RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 F8WEM9 126 aa11.12□□□□□ -0.63
CLCN6-201ENST00000312413 K7EP13 123 aa11.12□□□□□ -0.63
CLCN6-201ENST00000312413 MLANAQ16655 118 aa11.12□□□□□ -0.63
CLCN6-201ENST00000312413 SHANK2-AS3Q9BTD1 123 aa11.12□□□□□ -0.63
CLCN6-201ENST00000312413 COL4A5P29400 1685 aa11.12□□□□□ -0.63
CLCN6-201ENST00000312413 SBF2Q86WG5 1849 aa11.12□□□□□ -0.63
CLCN6-201ENST00000312413 F8W1H4 67 aa11.12□□□□□ -0.63
CLCN6-201ENST00000312413 ATAD5Q96QE3 1844 aa11.12□□□□□ -0.63
CLCN6-201ENST00000312413 IL18BPO95998 194 aa11.12□□□□□ -0.63
CLCN6-201ENST00000312413 RPL32P62910 135 aaKnown RBP11.12□□□□□ -0.63
CLCN6-201ENST00000312413 ZFP36L1Q07352 338 aaKnown RBP11.12□□□□□ -0.63
CLCN6-201ENST00000312413 TMEM219Q86XT9 240 aa11.12□□□□□ -0.63
CLCN6-201ENST00000312413 SOCS3O14543 225 aa11.11□□□□□ -0.63
CLCN6-201ENST00000312413 ANAPC10Q9UM13 185 aa11.11□□□□□ -0.63
CLCN6-201ENST00000312413 GBF1Q92538 1859 aa11.11□□□□□ -0.63
CLCN6-201ENST00000312413 Q6ZWC4 215 aa11.11□□□□□ -0.63
CLCN6-201ENST00000312413 NRXN2Q9P2S2 1712 aa11.11□□□□□ -0.63
CLCN6-201ENST00000312413 TMEM213A2RRL7 107 aa11.11□□□□□ -0.63
CLCN6-201ENST00000312413 IGHV2-5P01817 119 aa11.11□□□□□ -0.63
CLCN6-201ENST00000312413 KLRD1Q13241 179 aa11.11□□□□□ -0.63
CLCN6-201ENST00000312413 FAM104BQ5XKR9 115 aa11.11□□□□□ -0.63
CLCN6-201ENST00000312413 KLHDC3Q9BQ90 382 aa11.11□□□□□ -0.63
CLCN6-201ENST00000312413 E9PLN8 166 aa11.11□□□□□ -0.63
CLCN6-201ENST00000312413 K7EP34 96 aa11.11□□□□□ -0.63
CLCN6-201ENST00000312413 IGHV3-53P01767 116 aa11.11□□□□□ -0.63
CLCN6-201ENST00000312413 CFHR2P36980 270 aa11.11□□□□□ -0.63
CLCN6-201ENST00000312413 GAGE1Q13065 139 aa11.11□□□□□ -0.63
CLCN6-201ENST00000312413 BUB1B-PAK6H3BSN5 160 aa11.1□□□□□ -0.63
CLCN6-201ENST00000312413 YPEL3P61236 119 aaPredicted RBP11.1□□□□□ -0.63
CLCN6-201ENST00000312413 GAFA1Q96PS6 74 aa11.1□□□□□ -0.63
CLCN6-201ENST00000312413 TCF15Q12870 199 aa11.1□□□□□ -0.63
CLCN6-201ENST00000312413 SLC25A16P16260 332 aa11.1□□□□□ -0.63
CLCN6-201ENST00000312413 C2orf66Q6UXQ4 117 aa11.1□□□□□ -0.63
CLCN6-201ENST00000312413 TRPT1Q86TN4 253 aaKnown RBP11.1□□□□□ -0.63
CLCN6-201ENST00000312413 C11orf44Q8N8P7 122 aa11.1□□□□□ -0.63
CLCN6-201ENST00000312413 TMEM75Q8N9X5 138 aa11.1□□□□□ -0.63
CLCN6-201ENST00000312413 PRSS46E5RG02 174 aa11.1□□□□□ -0.63
CLCN6-201ENST00000312413 C20orf204Q6ZNR8 217 aa11.1□□□□□ -0.63
CLCN6-201ENST00000312413 SPANXDQ9BXN6 97 aa11.1□□□□□ -0.63
CLCN6-201ENST00000312413 TP53TG1Q9Y2A0 90 aa11.1□□□□□ -0.63
CLCN6-201ENST00000312413 POLR2AP24928 1970 aaKnown RBP11.09□□□□□ -0.63
CLCN6-201ENST00000312413 COX8AP10176 69 aa11.09□□□□□ -0.63
CLCN6-201ENST00000312413 CFPP27918 469 aa11.09□□□□□ -0.63
CLCN6-201ENST00000312413 IGKV1D-17A0A075B6S4 117 aa11.09□□□□□ -0.63
CLCN6-201ENST00000312413 IGLL1P15814 213 aa11.09□□□□□ -0.63
CLCN6-201ENST00000312413 CFHR1Q03591 330 aa11.09□□□□□ -0.63
CLCN6-201ENST00000312413 Q8N8P6 123 aa11.09□□□□□ -0.63
CLCN6-201ENST00000312413 USMG5Q96IX5 58 aa11.09□□□□□ -0.63
CLCN6-201ENST00000312413 SRSF8Q9BRL6 282 aaKnown RBP11.09□□□□□ -0.63
CLCN6-201ENST00000312413 TP53BP1Q12888 1972 aaPredicted RBP11.09□□□□□ -0.63
CLCN6-201ENST00000312413 CHD5Q8TDI0 1954 aa11.09□□□□□ -0.63
CLCN6-201ENST00000312413 SSC4DQ8WTU2 575 aa11.08□□□□□ -0.64
CLCN6-201ENST00000312413 TMEM141Q96I45 108 aa11.08□□□□□ -0.64
CLCN6-201ENST00000312413 CYYR1Q96J86 154 aa11.08□□□□□ -0.64
CLCN6-201ENST00000312413 PRDM6Q9NQX0 595 aa11.08□□□□□ -0.64
CLCN6-201ENST00000312413 IGKV1-16P04430 117 aa11.08□□□□□ -0.64
CLCN6-201ENST00000312413 RHPN1-AS1Q9BWJ2 59 aa11.08□□□□□ -0.64
CLCN6-201ENST00000312413 DOCK10Q96BY6 2186 aa11.08□□□□□ -0.64
CLCN6-201ENST00000312413 MMP23AO75900 390 aa11.08□□□□□ -0.64
CLCN6-201ENST00000312413 CLPSP04118 112 aa11.08□□□□□ -0.64
CLCN6-201ENST00000312413 C10orf91Q5T1B1 145 aa11.08□□□□□ -0.64
CLCN6-201ENST00000312413 NCOR1P1Q9H4R4 102 aa11.08□□□□□ -0.64
CLCN6-201ENST00000312413 ABCA7Q8IZY2 2146 aa11.08□□□□□ -0.64
CLCN6-201ENST00000312413 SAP30O75446 220 aa11.08□□□□□ -0.64
CLCN6-201ENST00000312413 IGHV1-24A0A0C4DH33 117 aa11.07□□□□□ -0.64
CLCN6-201ENST00000312413 M0R1W7 72 aa11.07□□□□□ -0.64
CLCN6-201ENST00000312413 SS18Q15532 418 aa11.07□□□□□ -0.64
CLCN6-201ENST00000312413 SCN10AQ9Y5Y9 1956 aa11.07□□□□□ -0.64
CLCN6-201ENST00000312413 LGALS9BQ3B8N2 356 aa11.07□□□□□ -0.64
CLCN6-201ENST00000312413 LGALS9CQ6DKI2 356 aa11.07□□□□□ -0.64
CLCN6-201ENST00000312413 PARP14Q460N5 1801 aa11.07□□□□□ -0.64
CLCN6-201ENST00000312413 IFITM1P13164 125 aa11.07□□□□□ -0.64
CLCN6-201ENST00000312413 PMVKQ15126 192 aa11.07□□□□□ -0.64
CLCN6-201ENST00000312413 FAM223BA6NKX1 122 aa11.07□□□□□ -0.64
CLCN6-201ENST00000312413 FAM223AQ8IWN6 122 aa11.07□□□□□ -0.64
CLCN6-201ENST00000312413 ATP6V0BQ99437 205 aa11.07□□□□□ -0.64
CLCN6-201ENST00000312413 A0A1W2PPI3 338 aa11.06□□□□□ -0.64
CLCN6-201ENST00000312413 EFNA4P52798 201 aa11.06□□□□□ -0.64
CLCN6-201ENST00000312413 UTF1Q5T230 341 aa11.06□□□□□ -0.64
CLCN6-201ENST00000312413 BVES-AS1Q5T3Y7 98 aa11.06□□□□□ -0.64
CLCN6-201ENST00000312413 A0A1W2PPM0 123 aa11.06□□□□□ -0.64
CLCN6-201ENST00000312413 GAGE12HA6NDE8 117 aa11.06□□□□□ -0.64
CLCN6-201ENST00000312413 NTN3O00634 580 aaPredicted RBP11.06□□□□□ -0.64
CLCN6-201ENST00000312413 LTBRP36941 435 aa11.06□□□□□ -0.64
CLCN6-201ENST00000312413 SUMO4Q6EEV6 95 aa11.06□□□□□ -0.64
CLCN6-201ENST00000312413 PRSS57Q6UWY2 283 aa11.06□□□□□ -0.64
CLCN6-201ENST00000312413 FOXL2NBQ6ZUU3 175 aa11.06□□□□□ -0.64
CLCN6-201ENST00000312413 FAM231DQ6ZW35 169 aa11.06□□□□□ -0.64
CLCN6-201ENST00000312413 V9GYV3 84 aa11.06□□□□□ -0.64
CLCN6-201ENST00000312413 CADP27708 2225 aa11.06□□□□□ -0.64
CLCN6-201ENST00000312413 IGKV1-6A0A0C4DH72 117 aa11.06□□□□□ -0.64
CLCN6-201ENST00000312413 H3BUX3 64 aa11.06□□□□□ -0.64
CLCN6-201ENST00000312413 MED12Q93074 2177 aa11.06□□□□□ -0.64
CLCN6-201ENST00000312413 HEATR1Q9H583 2144 aaKnown RBP11.06□□□□□ -0.64
CLCN6-201ENST00000312413 PATJQ8NI35 1801 aa11.06□□□□□ -0.64
CLCN6-201ENST00000312413 FGF6P10767 208 aa11.05□□□□□ -0.64
CLCN6-201ENST00000312413 MORN5Q5VZ52 161 aa11.05□□□□□ -0.64
CLCN6-201ENST00000312413 C1QTNF4Q9BXJ3 329 aa11.05□□□□□ -0.64
CLCN6-201ENST00000312413 UBL5Q9BZL1 73 aa11.05□□□□□ -0.64
CLCN6-201ENST00000312413 PAX9P55771 341 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms