RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 ISLRO14498 428 aa11.26□□□□□ -0.61
SHCBP1-201ENST00000303383 CSN1S1P47710 185 aa11.26□□□□□ -0.61
SHCBP1-201ENST00000303383 C19orf54Q5BKX5 351 aa11.26□□□□□ -0.61
SHCBP1-201ENST00000303383 PRR27Q6MZM9 219 aa11.26□□□□□ -0.61
SHCBP1-201ENST00000303383 C9orf139Q6ZV77 190 aa11.26□□□□□ -0.61
SHCBP1-201ENST00000303383 IL17RELQ6ZVW7 336 aa11.26□□□□□ -0.61
SHCBP1-201ENST00000303383 ZNF207O43670 478 aaKnown RBP11.25□□□□□ -0.61
SHCBP1-201ENST00000303383 TCRAP04437 139 aa11.25□□□□□ -0.61
SHCBP1-201ENST00000303383 PPIFP30405 207 aaKnown RBP11.25□□□□□ -0.61
SHCBP1-201ENST00000303383 FAM3BP58499 235 aaPredicted RBP11.25□□□□□ -0.61
SHCBP1-201ENST00000303383 C17orf77Q96MU5 243 aa11.25□□□□□ -0.61
SHCBP1-201ENST00000303383 YPEL4Q96NS1 127 aa11.25□□□□□ -0.61
SHCBP1-201ENST00000303383 FSHBP01225 129 aa11.25□□□□□ -0.61
SHCBP1-201ENST00000303383 MYCNOSP40205 109 aa11.25□□□□□ -0.61
SHCBP1-201ENST00000303383 GOLT1AQ6ZVE7 132 aa11.25□□□□□ -0.61
SHCBP1-201ENST00000303383 BTF3L4Q96K17 158 aa11.25□□□□□ -0.61
SHCBP1-201ENST00000303383 TRBV24-1A0A075B6N3 115 aa11.25□□□□□ -0.61
SHCBP1-201ENST00000303383 IGHV3OR16-13A0A075B7E8 117 aa11.25□□□□□ -0.61
SHCBP1-201ENST00000303383 IGHV3-74A0A0B4J1X5 117 aa11.25□□□□□ -0.61
SHCBP1-201ENST00000303383 PFN1P07737 140 aaKnown RBP11.25□□□□□ -0.61
SHCBP1-201ENST00000303383 LYPD1Q8N2G4 141 aa11.25□□□□□ -0.61
SHCBP1-201ENST00000303383 ATP6V0BQ99437 205 aa11.25□□□□□ -0.61
SHCBP1-201ENST00000303383 IGHV3-66A0A0C4DH42 116 aa11.24□□□□□ -0.61
SHCBP1-201ENST00000303383 IGLC2P0DOY2 106 aa11.24□□□□□ -0.61
SHCBP1-201ENST00000303383 PSG9Q00887 426 aa11.24□□□□□ -0.61
SHCBP1-201ENST00000303383 TMEM183BQ1AE95 376 aa11.24□□□□□ -0.61
SHCBP1-201ENST00000303383 IBA57Q5T440 356 aaKnown RBP11.24□□□□□ -0.61
SHCBP1-201ENST00000303383 LCNL1Q6ZST4 164 aa11.24□□□□□ -0.61
SHCBP1-201ENST00000303383 FMC1Q96HJ9 113 aa11.24□□□□□ -0.61
SHCBP1-201ENST00000303383 DUX5Q96PT3 197 aa11.24□□□□□ -0.61
SHCBP1-201ENST00000303383 KLK15Q9H2R5 256 aa11.24□□□□□ -0.61
SHCBP1-201ENST00000303383 SLC17A3O00476 420 aa11.24□□□□□ -0.61
SHCBP1-201ENST00000303383 ZNF414Q96IQ9 312 aa11.24□□□□□ -0.61
SHCBP1-201ENST00000303383 SONP18583 2426 aaKnown RBP11.24□□□□□ -0.61
SHCBP1-201ENST00000303383 ITPR3Q14573 2671 aa11.24□□□□□ -0.61
SHCBP1-201ENST00000303383 IGHV3-49A0A0A0MS15 119 aa11.23□□□□□ -0.61
SHCBP1-201ENST00000303383 SLC35B1P78383 322 aa11.23□□□□□ -0.61
SHCBP1-201ENST00000303383 PDE6HQ13956 83 aa11.23□□□□□ -0.61
SHCBP1-201ENST00000303383 OR4X2Q8NGF9 303 aa11.23□□□□□ -0.61
SHCBP1-201ENST00000303383 IGF2BP2-AS1Q96M15 143 aa11.23□□□□□ -0.61
SHCBP1-201ENST00000303383 RNASE7Q9H1E1 156 aaKnown RBP11.23□□□□□ -0.61
SHCBP1-201ENST00000303383 TEX15Q9BXT5 2789 aa11.23□□□□□ -0.61
SHCBP1-201ENST00000303383 ZNF320A2RRD8 509 aa11.23□□□□□ -0.61
SHCBP1-201ENST00000303383 J3KRW8 73 aa11.23□□□□□ -0.61
SHCBP1-201ENST00000303383 ZFAND3Q9H8U3 227 aa11.23□□□□□ -0.61
SHCBP1-201ENST00000303383 ZNF705GA8MUZ8 300 aaPredicted RBP11.23□□□□□ -0.61
SHCBP1-201ENST00000303383 RPL19P84098 196 aaKnown RBP11.23□□□□□ -0.61
SHCBP1-201ENST00000303383 RPEL1Q2QD12 228 aa11.23□□□□□ -0.61
SHCBP1-201ENST00000303383 GPR82Q96P67 336 aa11.23□□□□□ -0.61
SHCBP1-201ENST00000303383 GCGP01275 180 aa11.22□□□□□ -0.61
SHCBP1-201ENST00000303383 SIGLECL1Q8N7X8 197 aa11.22□□□□□ -0.61
SHCBP1-201ENST00000303383 TMEM190Q8WZ59 177 aa11.22□□□□□ -0.61
SHCBP1-201ENST00000303383 FOXC2Q99958 501 aa11.22□□□□□ -0.61
SHCBP1-201ENST00000303383 PRNTQ86SH4 94 aa11.22□□□□□ -0.61
SHCBP1-201ENST00000303383 IMMP2LQ96T52 175 aa11.22□□□□□ -0.61
SHCBP1-201ENST00000303383 YAE1D1Q9NRH1 226 aa11.22□□□□□ -0.61
SHCBP1-201ENST00000303383 FASNP49327 2511 aaKnown RBP11.22□□□□□ -0.61
SHCBP1-201ENST00000303383 TRGC2P03986 189 aa11.22□□□□□ -0.61
SHCBP1-201ENST00000303383 ODF1Q14990 250 aa11.22□□□□□ -0.61
SHCBP1-201ENST00000303383 SIGLEC15Q6ZMC9 328 aa11.22□□□□□ -0.61
SHCBP1-201ENST00000303383 DAZAP1Q96EP5 407 aaKnown RBP11.22□□□□□ -0.61
SHCBP1-201ENST00000303383 OSTCQ9NRP0 149 aa11.22□□□□□ -0.61
SHCBP1-201ENST00000303383 IL36BQ9NZH7 164 aa11.21□□□□□ -0.61
SHCBP1-201ENST00000303383 FLNAP21333 2647 aaKnown RBP11.21□□□□□ -0.61
SHCBP1-201ENST00000303383 C1QL4Q86Z23 238 aa11.21□□□□□ -0.62
SHCBP1-201ENST00000303383 C2orf88Q9BSF0 95 aa11.21□□□□□ -0.62
SHCBP1-201ENST00000303383 MRPS12O15235 138 aaKnown RBP11.21□□□□□ -0.62
SHCBP1-201ENST00000303383 BRI3O95415 125 aa11.21□□□□□ -0.62
SHCBP1-201ENST00000303383 IGLV1-40P01703 118 aa11.21□□□□□ -0.62
SHCBP1-201ENST00000303383 FOXL1Q12952 345 aa11.21□□□□□ -0.62
SHCBP1-201ENST00000303383 TRAV8-1A0A0A6YYK1 113 aa11.2□□□□□ -0.62
SHCBP1-201ENST00000303383 M0R3E3 92 aa11.2□□□□□ -0.62
SHCBP1-201ENST00000303383 BUB3O43684 328 aa11.2□□□□□ -0.62
SHCBP1-201ENST00000303383 GGCTO75223 188 aaKnown RBP11.2□□□□□ -0.62
SHCBP1-201ENST00000303383 TRBV12-3P01733 135 aa11.2□□□□□ -0.62
SHCBP1-201ENST00000303383 SRD5A3Q9H8P0 318 aa11.2□□□□□ -0.62
SHCBP1-201ENST00000303383 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.2□□□□□ -0.62
SHCBP1-201ENST00000303383 IGLV2-8P01709 118 aa11.2□□□□□ -0.62
SHCBP1-201ENST00000303383 PRB4P10163 310 aaPredicted RBP11.2□□□□□ -0.62
SHCBP1-201ENST00000303383 KLF12Q9Y4X4 402 aa11.2□□□□□ -0.62
SHCBP1-201ENST00000303383 NDUFA4O00483 81 aa11.19□□□□□ -0.62
SHCBP1-201ENST00000303383 REC114Q7Z4M0 266 aa11.19□□□□□ -0.62
SHCBP1-201ENST00000303383 GRAMD2BQ96HH9 432 aa11.19□□□□□ -0.62
SHCBP1-201ENST00000303383 NOTCH2Q04721 2471 aa11.19□□□□□ -0.62
SHCBP1-201ENST00000303383 IGHG4P01861 327 aa11.19□□□□□ -0.62
SHCBP1-201ENST00000303383 TCL1AP56279 114 aa11.19□□□□□ -0.62
SHCBP1-201ENST00000303383 SNRPEP62304 92 aaKnown RBP11.19□□□□□ -0.62
SHCBP1-201ENST00000303383 C1orf194Q5T5A4 169 aa11.19□□□□□ -0.62
SHCBP1-201ENST00000303383 SMIM12Q96EX1 92 aa11.19□□□□□ -0.62
SHCBP1-201ENST00000303383 PEF1Q9UBV8 284 aaKnown RBP11.19□□□□□ -0.62
SHCBP1-201ENST00000303383 ZNF580Q9UK33 172 aa11.19□□□□□ -0.62
SHCBP1-201ENST00000303383 V9GYV3 84 aa11.19□□□□□ -0.62
SHCBP1-201ENST00000303383 UNC79Q9P2D8 2635 aa11.19□□□□□ -0.62
SHCBP1-201ENST00000303383 FRZBQ92765 325 aa11.18□□□□□ -0.62
SHCBP1-201ENST00000303383 NUTF2P61970 127 aaKnown RBP11.18□□□□□ -0.62
SHCBP1-201ENST00000303383 RPL11P62913 178 aaKnown RBP11.18□□□□□ -0.62
SHCBP1-201ENST00000303383 Q86TA4 180 aa11.18□□□□□ -0.62
SHCBP1-201ENST00000303383 PYGO2Q9BRQ0 406 aa11.18□□□□□ -0.62
SHCBP1-201ENST00000303383 HECTD1Q9ULT8 2610 aa11.18□□□□□ -0.62
SHCBP1-201ENST00000303383 A0A1W2PS18 150 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms