RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 BUB1B-PAK6H3BSN5 160 aa10.69□□□□□ -0.7
DDX54-201ENST00000306014 KLRD1Q13241 179 aa10.69□□□□□ -0.7
DDX54-201ENST00000306014 PSG3Q16557 428 aa10.69□□□□□ -0.7
DDX54-201ENST00000306014 Q8TCH9 128 aa10.69□□□□□ -0.7
DDX54-201ENST00000306014 TRGV3P03979 118 aa10.69□□□□□ -0.7
DDX54-201ENST00000306014 POU2AF1Q16633 256 aa10.69□□□□□ -0.7
DDX54-201ENST00000306014 FAM71F2Q6NXP2 309 aa10.69□□□□□ -0.7
DDX54-201ENST00000306014 ID1P41134 155 aa10.69□□□□□ -0.7
DDX54-201ENST00000306014 LY6DQ14210 128 aa10.69□□□□□ -0.7
DDX54-201ENST00000306014 ZNF672Q499Z4 452 aaPredicted RBP10.69□□□□□ -0.7
DDX54-201ENST00000306014 FXYD5Q96DB9 178 aa10.69□□□□□ -0.7
DDX54-201ENST00000306014 LY6HO94772 140 aa10.68□□□□□ -0.7
DDX54-201ENST00000306014 RHOGP84095 191 aa10.68□□□□□ -0.7
DDX54-201ENST00000306014 HSD52Q0P140 79 aa10.68□□□□□ -0.7
DDX54-201ENST00000306014 NCOR1P1Q9H4R4 102 aa10.68□□□□□ -0.7
DDX54-201ENST00000306014 NXT2Q9NPJ8 142 aaKnown RBP10.68□□□□□ -0.7
DDX54-201ENST00000306014 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.68□□□□□ -0.7
DDX54-201ENST00000306014 SH2D1AO60880 128 aa10.68□□□□□ -0.7
DDX54-201ENST00000306014 PPBPP02775 128 aa10.68□□□□□ -0.7
DDX54-201ENST00000306014 IGHV1-24A0A0C4DH33 117 aa10.68□□□□□ -0.7
DDX54-201ENST00000306014 IGKV3-20P01619 116 aa10.68□□□□□ -0.7
DDX54-201ENST00000306014 RPL13AP40429 203 aaKnown RBP10.68□□□□□ -0.7
DDX54-201ENST00000306014 MORN5Q5VZ52 161 aa10.68□□□□□ -0.7
DDX54-201ENST00000306014 SFTA2Q6UW10 78 aa10.68□□□□□ -0.7
DDX54-201ENST00000306014 FAM208BQ5VWN6 2430 aa10.68□□□□□ -0.7
DDX54-201ENST00000306014 Q6ZS92 163 aa10.68□□□□□ -0.7
DDX54-201ENST00000306014 ACACBO00763 2458 aa10.67□□□□□ -0.7
DDX54-201ENST00000306014 GFRA4Q9GZZ7 299 aa10.67□□□□□ -0.7
DDX54-201ENST00000306014 MRPL16Q9NX20 251 aaKnown RBP10.67□□□□□ -0.7
DDX54-201ENST00000306014 IGLV3-9A0A075B6K5 115 aa10.67□□□□□ -0.7
DDX54-201ENST00000306014 DPM2O94777 84 aa10.67□□□□□ -0.7
DDX54-201ENST00000306014 BRWD1-AS2P59051 145 aa10.67□□□□□ -0.7
DDX54-201ENST00000306014 TMEM213A2RRL7 107 aa10.67□□□□□ -0.7
DDX54-201ENST00000306014 GAGE1Q13065 139 aa10.67□□□□□ -0.7
DDX54-201ENST00000306014 ZNF492Q9P255 531 aa10.67□□□□□ -0.7
DDX54-201ENST00000306014 SPG11Q96JI7 2443 aa10.66□□□□□ -0.7
DDX54-201ENST00000306014 A0A0G2JLM5 398 aa10.66□□□□□ -0.7
DDX54-201ENST00000306014 A0A1B0GWB2 263 aa10.66□□□□□ -0.7
DDX54-201ENST00000306014 GAGE12BA1L429 117 aa10.66□□□□□ -0.7
DDX54-201ENST00000306014 TMEM170BQ5T4T1 132 aa10.66□□□□□ -0.7
DDX54-201ENST00000306014 GTSCR1Q86UQ5 136 aa10.66□□□□□ -0.7
DDX54-201ENST00000306014 PRSS2P07478 247 aa10.66□□□□□ -0.7
DDX54-201ENST00000306014 TMEM155Q4W5P6 130 aa10.66□□□□□ -0.7
DDX54-201ENST00000306014 CT83Q5H943 113 aa10.66□□□□□ -0.7
DDX54-201ENST00000306014 KIR2DL4Q99706 377 aa10.66□□□□□ -0.7
DDX54-201ENST00000306014 SHANK2-AS3Q9BTD1 123 aa10.66□□□□□ -0.7
DDX54-201ENST00000306014 PLXNB1O43157 2135 aa10.66□□□□□ -0.7
DDX54-201ENST00000306014 OR9G4Q8NGQ1 327 aa10.66□□□□□ -0.7
DDX54-201ENST00000306014 CD5LO43866 347 aa10.65□□□□□ -0.7
DDX54-201ENST00000306014 IGKCP01834 107 aa10.65□□□□□ -0.7
DDX54-201ENST00000306014 COL8A2P25067 703 aa10.65□□□□□ -0.7
DDX54-201ENST00000306014 ASIPP42127 132 aa10.65□□□□□ -0.7
DDX54-201ENST00000306014 FAM159AQ6UWV7 190 aa10.65□□□□□ -0.7
DDX54-201ENST00000306014 GLMPQ8WWB7 406 aa10.65□□□□□ -0.7
DDX54-201ENST00000306014 APOMO95445 188 aa10.65□□□□□ -0.7
DDX54-201ENST00000306014 IGHV3-11P01762 117 aa10.65□□□□□ -0.7
DDX54-201ENST00000306014 P0C879 139 aa10.65□□□□□ -0.7
DDX54-201ENST00000306014 C15orf32Q32M92 178 aa10.65□□□□□ -0.7
DDX54-201ENST00000306014 PSMG4Q5JS54 123 aa10.65□□□□□ -0.7
DDX54-201ENST00000306014 BCL6BQ8N143 479 aaPredicted RBP10.65□□□□□ -0.7
DDX54-201ENST00000306014 IGKV1OR2-108A0A075B7D4 117 aa10.65□□□□□ -0.7
DDX54-201ENST00000306014 PROP1O75360 226 aa10.65□□□□□ -0.7
DDX54-201ENST00000306014 LOXP28300 417 aaPredicted RBP10.65□□□□□ -0.7
DDX54-201ENST00000306014 C5orf64Q2M2E5 130 aa10.65□□□□□ -0.7
DDX54-201ENST00000306014 EBLN2Q6P2I7 272 aa10.65□□□□□ -0.7
DDX54-201ENST00000306014 SLC50A1Q9BRV3 221 aa10.65□□□□□ -0.7
DDX54-201ENST00000306014 LINC00527Q9UJ94 153 aa10.65□□□□□ -0.7
DDX54-201ENST00000306014 SAMD5Q5TGI4 173 aa10.65□□□□□ -0.71
DDX54-201ENST00000306014 DDB2Q92466 427 aa10.65□□□□□ -0.71
DDX54-201ENST00000306014 VKORC1Q9BQB6 163 aa10.65□□□□□ -0.71
DDX54-201ENST00000306014 WISP2O76076 250 aa10.64□□□□□ -0.71
DDX54-201ENST00000306014 NEU4Q8WWR8 484 aaPredicted RBP10.64□□□□□ -0.71
DDX54-201ENST00000306014 FAM215AQ9Y5M1 114 aa10.64□□□□□ -0.71
DDX54-201ENST00000306014 FAM231BA6NCW3 169 aa10.64□□□□□ -0.71
DDX54-201ENST00000306014 E7EQL1 145 aa10.64□□□□□ -0.71
DDX54-201ENST00000306014 LGALS3P17931 250 aaKnown RBP10.64□□□□□ -0.71
DDX54-201ENST00000306014 ZNF56Q15929 161 aa10.64□□□□□ -0.71
DDX54-201ENST00000306014 LYPD1Q8N2G4 141 aa10.64□□□□□ -0.71
DDX54-201ENST00000306014 ZNF418Q8TF45 676 aaPredicted RBP10.64□□□□□ -0.71
DDX54-201ENST00000306014 DPF1Q92782 380 aa10.64□□□□□ -0.71
DDX54-201ENST00000306014 ANKHD1Q8IWZ3 2542 aaKnown RBP10.64□□□□□ -0.71
DDX54-201ENST00000306014 KIR3DS1Q14943 382 aa10.64□□□□□ -0.71
DDX54-201ENST00000306014 C8orf49Q96NF6 230 aa10.64□□□□□ -0.71
DDX54-201ENST00000306014 K7ENP7 123 aa10.63□□□□□ -0.71
DDX54-201ENST00000306014 RNF5Q99942 180 aa10.63□□□□□ -0.71
DDX54-201ENST00000306014 TRBV19A0A075B6N1 114 aa10.63□□□□□ -0.71
DDX54-201ENST00000306014 TEX36Q5VZQ5 186 aa10.63□□□□□ -0.71
DDX54-201ENST00000306014 A0A1W2PNU3 283 aaPredicted RBP10.63□□□□□ -0.71
DDX54-201ENST00000306014 RNASE4P34096 147 aaKnown RBP10.63□□□□□ -0.71
DDX54-201ENST00000306014 SRSF1Q07955 248 aaKnown RBP eCLIP10.63□□□□□ -0.71
DDX54-201ENST00000306014 C10orf142B7Z368 130 aa10.62□□□□□ -0.71
DDX54-201ENST00000306014 OR5A1Q8NGJ0 315 aa10.62□□□□□ -0.71
DDX54-201ENST00000306014 IGF2RP11717 2491 aa10.62□□□□□ -0.71
DDX54-201ENST00000306014 ATRXP46100 2492 aa10.62□□□□□ -0.71
DDX54-201ENST00000306014 TGFAP01135 160 aa10.62□□□□□ -0.71
DDX54-201ENST00000306014 FAM106AQ4KMX7 169 aa10.62□□□□□ -0.71
DDX54-201ENST00000306014 ZC2HC1BQ5TFG8 222 aa10.62□□□□□ -0.71
DDX54-201ENST00000306014 THAP8Q8NA92 274 aa10.62□□□□□ -0.71
DDX54-201ENST00000306014 SYT8Q8NBV8 401 aa10.62□□□□□ -0.71
DDX54-201ENST00000306014 DAZAP2Q15038 168 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms