RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 CD33P20138 364 aa7.38□□□□□ -1.23
TMEM39A-201ENST00000319172 G0S2P27469 103 aa7.38□□□□□ -1.23
TMEM39A-201ENST00000319172 ST6GALNAC6Q969X2 333 aa7.38□□□□□ -1.23
TMEM39A-201ENST00000319172 FAM110DQ8TAY7 271 aaPredicted RBP7.38□□□□□ -1.23
TMEM39A-201ENST00000319172 FRYLO94915 3013 aa7.38□□□□□ -1.23
TMEM39A-201ENST00000319172 TOMM40O96008 361 aa7.38□□□□□ -1.23
TMEM39A-201ENST00000319172 IGLC1P0CG04 106 aa7.38□□□□□ -1.23
TMEM39A-201ENST00000319172 LMO4P61968 165 aa7.38□□□□□ -1.23
TMEM39A-201ENST00000319172 CIARTQ8N365 385 aaPredicted RBP7.38□□□□□ -1.23
TMEM39A-201ENST00000319172 ACANP16112 2415 aa7.37□□□□□ -1.23
TMEM39A-201ENST00000319172 OVOL3O00110 214 aa7.37□□□□□ -1.23
TMEM39A-201ENST00000319172 IGHV4-59P01825 116 aa7.37□□□□□ -1.23
TMEM39A-201ENST00000319172 TCRAP04437 139 aa7.37□□□□□ -1.23
TMEM39A-201ENST00000319172 PRR20EP86478 221 aa7.37□□□□□ -1.23
TMEM39A-201ENST00000319172 PRR20CP86479 221 aa7.37□□□□□ -1.23
TMEM39A-201ENST00000319172 PRR20DP86480 221 aa7.37□□□□□ -1.23
TMEM39A-201ENST00000319172 PRR20BP86481 221 aa7.37□□□□□ -1.23
TMEM39A-201ENST00000319172 PRR20AP86496 221 aa7.37□□□□□ -1.23
TMEM39A-201ENST00000319172 DEFB112Q30KQ8 113 aa7.37□□□□□ -1.23
TMEM39A-201ENST00000319172 Q8TAT8 98 aa7.37□□□□□ -1.23
TMEM39A-201ENST00000319172 ZNF48Q96MX3 618 aaPredicted RBP7.37□□□□□ -1.23
TMEM39A-201ENST00000319172 RPP21Q9H633 154 aaKnown RBP7.37□□□□□ -1.23
TMEM39A-201ENST00000319172 PTPRBP23467 1997 aa7.37□□□□□ -1.23
TMEM39A-201ENST00000319172 IGLV2-23P01705 113 aa7.37□□□□□ -1.23
TMEM39A-201ENST00000319172 ZNF843Q8N446 348 aa7.37□□□□□ -1.23
TMEM39A-201ENST00000319172 PEMTQ9UBM1 199 aa7.37□□□□□ -1.23
TMEM39A-201ENST00000319172 CENPEQ02224 2701 aa7.37□□□□□ -1.23
TMEM39A-201ENST00000319172 P0C879 139 aa7.37□□□□□ -1.23
TMEM39A-201ENST00000319172 GZMBP10144 247 aa7.37□□□□□ -1.23
TMEM39A-201ENST00000319172 PPIFP30405 207 aaKnown RBP7.37□□□□□ -1.23
TMEM39A-201ENST00000319172 IQCJQ1A5X6 159 aa7.37□□□□□ -1.23
TMEM39A-201ENST00000319172 C2orf88Q9BSF0 95 aa7.37□□□□□ -1.23
TMEM39A-201ENST00000319172 C11orf1Q9H5F2 150 aa7.37□□□□□ -1.23
TMEM39A-201ENST00000319172 HCFC1P51610 2035 aa7.37□□□□□ -1.23
TMEM39A-201ENST00000319172 TRBV7-1A0A0A6YYK4 115 aa7.36□□□□□ -1.23
TMEM39A-201ENST00000319172 NPIPB5A8MRT5 1133 aa7.36□□□□□ -1.23
TMEM39A-201ENST00000319172 DEFB113Q30KQ7 82 aa7.36□□□□□ -1.23
TMEM39A-201ENST00000319172 ZNF295-AS1Q8N0V1 137 aa7.36□□□□□ -1.23
TMEM39A-201ENST00000319172 SHANK2-AS3Q9BTD1 123 aa7.36□□□□□ -1.23
TMEM39A-201ENST00000319172 SSBP4Q9BWG4 385 aaPredicted RBP7.36□□□□□ -1.23
TMEM39A-201ENST00000319172 LINC00574Q9H8X3 128 aa7.36□□□□□ -1.23
TMEM39A-201ENST00000319172 LSM4Q9Y4Z0 139 aaKnown RBP7.36□□□□□ -1.23
TMEM39A-201ENST00000319172 TANC2Q9HCD6 1990 aa7.36□□□□□ -1.23
TMEM39A-201ENST00000319172 GGTLC3B5MD39 225 aa7.36□□□□□ -1.23
TMEM39A-201ENST00000319172 CD99P14209 185 aa7.36□□□□□ -1.23
TMEM39A-201ENST00000319172 CKS2P33552 79 aa7.36□□□□□ -1.23
TMEM39A-201ENST00000319172 PTTG1IPP53801 180 aa7.36□□□□□ -1.23
TMEM39A-201ENST00000319172 BLCAPP62952 87 aa7.36□□□□□ -1.23
TMEM39A-201ENST00000319172 GAGE1Q13065 139 aa7.36□□□□□ -1.23
TMEM39A-201ENST00000319172 HIST2H2BCQ6DN03 193 aa7.36□□□□□ -1.23
TMEM39A-201ENST00000319172 SIGLEC15Q6ZMC9 328 aa7.36□□□□□ -1.23
TMEM39A-201ENST00000319172 PIP4P2Q8N4L2 257 aa7.36□□□□□ -1.23
TMEM39A-201ENST00000319172 HSPB9Q9BQS6 159 aa7.36□□□□□ -1.23
TMEM39A-201ENST00000319172 CDC42EP3Q9UKI2 254 aa7.36□□□□□ -1.23
TMEM39A-201ENST00000319172 A0A1W2PPR1 153 aa7.36□□□□□ -1.23
TMEM39A-201ENST00000319172 C11orf71Q6IPW1 123 aa7.36□□□□□ -1.23
TMEM39A-201ENST00000319172 SLC50A1Q9BRV3 221 aa7.36□□□□□ -1.23
TMEM39A-201ENST00000319172 MRPL36Q9P0J6 103 aaKnown RBP7.36□□□□□ -1.23
TMEM39A-201ENST00000319172 IGHV7-81A0A0B4J1V7 117 aa7.36□□□□□ -1.23
TMEM39A-201ENST00000319172 HBBP68871 147 aa7.36□□□□□ -1.23
TMEM39A-201ENST00000319172 LDLRAD2Q5SZI1 272 aa7.36□□□□□ -1.23
TMEM39A-201ENST00000319172 NUDT10Q8NFP7 164 aa7.36□□□□□ -1.23
TMEM39A-201ENST00000319172 NUDT11Q96G61 164 aa7.36□□□□□ -1.23
TMEM39A-201ENST00000319172 OSTCQ9NRP0 149 aa7.36□□□□□ -1.23
TMEM39A-201ENST00000319172 KMT2EQ8IZD2 1858 aa7.35□□□□□ -1.23
TMEM39A-201ENST00000319172 IGKV1OR2-108A0A075B7D4 117 aa7.35□□□□□ -1.23
TMEM39A-201ENST00000319172 M0R381 172 aa7.35□□□□□ -1.23
TMEM39A-201ENST00000319172 VWC2Q2TAL6 325 aa7.35□□□□□ -1.23
TMEM39A-201ENST00000319172 TMEM249Q2WGJ8 235 aa7.35□□□□□ -1.23
TMEM39A-201ENST00000319172 AMMECR1LQ6DCA0 310 aa7.35□□□□□ -1.23
TMEM39A-201ENST00000319172 SYT8Q8NBV8 401 aa7.35□□□□□ -1.23
TMEM39A-201ENST00000319172 VAMP8Q9BV40 100 aa7.35□□□□□ -1.23
TMEM39A-201ENST00000319172 SLC25A2Q9BXI2 301 aa7.35□□□□□ -1.23
TMEM39A-201ENST00000319172 SIRPDQ9H106 197 aa7.35□□□□□ -1.23
TMEM39A-201ENST00000319172 EIF4EBP1Q13541 118 aaPredicted RBP7.35□□□□□ -1.23
TMEM39A-201ENST00000319172 DEFB121Q5J5C9 76 aa7.35□□□□□ -1.23
TMEM39A-201ENST00000319172 ASPHD1Q5U4P2 390 aa7.35□□□□□ -1.23
TMEM39A-201ENST00000319172 Q6ZN92 141 aa7.35□□□□□ -1.23
TMEM39A-201ENST00000319172 REC114Q7Z4M0 266 aa7.35□□□□□ -1.23
TMEM39A-201ENST00000319172 SAP30O75446 220 aa7.35□□□□□ -1.23
TMEM39A-201ENST00000319172 FBLN7Q53RD9 439 aa7.35□□□□□ -1.23
TMEM39A-201ENST00000319172 DYNAPQ8N1N2 210 aa7.35□□□□□ -1.23
TMEM39A-201ENST00000319172 TMEM170AQ8WVE7 144 aa7.35□□□□□ -1.23
TMEM39A-201ENST00000319172 DSPP15924 2871 aaKnown RBP7.34□□□□□ -1.23
TMEM39A-201ENST00000319172 IGKV3OR2-268A0A0C4DH90 116 aa7.34□□□□□ -1.23
TMEM39A-201ENST00000319172 A0A1B0GUT8 65 aa7.34□□□□□ -1.23
TMEM39A-201ENST00000319172 ZNF688P0C7X2 276 aa7.34□□□□□ -1.23
TMEM39A-201ENST00000319172 YPEL3P61236 119 aaPredicted RBP7.34□□□□□ -1.23
TMEM39A-201ENST00000319172 VN1R17PQ8TDU5 208 aa7.34□□□□□ -1.23
TMEM39A-201ENST00000319172 USMG5Q96IX5 58 aa7.34□□□□□ -1.23
TMEM39A-201ENST00000319172 LINC00587B1AMM8 73 aa7.34□□□□□ -1.23
TMEM39A-201ENST00000319172 RNASE4P34096 147 aaKnown RBP7.34□□□□□ -1.23
TMEM39A-201ENST00000319172 SYNJ2BPP57105 145 aa7.34□□□□□ -1.23
TMEM39A-201ENST00000319172 MORN5Q5VZ52 161 aa7.34□□□□□ -1.23
TMEM39A-201ENST00000319172 Q8N9W7 124 aa7.34□□□□□ -1.23
TMEM39A-201ENST00000319172 ZNF114Q8NC26 417 aa7.34□□□□□ -1.23
TMEM39A-201ENST00000319172 RHPN1-AS1Q9BWJ2 59 aa7.34□□□□□ -1.23
TMEM39A-201ENST00000319172 HOXA3O43365 443 aaPredicted RBP7.34□□□□□ -1.23
TMEM39A-201ENST00000319172 CDX1P47902 265 aaPredicted RBP7.34□□□□□ -1.23
TMEM39A-201ENST00000319172 RPS20P60866 119 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms