RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 CASC10Q5T4H9 136 aa8.75□□□□□ -1.01
SCFD1-201ENST00000311943 ZNF503Q96F45 646 aa8.75□□□□□ -1.01
SCFD1-201ENST00000311943 FAM167A-AS1Q96KT0 104 aa8.75□□□□□ -1.01
SCFD1-201ENST00000311943 RARRES2Q99969 163 aa8.75□□□□□ -1.01
SCFD1-201ENST00000311943 HLA-DRB4X5D2U9 266 aa8.75□□□□□ -1.01
SCFD1-201ENST00000311943 HYDINQ4G0P3 5121 aa8.75□□□□□ -1.01
SCFD1-201ENST00000311943 IGHV3OR16-12A0A075B7B8 117 aa8.74□□□□□ -1.01
SCFD1-201ENST00000311943 A0A0J9YX75 114 aa8.74□□□□□ -1.01
SCFD1-201ENST00000311943 M0R2Z0 102 aa8.74□□□□□ -1.01
SCFD1-201ENST00000311943 M0R3E3 92 aa8.74□□□□□ -1.01
SCFD1-201ENST00000311943 RPL7P18124 248 aaKnown RBP8.74□□□□□ -1.01
SCFD1-201ENST00000311943 RAB31Q13636 194 aa8.74□□□□□ -1.01
SCFD1-201ENST00000311943 OR11H4Q8NGC9 324 aa8.74□□□□□ -1.01
SCFD1-201ENST00000311943 SAT2Q96F10 170 aaPredicted RBP8.74□□□□□ -1.01
SCFD1-201ENST00000311943 SH3BGRL3Q9H299 93 aa8.74□□□□□ -1.01
SCFD1-201ENST00000311943 X6R8D5 127 aa8.74□□□□□ -1.01
SCFD1-201ENST00000311943 SACSQ9NZJ4 4579 aa8.73□□□□□ -1.01
SCFD1-201ENST00000311943 TRAV12-2A0A075B6T6 113 aa8.73□□□□□ -1.01
SCFD1-201ENST00000311943 NDUFB4O95168 129 aa8.73□□□□□ -1.01
SCFD1-201ENST00000311943 GIPP09681 153 aaPredicted RBP8.73□□□□□ -1.01
SCFD1-201ENST00000311943 RBMY1A1P0DJD3 496 aaKnown RBP8.73□□□□□ -1.01
SCFD1-201ENST00000311943 RBMY1CP0DJD4 496 aa8.73□□□□□ -1.01
SCFD1-201ENST00000311943 CNN1P51911 297 aaKnown RBP8.73□□□□□ -1.01
SCFD1-201ENST00000311943 CMC4P56277 68 aaPredicted RBP8.73□□□□□ -1.01
SCFD1-201ENST00000311943 PMS2P11Q13670 270 aa8.73□□□□□ -1.01
SCFD1-201ENST00000311943 RBMY1FQ15415 496 aaKnown RBP8.73□□□□□ -1.01
SCFD1-201ENST00000311943 ZNF767PQ75MW2 155 aa8.73□□□□□ -1.01
SCFD1-201ENST00000311943 EXOC3-AS1Q8N2X6 119 aa8.73□□□□□ -1.01
SCFD1-201ENST00000311943 HSD17B11Q8NBQ5 300 aa8.73□□□□□ -1.01
SCFD1-201ENST00000311943 ZNF738Q8NE65 137 aa8.73□□□□□ -1.01
SCFD1-201ENST00000311943 BLNKQ8WV28 456 aa8.73□□□□□ -1.01
SCFD1-201ENST00000311943 ZNF331Q9NQX6 463 aaPredicted RBP8.73□□□□□ -1.01
SCFD1-201ENST00000311943 PFDN2Q9UHV9 154 aa8.73□□□□□ -1.01
SCFD1-201ENST00000311943 ELOA3CA0A087WX78 387 aaPredicted RBP8.73□□□□□ -1.01
SCFD1-201ENST00000311943 PET100P0DJ07 73 aa8.73□□□□□ -1.01
SCFD1-201ENST00000311943 NUP62P37198 522 aaPredicted RBP8.73□□□□□ -1.01
SCFD1-201ENST00000311943 RAB2AP61019 212 aa8.73□□□□□ -1.01
SCFD1-201ENST00000311943 SPINK13Q1W4C9 94 aa8.73□□□□□ -1.01
SCFD1-201ENST00000311943 FFAR4Q5NUL3 377 aa8.73□□□□□ -1.01
SCFD1-201ENST00000311943 AMTNQ6UX39 209 aa8.73□□□□□ -1.01
SCFD1-201ENST00000311943 LYSTQ99698 3801 aa8.73□□□□□ -1.01
SCFD1-201ENST00000311943 PLA2G2EQ9NZK7 142 aa8.73□□□□□ -1.01
SCFD1-201ENST00000311943 A0A087X0K7 114 aa8.72□□□□□ -1.01
SCFD1-201ENST00000311943 ID1P41134 155 aa8.72□□□□□ -1.01
SCFD1-201ENST00000311943 RPL7L1Q6DKI1 246 aaKnown RBP8.72□□□□□ -1.01
SCFD1-201ENST00000311943 FOXI2Q6ZQN5 318 aa8.72□□□□□ -1.01
SCFD1-201ENST00000311943 BAP18Q8IXM2 172 aa8.72□□□□□ -1.01
SCFD1-201ENST00000311943 MFFQ9GZY8 342 aa8.72□□□□□ -1.01
SCFD1-201ENST00000311943 hCG_2014768A0A024R1R8 64 aa8.71□□□□□ -1.01
SCFD1-201ENST00000311943 UBE2CO00762 179 aa8.71□□□□□ -1.01
SCFD1-201ENST00000311943 HIST1H1AQ02539 215 aaPredicted RBP8.71□□□□□ -1.01
SCFD1-201ENST00000311943 BPIFA4PQ86YQ2 179 aa8.71□□□□□ -1.01
SCFD1-201ENST00000311943 C1orf158Q8N1D5 194 aa8.71□□□□□ -1.01
SCFD1-201ENST00000311943 LRRC20Q8TCA0 184 aa8.71□□□□□ -1.01
SCFD1-201ENST00000311943 AQP10Q96PS8 301 aa8.71□□□□□ -1.01
SCFD1-201ENST00000311943 RPRMQ9NS64 109 aa8.71□□□□□ -1.01
SCFD1-201ENST00000311943 TNFSF18Q9UNG2 199 aa8.71□□□□□ -1.01
SCFD1-201ENST00000311943 IGHV4-28A0A0C4DH34 117 aa8.71□□□□□ -1.02
SCFD1-201ENST00000311943 J3KRW8 73 aa8.71□□□□□ -1.02
SCFD1-201ENST00000311943 ARPC5O15511 151 aa8.71□□□□□ -1.02
SCFD1-201ENST00000311943 CRXO43186 299 aaPredicted RBP8.71□□□□□ -1.02
SCFD1-201ENST00000311943 NANOS2P60321 138 aaKnown RBP8.71□□□□□ -1.02
SCFD1-201ENST00000311943 PSG3Q16557 428 aa8.71□□□□□ -1.02
SCFD1-201ENST00000311943 SSX7Q7RTT5 188 aa8.71□□□□□ -1.02
SCFD1-201ENST00000311943 Q8NAQ8 132 aa8.71□□□□□ -1.02
SCFD1-201ENST00000311943 OR1L4Q8NGR5 311 aa8.71□□□□□ -1.02
SCFD1-201ENST00000311943 GATAD1Q8WUU5 269 aa8.71□□□□□ -1.02
SCFD1-201ENST00000311943 RPUSD4Q96CM3 377 aaKnown RBP8.71□□□□□ -1.02
SCFD1-201ENST00000311943 HRH4Q9H3N8 390 aa8.71□□□□□ -1.02
SCFD1-201ENST00000311943 MPDU1O75352 247 aa8.7□□□□□ -1.02
SCFD1-201ENST00000311943 CD300CQ08708 224 aa8.7□□□□□ -1.02
SCFD1-201ENST00000311943 ERCC8Q13216 396 aa8.7□□□□□ -1.02
SCFD1-201ENST00000311943 PXDC1Q5TGL8 231 aa8.7□□□□□ -1.02
SCFD1-201ENST00000311943 Q6ZQT7 251 aa8.7□□□□□ -1.02
SCFD1-201ENST00000311943 IL17DQ8TAD2 202 aa8.7□□□□□ -1.02
SCFD1-201ENST00000311943 PHYHIPLQ96FC7 376 aa8.7□□□□□ -1.02
SCFD1-201ENST00000311943 GPR82Q96P67 336 aa8.7□□□□□ -1.02
SCFD1-201ENST00000311943 CELA1Q9UNI1 258 aa8.7□□□□□ -1.02
SCFD1-201ENST00000311943 TP53TG1Q9Y2A0 90 aa8.7□□□□□ -1.02
SCFD1-201ENST00000311943 TRBV19A0A075B6N1 114 aa8.7□□□□□ -1.02
SCFD1-201ENST00000311943 SPP1P10451 314 aa8.7□□□□□ -1.02
SCFD1-201ENST00000311943 ATP6V0CP27449 155 aa8.7□□□□□ -1.02
SCFD1-201ENST00000311943 MEOX2P50222 304 aa8.7□□□□□ -1.02
SCFD1-201ENST00000311943 EBLN2Q6P2I7 272 aa8.7□□□□□ -1.02
SCFD1-201ENST00000311943 OR8A1Q8NGG7 326 aa8.7□□□□□ -1.02
SCFD1-201ENST00000311943 SCGB1C1Q8TD33 95 aa8.7□□□□□ -1.02
SCFD1-201ENST00000311943 FXYD5Q96DB9 178 aa8.7□□□□□ -1.02
SCFD1-201ENST00000311943 PFDN5Q99471 154 aa8.7□□□□□ -1.02
SCFD1-201ENST00000311943 A0A1B0GVG6 124 aa8.69□□□□□ -1.02
SCFD1-201ENST00000311943 IFNA5P01569 189 aa8.69□□□□□ -1.02
SCFD1-201ENST00000311943 EMP1P54849 157 aa8.69□□□□□ -1.02
SCFD1-201ENST00000311943 FAM122CQ6P4D5 195 aa8.69□□□□□ -1.02
SCFD1-201ENST00000311943 PSG9Q00887 426 aa8.68□□□□□ -1.02
SCFD1-201ENST00000311943 CYTL1Q9NRR1 136 aa8.68□□□□□ -1.02
SCFD1-201ENST00000311943 FUT9Q9Y231 359 aa8.68□□□□□ -1.02
SCFD1-201ENST00000311943 RYR2Q92736 4967 aa8.68□□□□□ -1.02
SCFD1-201ENST00000311943 ZNF705EA8MWA4 302 aaPredicted RBP8.68□□□□□ -1.02
SCFD1-201ENST00000311943 RHOBP62745 196 aa8.68□□□□□ -1.02
SCFD1-201ENST00000311943 MORN3Q6PF18 240 aaPredicted RBP8.68□□□□□ -1.02
SCFD1-201ENST00000311943 LCN15Q6UWW0 184 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms