RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 SHANK2-AS3Q9BTD1 123 aa9.69□□□□□ -0.86
AMBRA1-201ENST00000314845 SELENOKQ9Y6D0 94 aa9.69□□□□□ -0.86
AMBRA1-201ENST00000314845 ZGRF1Q86YA3 2104 aa9.69□□□□□ -0.86
AMBRA1-201ENST00000314845 IGKV1-6A0A0C4DH72 117 aa9.68□□□□□ -0.86
AMBRA1-201ENST00000314845 IGLV1-44P01699 117 aa9.68□□□□□ -0.86
AMBRA1-201ENST00000314845 IGKCP01834 107 aa9.68□□□□□ -0.86
AMBRA1-201ENST00000314845 RPL35AP18077 110 aaKnown RBP9.68□□□□□ -0.86
AMBRA1-201ENST00000314845 SYNJ2BPP57105 145 aa9.68□□□□□ -0.86
AMBRA1-201ENST00000314845 SEC11AP67812 179 aa9.68□□□□□ -0.86
AMBRA1-201ENST00000314845 SPG11Q96JI7 2443 aa9.68□□□□□ -0.86
AMBRA1-201ENST00000314845 IGHV2-70DA0A0C4DH43 119 aa9.68□□□□□ -0.86
AMBRA1-201ENST00000314845 NDUFB8O95169 186 aa9.68□□□□□ -0.86
AMBRA1-201ENST00000314845 DEFB121Q5J5C9 76 aa9.68□□□□□ -0.86
AMBRA1-201ENST00000314845 CACNA1AO00555 2505 aa9.68□□□□□ -0.86
AMBRA1-201ENST00000314845 LAMTOR2Q9Y2Q5 125 aa9.68□□□□□ -0.86
AMBRA1-201ENST00000314845 VCYO14598 125 aa9.68□□□□□ -0.86
AMBRA1-201ENST00000314845 SH2D1AO60880 128 aa9.68□□□□□ -0.86
AMBRA1-201ENST00000314845 DERL1Q9BUN8 251 aa9.68□□□□□ -0.86
AMBRA1-201ENST00000314845 SPCS1Q9Y6A9 102 aa9.68□□□□□ -0.86
AMBRA1-201ENST00000314845 IGLV3-9A0A075B6K5 115 aa9.67□□□□□ -0.86
AMBRA1-201ENST00000314845 LOXP28300 417 aaPredicted RBP9.67□□□□□ -0.86
AMBRA1-201ENST00000314845 SLC25A2Q9BXI2 301 aa9.67□□□□□ -0.86
AMBRA1-201ENST00000314845 FAM215AQ9Y5M1 114 aa9.67□□□□□ -0.86
AMBRA1-201ENST00000314845 ZNF815PA8K554 130 aa9.67□□□□□ -0.86
AMBRA1-201ENST00000314845 D6R8Y8 96 aa9.67□□□□□ -0.86
AMBRA1-201ENST00000314845 ATP6V0E1O15342 81 aa9.67□□□□□ -0.86
AMBRA1-201ENST00000314845 LYL1P12980 280 aa9.67□□□□□ -0.86
AMBRA1-201ENST00000314845 YPEL3P61236 119 aaPredicted RBP9.67□□□□□ -0.86
AMBRA1-201ENST00000314845 RUSC1-AS1Q66K80 236 aa9.67□□□□□ -0.86
AMBRA1-201ENST00000314845 UBE2DNLQ8IWF7 75 aa9.67□□□□□ -0.86
AMBRA1-201ENST00000314845 J3QLI3 93 aa9.67□□□□□ -0.86
AMBRA1-201ENST00000314845 MLANAQ16655 118 aa9.67□□□□□ -0.86
AMBRA1-201ENST00000314845 LINC00311Q8N616 119 aa9.67□□□□□ -0.86
AMBRA1-201ENST00000314845 NCR2O95944 276 aa9.67□□□□□ -0.86
AMBRA1-201ENST00000314845 TMEM14BQ9NUH8 114 aa9.67□□□□□ -0.86
AMBRA1-201ENST00000314845 TRAV8-1A0A0A6YYK1 113 aa9.66□□□□□ -0.86
AMBRA1-201ENST00000314845 PRB4P10163 310 aaPredicted RBP9.66□□□□□ -0.86
AMBRA1-201ENST00000314845 CR1LQ2VPA4 569 aa9.66□□□□□ -0.86
AMBRA1-201ENST00000314845 TEX36Q5VZQ5 186 aa9.66□□□□□ -0.86
AMBRA1-201ENST00000314845 PRSS33Q8NF86 280 aa9.66□□□□□ -0.86
AMBRA1-201ENST00000314845 OR5A1Q8NGJ0 315 aa9.66□□□□□ -0.86
AMBRA1-201ENST00000314845 NHP2Q9NX24 153 aaKnown RBP9.66□□□□□ -0.86
AMBRA1-201ENST00000314845 TMEM249Q2WGJ8 235 aa9.66□□□□□ -0.86
AMBRA1-201ENST00000314845 AMBPP02760 352 aa9.66□□□□□ -0.86
AMBRA1-201ENST00000314845 DEFB131AP59861 70 aa9.66□□□□□ -0.86
AMBRA1-201ENST00000314845 CD300EQ496F6 205 aaPredicted RBP9.66□□□□□ -0.86
AMBRA1-201ENST00000314845 UBE2E2Q96LR5 201 aa9.66□□□□□ -0.86
AMBRA1-201ENST00000314845 Q96MF0 132 aa9.66□□□□□ -0.86
AMBRA1-201ENST00000314845 C1orf147Q96MC9 270 aaPredicted RBP9.65□□□□□ -0.86
AMBRA1-201ENST00000314845 TRAV2A0A0B4J234 112 aa9.65□□□□□ -0.86
AMBRA1-201ENST00000314845 CKS1BP61024 79 aa9.65□□□□□ -0.86
AMBRA1-201ENST00000314845 ZNF833PQ6ZTB9 187 aa9.65□□□□□ -0.86
AMBRA1-201ENST00000314845 NDUFA4L2Q9NRX3 87 aa9.65□□□□□ -0.86
AMBRA1-201ENST00000314845 MGAMO43451 1857 aa9.65□□□□□ -0.86
AMBRA1-201ENST00000314845 ZNRD1Q9P1U0 126 aa9.65□□□□□ -0.86
AMBRA1-201ENST00000314845 MS4A6AQ9H2W1 248 aa9.65□□□□□ -0.87
AMBRA1-201ENST00000314845 TICRRQ7Z2Z1 1910 aa9.65□□□□□ -0.87
AMBRA1-201ENST00000314845 HEATR5AQ86XA9 2040 aa9.65□□□□□ -0.87
AMBRA1-201ENST00000314845 YLPM1P49750 1951 aaKnown RBP9.64□□□□□ -0.87
AMBRA1-201ENST00000314845 TSPAN13O95857 204 aa9.64□□□□□ -0.87
AMBRA1-201ENST00000314845 IGFL4Q6B9Z1 124 aa9.64□□□□□ -0.87
AMBRA1-201ENST00000314845 NUP35Q8NFH5 326 aa9.64□□□□□ -0.87
AMBRA1-201ENST00000314845 PGPEP1Q9NXJ5 209 aa9.64□□□□□ -0.87
AMBRA1-201ENST00000314845 IGHV3-73A0A0B4J1V6 119 aa9.64□□□□□ -0.87
AMBRA1-201ENST00000314845 TYMSP04818 313 aa9.64□□□□□ -0.87
AMBRA1-201ENST00000314845 LINC00158P58513 81 aa9.64□□□□□ -0.87
AMBRA1-201ENST00000314845 TEX43Q6ZNM6 134 aa9.64□□□□□ -0.87
AMBRA1-201ENST00000314845 C14orf178Q8N769 122 aaPredicted RBP9.64□□□□□ -0.87
AMBRA1-201ENST00000314845 PLEKHB2Q96CS7 222 aa9.64□□□□□ -0.87
AMBRA1-201ENST00000314845 CXCL1P09341 107 aa9.64□□□□□ -0.87
AMBRA1-201ENST00000314845 FXYD7P58549 80 aa9.64□□□□□ -0.87
AMBRA1-201ENST00000314845 MAPK1IP1LQ8NDC0 245 aa9.64□□□□□ -0.87
AMBRA1-201ENST00000314845 HIST1H2BLQ99880 126 aa9.64□□□□□ -0.87
AMBRA1-201ENST00000314845 UBE2CO00762 179 aa9.64□□□□□ -0.87
AMBRA1-201ENST00000314845 IGHV3-53P01767 116 aa9.64□□□□□ -0.87
AMBRA1-201ENST00000314845 Q86TA4 180 aa9.64□□□□□ -0.87
AMBRA1-201ENST00000314845 CUL9Q8IWT3 2517 aa9.64□□□□□ -0.87
AMBRA1-201ENST00000314845 COLCA2A8K830 154 aa9.63□□□□□ -0.87
AMBRA1-201ENST00000314845 TMEM238C9JI98 176 aa9.63□□□□□ -0.87
AMBRA1-201ENST00000314845 PAX2Q02962 417 aa9.63□□□□□ -0.87
AMBRA1-201ENST00000314845 C1orf194Q5T5A4 169 aa9.63□□□□□ -0.87
AMBRA1-201ENST00000314845 WDR86Q86TI4 376 aa9.63□□□□□ -0.87
AMBRA1-201ENST00000314845 C17orf58Q2M2W7 97 aa9.63□□□□□ -0.87
AMBRA1-201ENST00000314845 ANAPC10Q9UM13 185 aa9.63□□□□□ -0.87
AMBRA1-201ENST00000314845 H3BUT2 72 aa9.63□□□□□ -0.87
AMBRA1-201ENST00000314845 KAAG1Q9UBP8 84 aa9.63□□□□□ -0.87
AMBRA1-201ENST00000314845 A0A0U1RRA0 63 aa9.63□□□□□ -0.87
AMBRA1-201ENST00000314845 LINC01619G3V211 115 aa9.63□□□□□ -0.87
AMBRA1-201ENST00000314845 WISP1O95388 367 aa9.63□□□□□ -0.87
AMBRA1-201ENST00000314845 C10orf126Q8N4M7 172 aa9.63□□□□□ -0.87
AMBRA1-201ENST00000314845 DOCK9Q9BZ29 2069 aa9.63□□□□□ -0.87
AMBRA1-201ENST00000314845 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.62□□□□□ -0.87
AMBRA1-201ENST00000314845 RASL10AQ92737 203 aa9.62□□□□□ -0.87
AMBRA1-201ENST00000314845 ZNF503-AS2A6NEH8 195 aa9.62□□□□□ -0.87
AMBRA1-201ENST00000314845 RHODO00212 210 aa9.62□□□□□ -0.87
AMBRA1-201ENST00000314845 G3V318 75 aa9.62□□□□□ -0.87
AMBRA1-201ENST00000314845 HOXA3O43365 443 aaPredicted RBP9.62□□□□□ -0.87
AMBRA1-201ENST00000314845 S100A7L2Q5SY68 101 aa9.62□□□□□ -0.87
AMBRA1-201ENST00000314845 ORAOV1Q8WV07 137 aa9.62□□□□□ -0.87
AMBRA1-201ENST00000314845 ARMS2P0C7Q2 107 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms