RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 A0A0G2JMZ2 1700 aa8.47□□□□□ -1.05
CLIP1-201ENST00000302528 LRRC37A2A6NM11 1700 aa8.47□□□□□ -1.05
CLIP1-201ENST00000302528 FGF16O43320 207 aa8.46□□□□□ -1.05
CLIP1-201ENST00000302528 SLC25A16P16260 332 aa8.46□□□□□ -1.05
CLIP1-201ENST00000302528 FBLN5Q9UBX5 448 aa8.46□□□□□ -1.05
CLIP1-201ENST00000302528 I3L3M4 83 aa8.46□□□□□ -1.05
CLIP1-201ENST00000302528 PRB1P04280 392 aa8.46□□□□□ -1.06
CLIP1-201ENST00000302528 AZU1P20160 251 aa8.46□□□□□ -1.06
CLIP1-201ENST00000302528 TMEM243Q9BU79 118 aa8.46□□□□□ -1.06
CLIP1-201ENST00000302528 IGKV1-9A0A0C4DH69 117 aa8.46□□□□□ -1.06
CLIP1-201ENST00000302528 TEX48A0A1B0GUV7 120 aa8.46□□□□□ -1.06
CLIP1-201ENST00000302528 FOXF2Q12947 444 aa8.46□□□□□ -1.06
CLIP1-201ENST00000302528 LY6G6FQ5SQ64 297 aa8.46□□□□□ -1.06
CLIP1-201ENST00000302528 CRYGCP07315 174 aa8.45□□□□□ -1.06
CLIP1-201ENST00000302528 SLAQ13239 276 aa8.45□□□□□ -1.06
CLIP1-201ENST00000302528 GLRX5Q86SX6 157 aa8.45□□□□□ -1.06
CLIP1-201ENST00000302528 GAGE7O76087 117 aa8.45□□□□□ -1.06
CLIP1-201ENST00000302528 GAGE12FP0CL80 117 aa8.45□□□□□ -1.06
CLIP1-201ENST00000302528 GAGE12GP0CL81 117 aa8.45□□□□□ -1.06
CLIP1-201ENST00000302528 GAGE12IP0CL82 117 aa8.45□□□□□ -1.06
CLIP1-201ENST00000302528 FGF6P10767 208 aa8.45□□□□□ -1.06
CLIP1-201ENST00000302528 SCN8AQ9UQD0 1980 aa8.45□□□□□ -1.06
CLIP1-201ENST00000302528 PDCD11Q14690 1871 aaKnown RBP8.45□□□□□ -1.06
CLIP1-201ENST00000302528 SRRM5B3KS81 715 aa8.45□□□□□ -1.06
CLIP1-201ENST00000302528 M0R1W7 72 aa8.45□□□□□ -1.06
CLIP1-201ENST00000302528 C2orf66Q6UXQ4 117 aa8.45□□□□□ -1.06
CLIP1-201ENST00000302528 DEFB105AQ8NG35 78 aa8.45□□□□□ -1.06
CLIP1-201ENST00000302528 SPRR3Q9UBC9 169 aa8.45□□□□□ -1.06
CLIP1-201ENST00000302528 LY96Q9Y6Y9 160 aa8.45□□□□□ -1.06
CLIP1-201ENST00000302528 TMEM178BH3BS89 294 aa8.45□□□□□ -1.06
CLIP1-201ENST00000302528 TGFBR3LH3BV60 316 aa8.45□□□□□ -1.06
CLIP1-201ENST00000302528 PAX9P55771 341 aa8.45□□□□□ -1.06
CLIP1-201ENST00000302528 TRAV3A0A0B4J244 114 aa8.44□□□□□ -1.06
CLIP1-201ENST00000302528 E9PQ18 207 aa8.44□□□□□ -1.06
CLIP1-201ENST00000302528 PRB2P02812 416 aaPredicted RBP8.44□□□□□ -1.06
CLIP1-201ENST00000302528 BAALCQ8WXS3 180 aa8.44□□□□□ -1.06
CLIP1-201ENST00000302528 TSSC4Q9Y5U2 329 aaPredicted RBP8.44□□□□□ -1.06
CLIP1-201ENST00000302528 ZNF638Q14966 1978 aaKnown RBP8.44□□□□□ -1.06
CLIP1-201ENST00000302528 FAM231BA6NCW3 169 aa8.44□□□□□ -1.06
CLIP1-201ENST00000302528 H0YJW9 148 aa8.44□□□□□ -1.06
CLIP1-201ENST00000302528 SPINK13Q1W4C9 94 aa8.44□□□□□ -1.06
CLIP1-201ENST00000302528 Q86TA4 180 aa8.44□□□□□ -1.06
CLIP1-201ENST00000302528 SPACA3Q8IXA5 215 aa8.44□□□□□ -1.06
CLIP1-201ENST00000302528 BUB1B-PAK6H3BSN5 160 aa8.44□□□□□ -1.06
CLIP1-201ENST00000302528 IL17RELQ6ZVW7 336 aa8.44□□□□□ -1.06
CLIP1-201ENST00000302528 LINC01356Q8N9X3 169 aa8.44□□□□□ -1.06
CLIP1-201ENST00000302528 ZNRF2Q8NHG8 242 aa8.44□□□□□ -1.06
CLIP1-201ENST00000302528 KLK9Q9UKQ9 250 aa8.44□□□□□ -1.06
CLIP1-201ENST00000302528 TRAV13-2A0A0B4J235 113 aa8.44□□□□□ -1.06
CLIP1-201ENST00000302528 GAS1P54826 345 aa8.44□□□□□ -1.06
CLIP1-201ENST00000302528 CARD19Q96LW7 228 aa8.44□□□□□ -1.06
CLIP1-201ENST00000302528 IGKV1D-8A0A087WSZ0 117 aa8.44□□□□□ -1.06
CLIP1-201ENST00000302528 WFDC9Q8NEX5 89 aa8.44□□□□□ -1.06
CLIP1-201ENST00000302528 PIKFYVEQ9Y2I7 2098 aa8.44□□□□□ -1.06
CLIP1-201ENST00000302528 TRAV1-1A0A0B4J248 108 aa8.43□□□□□ -1.06
CLIP1-201ENST00000302528 IGHV3-38A0A0C4DH36 116 aa8.43□□□□□ -1.06
CLIP1-201ENST00000302528 EPOPA6NHQ4 379 aa8.43□□□□□ -1.06
CLIP1-201ENST00000302528 COLCA2A8K830 154 aa8.43□□□□□ -1.06
CLIP1-201ENST00000302528 CRYBA4P53673 196 aa8.43□□□□□ -1.06
CLIP1-201ENST00000302528 MRPL14Q6P1L8 145 aaKnown RBP8.43□□□□□ -1.06
CLIP1-201ENST00000302528 SVIPQ8NHG7 77 aa8.43□□□□□ -1.06
CLIP1-201ENST00000302528 CFHR2P36980 270 aa8.43□□□□□ -1.06
CLIP1-201ENST00000302528 APOC4P55056 127 aa8.43□□□□□ -1.06
CLIP1-201ENST00000302528 NDUFA12Q9UI09 145 aa8.43□□□□□ -1.06
CLIP1-201ENST00000302528 SEC16AO15027 2179 aa8.43□□□□□ -1.06
CLIP1-201ENST00000302528 INTS1Q8N201 2190 aaKnown RBP8.43□□□□□ -1.06
CLIP1-201ENST00000302528 NYNRINQ9P2P1 1898 aaKnown RBP8.43□□□□□ -1.06
CLIP1-201ENST00000302528 SPTBN1Q01082 2364 aaKnown RBP8.43□□□□□ -1.06
CLIP1-201ENST00000302528 GNLYP22749 145 aa8.43□□□□□ -1.06
CLIP1-201ENST00000302528 RPP25LQ8N5L8 163 aaKnown RBP8.43□□□□□ -1.06
CLIP1-201ENST00000302528 SIGLEC9Q9Y336 463 aa8.43□□□□□ -1.06
CLIP1-201ENST00000302528 DICER1Q9UPY3 1922 aaKnown RBP8.43□□□□□ -1.06
CLIP1-201ENST00000302528 RS1O15537 224 aa8.43□□□□□ -1.06
CLIP1-201ENST00000302528 ANGP03950 147 aaKnown RBP8.43□□□□□ -1.06
CLIP1-201ENST00000302528 HGFACQ04756 655 aa8.43□□□□□ -1.06
CLIP1-201ENST00000302528 BRCA1P38398 1863 aaKnown RBP8.43□□□□□ -1.06
CLIP1-201ENST00000302528 LINC01619G3V211 115 aa8.42□□□□□ -1.06
CLIP1-201ENST00000302528 HLA-DRB4P13762 266 aa8.42□□□□□ -1.06
CLIP1-201ENST00000302528 ANKRD29Q8N6D5 301 aa8.42□□□□□ -1.06
CLIP1-201ENST00000302528 HLA-DRB4X5D2U9 266 aa8.42□□□□□ -1.06
CLIP1-201ENST00000302528 WDR81Q562E7 1941 aa8.42□□□□□ -1.06
CLIP1-201ENST00000302528 FAM186AA6NE01 2351 aa8.42□□□□□ -1.06
CLIP1-201ENST00000302528 LINC00114Q6XXX2 140 aa8.42□□□□□ -1.06
CLIP1-201ENST00000302528 C1orf43Q9BWL3 253 aa8.42□□□□□ -1.06
CLIP1-201ENST00000302528 GFRA4Q9GZZ7 299 aa8.42□□□□□ -1.06
CLIP1-201ENST00000302528 A0A0A6YYD4 124 aa8.42□□□□□ -1.06
CLIP1-201ENST00000302528 CKAP5Q14008 2032 aa8.42□□□□□ -1.06
CLIP1-201ENST00000302528 DOCK3Q8IZD9 2030 aa8.42□□□□□ -1.06
CLIP1-201ENST00000302528 A0A096LPF7 62 aa8.42□□□□□ -1.06
CLIP1-201ENST00000302528 A0A1B0GW64 132 aa8.41□□□□□ -1.06
CLIP1-201ENST00000302528 RNASE2P10153 161 aaKnown RBP8.41□□□□□ -1.06
CLIP1-201ENST00000302528 CSRP1P21291 193 aaKnown RBP8.41□□□□□ -1.06
CLIP1-201ENST00000302528 MST1LQ2TV78 715 aa8.41□□□□□ -1.06
CLIP1-201ENST00000302528 CD177Q8N6Q3 437 aa8.41□□□□□ -1.06
CLIP1-201ENST00000302528 DKK4Q9UBT3 224 aa8.41□□□□□ -1.06
CLIP1-201ENST00000302528 TMEM213A2RRL7 107 aa8.41□□□□□ -1.06
CLIP1-201ENST00000302528 SHISA9B4DS77 424 aa8.41□□□□□ -1.06
CLIP1-201ENST00000302528 NTF4P34130 210 aa8.41□□□□□ -1.06
CLIP1-201ENST00000302528 BTCP35070 178 aa8.41□□□□□ -1.06
CLIP1-201ENST00000302528 FGFBP3Q8TAT2 258 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms