RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 COLQQ9Y215 455 aaPredicted RBP10.75□□□□□ -0.69
SNED1-201ENST00000310397 MINOS1-NBL1R4GNA1 71 aa10.75□□□□□ -0.69
SNED1-201ENST00000310397 TRAV12-3A0A0B4J271 114 aa10.75□□□□□ -0.69
SNED1-201ENST00000310397 IGHV1-3A0A0C4DH29 117 aa10.75□□□□□ -0.69
SNED1-201ENST00000310397 TMEM178BH3BS89 294 aa10.75□□□□□ -0.69
SNED1-201ENST00000310397 SH2D1AO60880 128 aa10.75□□□□□ -0.69
SNED1-201ENST00000310397 C1orf147Q96MC9 270 aaPredicted RBP10.75□□□□□ -0.69
SNED1-201ENST00000310397 PTPN13Q12923 2485 aa10.74□□□□□ -0.69
SNED1-201ENST00000310397 C10orf55Q5SWW7 151 aa10.74□□□□□ -0.69
SNED1-201ENST00000310397 TRAV8-1A0A0A6YYK1 113 aa10.74□□□□□ -0.69
SNED1-201ENST00000310397 TMEM75Q8N9X5 138 aa10.74□□□□□ -0.69
SNED1-201ENST00000310397 ZNF492Q9P255 531 aa10.74□□□□□ -0.69
SNED1-201ENST00000310397 SIGLEC9Q9Y336 463 aa10.74□□□□□ -0.69
SNED1-201ENST00000310397 GLMPQ8WWB7 406 aa10.74□□□□□ -0.69
SNED1-201ENST00000310397 FOXG1P55316 489 aaPredicted RBP10.74□□□□□ -0.69
SNED1-201ENST00000310397 PAX9P55771 341 aa10.74□□□□□ -0.69
SNED1-201ENST00000310397 ZC2HC1BQ5TFG8 222 aa10.74□□□□□ -0.69
SNED1-201ENST00000310397 TMEM86BQ8N661 226 aa10.74□□□□□ -0.69
SNED1-201ENST00000310397 IGLC2P0DOY2 106 aa10.74□□□□□ -0.69
SNED1-201ENST00000310397 IGLC3P0DOY3 106 aa10.74□□□□□ -0.69
SNED1-201ENST00000310397 ETV2O00321 342 aaPredicted RBP10.74□□□□□ -0.69
SNED1-201ENST00000310397 LMO1P25800 156 aa10.74□□□□□ -0.69
SNED1-201ENST00000310397 ZNF581Q9P0T4 197 aa10.74□□□□□ -0.69
SNED1-201ENST00000310397 MLNRO43193 412 aa10.74□□□□□ -0.69
SNED1-201ENST00000310397 LILRA1O75019 489 aa10.73□□□□□ -0.69
SNED1-201ENST00000310397 TMEM158Q8WZ71 300 aa10.73□□□□□ -0.69
SNED1-201ENST00000310397 PGPEP1Q9NXJ5 209 aa10.73□□□□□ -0.69
SNED1-201ENST00000310397 WDR87Q6ZQQ6 2873 aa10.73□□□□□ -0.69
SNED1-201ENST00000310397 TRBV20-1A0A075B6N2 111 aa10.73□□□□□ -0.69
SNED1-201ENST00000310397 COLCA1Q6ZS62 124 aa10.73□□□□□ -0.69
SNED1-201ENST00000310397 OVOL2Q9BRP0 275 aa10.73□□□□□ -0.69
SNED1-201ENST00000310397 IGHV3OR16-10A0A075B7F0 116 aa10.73□□□□□ -0.69
SNED1-201ENST00000310397 B3GALT5-AS1P59052 145 aa10.73□□□□□ -0.69
SNED1-201ENST00000310397 NPFFR1Q9GZQ6 430 aa10.73□□□□□ -0.69
SNED1-201ENST00000310397 TDGF1P13385 188 aa10.73□□□□□ -0.69
SNED1-201ENST00000310397 C9orf139Q6ZV77 190 aa10.73□□□□□ -0.69
SNED1-201ENST00000310397 CHAC1Q9BUX1 264 aa10.73□□□□□ -0.69
SNED1-201ENST00000310397 RPL15P61313 204 aaKnown RBP10.72□□□□□ -0.69
SNED1-201ENST00000310397 FAM231DQ6ZW35 169 aa10.72□□□□□ -0.69
SNED1-201ENST00000310397 Q86TA4 180 aa10.72□□□□□ -0.69
SNED1-201ENST00000310397 FAM208BQ5VWN6 2430 aa10.72□□□□□ -0.69
SNED1-201ENST00000310397 TRGV2A0A075B6R0 118 aa10.72□□□□□ -0.69
SNED1-201ENST00000310397 IGKV1-6A0A0C4DH72 117 aa10.72□□□□□ -0.69
SNED1-201ENST00000310397 BMPERQ8N8U9 685 aa10.72□□□□□ -0.69
SNED1-201ENST00000310397 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.72□□□□□ -0.69
SNED1-201ENST00000310397 C5orf64Q2M2E5 130 aa10.72□□□□□ -0.69
SNED1-201ENST00000310397 CFAP161Q6P656 301 aa10.72□□□□□ -0.69
SNED1-201ENST00000310397 TMEM8BA6NDV4 472 aa10.72□□□□□ -0.69
SNED1-201ENST00000310397 VDAC2P45880 294 aaPredicted RBP10.72□□□□□ -0.69
SNED1-201ENST00000310397 ZCCHC24Q8N2G6 241 aaKnown RBP10.72□□□□□ -0.69
SNED1-201ENST00000310397 ABHD17AQ96GS6 310 aa10.72□□□□□ -0.69
SNED1-201ENST00000310397 NAA38Q9BRA0 125 aaKnown RBP10.72□□□□□ -0.69
SNED1-201ENST00000310397 SMIM27A0A1W2PRY6 76 aa10.72□□□□□ -0.69
SNED1-201ENST00000310397 ADAMTSL5Q6ZMM2 481 aa10.72□□□□□ -0.69
SNED1-201ENST00000310397 Q6ZWC4 215 aa10.72□□□□□ -0.69
SNED1-201ENST00000310397 AMN1Q8IY45 258 aa10.72□□□□□ -0.69
SNED1-201ENST00000310397 METRNQ9UJH8 293 aa10.72□□□□□ -0.69
SNED1-201ENST00000310397 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.72□□□□□ -0.69
SNED1-201ENST00000310397 C9orf118A6NHY6 69 aa10.72□□□□□ -0.69
SNED1-201ENST00000310397 SELLP14151 372 aa10.72□□□□□ -0.69
SNED1-201ENST00000310397 C7orf69Q9H7B7 122 aa10.72□□□□□ -0.69
SNED1-201ENST00000310397 LGALS1P09382 135 aaKnown RBP10.71□□□□□ -0.69
SNED1-201ENST00000310397 CD24P25063 80 aa10.71□□□□□ -0.69
SNED1-201ENST00000310397 SSBP2P81877 361 aaPredicted RBP10.71□□□□□ -0.69
SNED1-201ENST00000310397 IGKV1D-17A0A075B6S4 117 aa10.71□□□□□ -0.69
SNED1-201ENST00000310397 NCOR1P1Q9H4R4 102 aa10.71□□□□□ -0.69
SNED1-201ENST00000310397 WNT2P09544 360 aa10.71□□□□□ -0.69
SNED1-201ENST00000310397 BUB1B-PAK6H3BSN5 160 aa10.71□□□□□ -0.7
SNED1-201ENST00000310397 TMEM155Q4W5P6 130 aa10.71□□□□□ -0.7
SNED1-201ENST00000310397 IGHV3-11P01762 117 aa10.71□□□□□ -0.7
SNED1-201ENST00000310397 SPINK8P0C7L1 97 aa10.71□□□□□ -0.7
SNED1-201ENST00000310397 IGKV1-16P04430 117 aa10.71□□□□□ -0.7
SNED1-201ENST00000310397 C2orf82Q6UX34 121 aa10.71□□□□□ -0.7
SNED1-201ENST00000310397 ANKHD1Q8IWZ3 2542 aaKnown RBP10.7□□□□□ -0.7
SNED1-201ENST00000310397 LINC00479Q96M42 142 aa10.7□□□□□ -0.7
SNED1-201ENST00000310397 V9GYV3 84 aa10.7□□□□□ -0.7
SNED1-201ENST00000310397 E9PLN8 166 aa10.7□□□□□ -0.7
SNED1-201ENST00000310397 F8W1H4 67 aa10.7□□□□□ -0.7
SNED1-201ENST00000310397 M0R1W7 72 aa10.7□□□□□ -0.7
SNED1-201ENST00000310397 MALP21145 153 aa10.7□□□□□ -0.7
SNED1-201ENST00000310397 TMEM249Q2WGJ8 235 aa10.7□□□□□ -0.7
SNED1-201ENST00000310397 STHQ8IWL8 128 aa10.7□□□□□ -0.7
SNED1-201ENST00000310397 IGKV3D-20A0A0C4DH25 116 aa10.7□□□□□ -0.7
SNED1-201ENST00000310397 C5orf24Q7Z6I8 188 aa10.7□□□□□ -0.7
SNED1-201ENST00000310397 KLF2Q9Y5W3 355 aaPredicted RBP10.7□□□□□ -0.7
SNED1-201ENST00000310397 COX8AP10176 69 aa10.7□□□□□ -0.7
SNED1-201ENST00000310397 TEX43Q6ZNM6 134 aa10.7□□□□□ -0.7
SNED1-201ENST00000310397 PLAURQ03405 335 aa10.69□□□□□ -0.7
SNED1-201ENST00000310397 CRPP02741 224 aa10.69□□□□□ -0.7
SNED1-201ENST00000310397 THBDP07204 575 aa10.69□□□□□ -0.7
SNED1-201ENST00000310397 A0A1B0GUS0 222 aa10.69□□□□□ -0.7
SNED1-201ENST00000310397 HAX1O00165 279 aa10.69□□□□□ -0.7
SNED1-201ENST00000310397 CYYR1Q96J86 154 aa10.69□□□□□ -0.7
SNED1-201ENST00000310397 SHANK2-AS3Q9BTD1 123 aa10.69□□□□□ -0.7
SNED1-201ENST00000310397 NPSP0C0P6 89 aa10.69□□□□□ -0.7
SNED1-201ENST00000310397 SRRM4A7MD48 611 aaKnown RBP10.69□□□□□ -0.7
SNED1-201ENST00000310397 GAFA1Q96PS6 74 aa10.69□□□□□ -0.7
SNED1-201ENST00000310397 ARMS2P0C7Q2 107 aa10.69□□□□□ -0.7
SNED1-201ENST00000310397 TRAV41A0A0B4J266 112 aa10.68□□□□□ -0.7
SNED1-201ENST00000310397 IL15RAQ13261 267 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms