RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 SLC17A3O00476 420 aa20.32■□□□□ 0.84
HDAC3-201ENST00000305264 CXorf1O96002 111 aa20.32■□□□□ 0.84
HDAC3-201ENST00000305264 HIST1H1EP10412 219 aaKnown RBP20.32■□□□□ 0.84
HDAC3-201ENST00000305264 PAFAH1B2P68402 229 aa20.32■□□□□ 0.84
HDAC3-201ENST00000305264 FAM24BQ8N5W8 94 aa20.32■□□□□ 0.84
HDAC3-201ENST00000305264 SFT2D1Q8WV19 159 aa20.32■□□□□ 0.84
HDAC3-201ENST00000305264 BLNKQ8WV28 456 aa20.32■□□□□ 0.84
HDAC3-201ENST00000305264 DNAH3Q8TD57 4116 aa20.31■□□□□ 0.84
HDAC3-201ENST00000305264 A0A1B0GV50 99 aa20.31■□□□□ 0.84
HDAC3-201ENST00000305264 SOCS3O14543 225 aa20.31■□□□□ 0.84
HDAC3-201ENST00000305264 H2AFB1P0C5Y9 115 aa20.31■□□□□ 0.84
HDAC3-201ENST00000305264 MBD3L1Q8WWY6 194 aa20.31■□□□□ 0.84
HDAC3-201ENST00000305264 K7EQG2 157 aa20.3■□□□□ 0.84
HDAC3-201ENST00000305264 GCHFRP30047 84 aa20.3■□□□□ 0.84
HDAC3-201ENST00000305264 KRTAP10-11P60412 298 aa20.3■□□□□ 0.84
HDAC3-201ENST00000305264 EGFEM1PQ0D2K5 195 aa20.3■□□□□ 0.84
HDAC3-201ENST00000305264 TMPRSS5Q9H3S3 457 aa20.3■□□□□ 0.84
HDAC3-201ENST00000305264 IQCF2Q8IXL9 164 aa20.3■□□□□ 0.84
HDAC3-201ENST00000305264 TRBV19A0A075B6N1 114 aa20.29■□□□□ 0.84
HDAC3-201ENST00000305264 OR4C46A6NHA9 309 aa20.29■□□□□ 0.84
HDAC3-201ENST00000305264 IFNA7P01567 189 aa20.29■□□□□ 0.84
HDAC3-201ENST00000305264 NBEAP1P0C6P0 100 aa20.29■□□□□ 0.84
HDAC3-201ENST00000305264 MEOX2P50222 304 aa20.28■□□□□ 0.84
HDAC3-201ENST00000305264 IFITM2Q01629 132 aa20.28■□□□□ 0.84
HDAC3-201ENST00000305264 BEAN1Q3B7T3 259 aa20.28■□□□□ 0.84
HDAC3-201ENST00000305264 IGFL4Q6B9Z1 124 aa20.28■□□□□ 0.84
HDAC3-201ENST00000305264 SAT2Q96F10 170 aaPredicted RBP20.28■□□□□ 0.84
HDAC3-201ENST00000305264 TRAV2A0A0B4J234 112 aa20.28■□□□□ 0.84
HDAC3-201ENST00000305264 NDUFB4O95168 129 aa20.27■□□□□ 0.84
HDAC3-201ENST00000305264 GUK1Q16774 197 aa20.27■□□□□ 0.84
HDAC3-201ENST00000305264 C16orf92Q96LL3 132 aa20.27■□□□□ 0.84
HDAC3-201ENST00000305264 UBQLN2Q9UHD9 624 aa20.27■□□□□ 0.84
HDAC3-201ENST00000305264 TRAV8-2A0A0B4J237 113 aa20.26■□□□□ 0.83
HDAC3-201ENST00000305264 LRRC20Q8TCA0 184 aa20.26■□□□□ 0.83
HDAC3-201ENST00000305264 PCNPQ8WW12 178 aaKnown RBP20.26■□□□□ 0.83
HDAC3-201ENST00000305264 ZNF331Q9NQX6 463 aaPredicted RBP20.26■□□□□ 0.83
HDAC3-201ENST00000305264 CD7P09564 240 aa20.25■□□□□ 0.83
HDAC3-201ENST00000305264 ZNF688P0C7X2 276 aa20.25■□□□□ 0.83
HDAC3-201ENST00000305264 RNF182Q8N6D2 247 aa20.25■□□□□ 0.83
HDAC3-201ENST00000305264 SUN5Q8TC36 379 aa20.25■□□□□ 0.83
HDAC3-201ENST00000305264 HLA-DMBP28068 263 aa20.25■□□□□ 0.83
HDAC3-201ENST00000305264 PDE6HQ13956 83 aa20.25■□□□□ 0.83
HDAC3-201ENST00000305264 PRR25Q96S07 402 aa20.25■□□□□ 0.83
HDAC3-201ENST00000305264 ISLRO14498 428 aa20.24■□□□□ 0.83
HDAC3-201ENST00000305264 TMEM167BQ9NRX6 74 aa20.24■□□□□ 0.83
HDAC3-201ENST00000305264 TRAV1-1A0A0B4J248 108 aa20.23■□□□□ 0.83
HDAC3-201ENST00000305264 ZNF253O75346 499 aa20.23■□□□□ 0.83
HDAC3-201ENST00000305264 PSMB3P49720 205 aa20.23■□□□□ 0.83
HDAC3-201ENST00000305264 CCL20P78556 96 aa20.23■□□□□ 0.83
HDAC3-201ENST00000305264 ODF3L2Q3SX64 289 aa20.23■□□□□ 0.83
HDAC3-201ENST00000305264 C20orf173Q96LM9 149 aa20.23■□□□□ 0.83
HDAC3-201ENST00000305264 SLC50A1Q9BRV3 221 aa20.23■□□□□ 0.83
HDAC3-201ENST00000305264 CD81P60033 236 aa20.23■□□□□ 0.83
HDAC3-201ENST00000305264 BLOC1S1P78537 153 aa20.23■□□□□ 0.83
HDAC3-201ENST00000305264 SAMD13Q5VXD3 122 aa20.23■□□□□ 0.83
HDAC3-201ENST00000305264 RANP62826 216 aaKnown RBP20.22■□□□□ 0.83
HDAC3-201ENST00000305264 EXOC3-AS1Q8N2X6 119 aa20.22■□□□□ 0.83
HDAC3-201ENST00000305264 MAP6D1Q9H9H5 199 aa20.22■□□□□ 0.83
HDAC3-201ENST00000305264 SNRPD3P62318 126 aaKnown RBP20.21■□□□□ 0.83
HDAC3-201ENST00000305264 PSMG4Q5JS54 123 aa20.21■□□□□ 0.83
HDAC3-201ENST00000305264 KPRPQ5T749 579 aaPredicted RBP20.21■□□□□ 0.83
HDAC3-201ENST00000305264 LINC00052Q96N35 136 aa20.21■□□□□ 0.83
HDAC3-201ENST00000305264 ID1P41134 155 aa20.21■□□□□ 0.83
HDAC3-201ENST00000305264 WFDC10AQ9H1F0 79 aa20.21■□□□□ 0.83
HDAC3-201ENST00000305264 HBE1P02100 147 aa20.2■□□□□ 0.82
HDAC3-201ENST00000305264 PRB4P10163 310 aaPredicted RBP20.2■□□□□ 0.82
HDAC3-201ENST00000305264 UBE2G2P60604 165 aa20.2■□□□□ 0.82
HDAC3-201ENST00000305264 GTSCR1Q86UQ5 136 aa20.2■□□□□ 0.82
HDAC3-201ENST00000305264 Q9H3A6 140 aa20.2■□□□□ 0.82
HDAC3-201ENST00000305264 DEFB131AP59861 70 aa20.19■□□□□ 0.82
HDAC3-201ENST00000305264 PSG9Q00887 426 aa20.19■□□□□ 0.82
HDAC3-201ENST00000305264 C19orf73Q9NVV2 129 aa20.19■□□□□ 0.82
HDAC3-201ENST00000305264 ZMAT5Q9UDW3 170 aaKnown RBP20.19■□□□□ 0.82
HDAC3-201ENST00000305264 YTHDF2Q9Y5A9 579 aaKnown RBP20.19■□□□□ 0.82
HDAC3-201ENST00000305264 TEX46H3BTG2 121 aa20.18■□□□□ 0.82
HDAC3-201ENST00000305264 NMBP08949 121 aa20.18■□□□□ 0.82
HDAC3-201ENST00000305264 DEFB1P60022 68 aa20.18■□□□□ 0.82
HDAC3-201ENST00000305264 ICAM4Q14773 271 aa20.18■□□□□ 0.82
HDAC3-201ENST00000305264 ZNF124Q15973 351 aa20.18■□□□□ 0.82
HDAC3-201ENST00000305264 ZNF767PQ75MW2 155 aa20.18■□□□□ 0.82
HDAC3-201ENST00000305264 M0R3E3 92 aa20.17■□□□□ 0.82
HDAC3-201ENST00000305264 APRG1Q8IVJ8 170 aa20.17■□□□□ 0.82
HDAC3-201ENST00000305264 LYPD6BQ8NI32 183 aa20.17■□□□□ 0.82
HDAC3-201ENST00000305264 OR11H12B2RN74 326 aa20.17■□□□□ 0.82
HDAC3-201ENST00000305264 AAMDCQ9H7C9 122 aa20.17■□□□□ 0.82
HDAC3-201ENST00000305264 ZNF705FA8MVS1 300 aaPredicted RBP20.16■□□□□ 0.82
HDAC3-201ENST00000305264 GGTLC3B5MD39 225 aa20.16■□□□□ 0.82
HDAC3-201ENST00000305264 PSG3Q16557 428 aa20.16■□□□□ 0.82
HDAC3-201ENST00000305264 Q8N1Y9 231 aa20.16■□□□□ 0.82
HDAC3-201ENST00000305264 LYPD1Q8N2G4 141 aa20.16■□□□□ 0.82
HDAC3-201ENST00000305264 FAM74A7A6NL05 159 aa20.15■□□□□ 0.82
HDAC3-201ENST00000305264 PRB2P02812 416 aaPredicted RBP20.15■□□□□ 0.82
HDAC3-201ENST00000305264 GNG13Q9P2W3 67 aa20.15■□□□□ 0.82
HDAC3-201ENST00000305264 ZNF738Q8NE65 137 aa20.15■□□□□ 0.82
HDAC3-201ENST00000305264 FAM110AQ9BQ89 295 aa20.15■□□□□ 0.82
HDAC3-201ENST00000305264 OTORQ9NRC9 128 aa20.15■□□□□ 0.82
HDAC3-201ENST00000305264 A0A1W2PRE2 83 aa20.14■□□□□ 0.81
HDAC3-201ENST00000305264 PGPA6NDG6 321 aa20.14■□□□□ 0.81
HDAC3-201ENST00000305264 PAGE4O60829 102 aa20.14■□□□□ 0.81
HDAC3-201ENST00000305264 AGRNO00468 2067 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms