3B2-201ENST00000322535 IGHV3-13P01766 116 aa8.24□□□□□ -1.09
SF3B2-201ENST00000322535 COL8A1P27658 744 aa8.24□□□□□ -1.09
SF3B2-201ENST00000322535 SEC61GP60059 68 aa8.24□□□□□ -1.09
SF3B2-201ENST00000322535 TMEM167BQ9NRX6 74 aa8.24□□□□□ -1.09
SF3B2-201ENST00000322535 MDFICQ9P1T7 246 aa8.24□□□□□ -1.09
SF3B2-201ENST00000322535 AMMECR1Q9Y4X0 333 aaPredicted RBP8.24□□□□□ -1.09
SF3B2-201ENST00000322535 EMP1P54849 157 aa8.23□□□□□ -1.09
SF3B2-201ENST00000322535 UBE2L3P68036 154 aaKnown RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms