RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 TAL2Q16559 108 aa6.26□□□□□ -1.41
SF3B3-201ENST00000302516 VGLL1Q99990 258 aa6.26□□□□□ -1.41
SF3B3-201ENST00000302516 A0A087WV48 116 aa6.26□□□□□ -1.41
SF3B3-201ENST00000302516 IGKV1-12A0A0C4DH73 117 aa6.26□□□□□ -1.41
SF3B3-201ENST00000302516 C15orf62A8K5M9 175 aa6.26□□□□□ -1.41
SF3B3-201ENST00000302516 IGKV1D-12P01611 117 aa6.26□□□□□ -1.41
SF3B3-201ENST00000302516 FAM27E3Q08E93 113 aa6.26□□□□□ -1.41
SF3B3-201ENST00000302516 LINC01545Q5VT33 79 aa6.26□□□□□ -1.41
SF3B3-201ENST00000302516 CSTL1Q9H114 145 aa6.26□□□□□ -1.41
SF3B3-201ENST00000302516 TMEM14BQ9NUH8 114 aa6.26□□□□□ -1.41
SF3B3-201ENST00000302516 POLR3KQ9Y2Y1 108 aaPredicted RBP6.26□□□□□ -1.41
SF3B3-201ENST00000302516 K7EP34 96 aa6.25□□□□□ -1.41
SF3B3-201ENST00000302516 SIVA1O15304 175 aa6.25□□□□□ -1.41
SF3B3-201ENST00000302516 Q6P435 159 aa6.25□□□□□ -1.41
SF3B3-201ENST00000302516 FAM231DQ6ZW35 169 aa6.25□□□□□ -1.41
SF3B3-201ENST00000302516 LY6G5BQ8NDX9 201 aa6.25□□□□□ -1.41
SF3B3-201ENST00000302516 TRPT1Q86TN4 253 aaKnown RBP6.25□□□□□ -1.41
SF3B3-201ENST00000302516 GTSF1LQ9H1H1 148 aa6.25□□□□□ -1.41
SF3B3-201ENST00000302516 SMIM27A0A1W2PRY6 76 aa6.25□□□□□ -1.41
SF3B3-201ENST00000302516 TMEM158Q8WZ71 300 aa6.25□□□□□ -1.41
SF3B3-201ENST00000302516 RCHY1Q96PM5 261 aa6.25□□□□□ -1.41
SF3B3-201ENST00000302516 C5orf64Q2M2E5 130 aa6.25□□□□□ -1.41
SF3B3-201ENST00000302516 LAMTOR3Q9UHA4 124 aa6.25□□□□□ -1.41
SF3B3-201ENST00000302516 E9PLN8 166 aa6.25□□□□□ -1.41
SF3B3-201ENST00000302516 HAX1O00165 279 aa6.25□□□□□ -1.41
SF3B3-201ENST00000302516 FOXL2NBQ6ZUU3 175 aa6.25□□□□□ -1.41
SF3B3-201ENST00000302516 CHCHD5Q9BSY4 110 aa6.25□□□□□ -1.41
SF3B3-201ENST00000302516 SCRT1Q9BWW7 348 aa6.25□□□□□ -1.41
SF3B3-201ENST00000302516 PLSCR4Q9NRQ2 329 aa6.25□□□□□ -1.41
SF3B3-201ENST00000302516 LCN12Q6JVE5 192 aa6.25□□□□□ -1.41
SF3B3-201ENST00000302516 SFTA2Q6UW10 78 aa6.25□□□□□ -1.41
SF3B3-201ENST00000302516 KIAA1549Q9HCM3 1950 aa6.25□□□□□ -1.41
SF3B3-201ENST00000302516 ZCCHC24Q8N2G6 241 aaKnown RBP6.25□□□□□ -1.41
SF3B3-201ENST00000302516 SPRR3Q9UBC9 169 aa6.25□□□□□ -1.41
SF3B3-201ENST00000302516 EPOPA6NHQ4 379 aa6.24□□□□□ -1.41
SF3B3-201ENST00000302516 FOXF2Q12947 444 aa6.24□□□□□ -1.41
SF3B3-201ENST00000302516 FAM201AQ5SY85 155 aa6.24□□□□□ -1.41
SF3B3-201ENST00000302516 C20orf204Q6ZNR8 217 aa6.24□□□□□ -1.41
SF3B3-201ENST00000302516 K7EMI3 77 aa6.24□□□□□ -1.41
SF3B3-201ENST00000302516 NCR2O95944 276 aa6.24□□□□□ -1.41
SF3B3-201ENST00000302516 HIST1H4AP62805 103 aaKnown RBP6.24□□□□□ -1.41
SF3B3-201ENST00000302516 ATP1A1-AS1Q5TC04 95 aa6.24□□□□□ -1.41
SF3B3-201ENST00000302516 IL17RELQ6ZVW7 336 aa6.24□□□□□ -1.41
SF3B3-201ENST00000302516 GATD1Q8NB37 220 aa6.24□□□□□ -1.41
SF3B3-201ENST00000302516 EDA2RQ9HAV5 297 aa6.24□□□□□ -1.41
SF3B3-201ENST00000302516 SRRM4A7MD48 611 aaKnown RBP6.24□□□□□ -1.41
SF3B3-201ENST00000302516 TMEM178BH3BS89 294 aa6.24□□□□□ -1.41
SF3B3-201ENST00000302516 PAX4O43316 350 aa6.24□□□□□ -1.41
SF3B3-201ENST00000302516 PRTN3P24158 256 aa6.24□□□□□ -1.41
SF3B3-201ENST00000302516 MST1P26927 711 aa6.24□□□□□ -1.41
SF3B3-201ENST00000302516 MESP1Q9BRJ9 268 aa6.24□□□□□ -1.41
SF3B3-201ENST00000302516 TMEM200BQ69YZ2 307 aa6.24□□□□□ -1.41
SF3B3-201ENST00000302516 TMEM14CQ9P0S9 112 aa6.24□□□□□ -1.41
SF3B3-201ENST00000302516 RHODO00212 210 aa6.24□□□□□ -1.41
SF3B3-201ENST00000302516 CLPSP04118 112 aa6.24□□□□□ -1.41
SF3B3-201ENST00000302516 Q8N8P6 123 aa6.24□□□□□ -1.41
SF3B3-201ENST00000302516 PIEZO1Q92508 2521 aa6.24□□□□□ -1.41
SF3B3-201ENST00000302516 BUB1B-PAK6H3BSN5 160 aa6.24□□□□□ -1.41
SF3B3-201ENST00000302516 RPL15P61313 204 aaKnown RBP6.24□□□□□ -1.41
SF3B3-201ENST00000302516 HGFACQ04756 655 aa6.24□□□□□ -1.41
SF3B3-201ENST00000302516 VMO1Q7Z5L0 202 aa6.24□□□□□ -1.41
SF3B3-201ENST00000302516 C18orf32Q8TCD1 76 aa6.24□□□□□ -1.41
SF3B3-201ENST00000302516 GLMPQ8WWB7 406 aa6.24□□□□□ -1.41
SF3B3-201ENST00000302516 IGHV3OR16-10A0A075B7F0 116 aa6.23□□□□□ -1.41
SF3B3-201ENST00000302516 IFITM1P13164 125 aa6.23□□□□□ -1.41
SF3B3-201ENST00000302516 ZFP36L1Q07352 338 aaKnown RBP6.23□□□□□ -1.41
SF3B3-201ENST00000302516 LHFPL4Q7Z7J7 247 aa6.23□□□□□ -1.41
SF3B3-201ENST00000302516 SRD5A1P18405 259 aa6.23□□□□□ -1.41
SF3B3-201ENST00000302516 IGHG4P01861 327 aa6.23□□□□□ -1.41
SF3B3-201ENST00000302516 NTF4P34130 210 aa6.23□□□□□ -1.41
SF3B3-201ENST00000302516 ZC2HC1BQ5TFG8 222 aa6.23□□□□□ -1.41
SF3B3-201ENST00000302516 GAGE2AQ6NT46 116 aa6.23□□□□□ -1.41
SF3B3-201ENST00000302516 LIME1Q9H400 295 aa6.23□□□□□ -1.41
SF3B3-201ENST00000302516 IGHV3-11P01762 117 aa6.23□□□□□ -1.41
SF3B3-201ENST00000302516 PFN1P07737 140 aaKnown RBP6.23□□□□□ -1.41
SF3B3-201ENST00000302516 COX8AP10176 69 aa6.23□□□□□ -1.41
SF3B3-201ENST00000302516 LSM4Q9Y4Z0 139 aaKnown RBP6.23□□□□□ -1.41
SF3B3-201ENST00000302516 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.23□□□□□ -1.416e-7■■■■■ 31.4
SF3B3-201ENST00000302516 IGKV3D-20A0A0C4DH25 116 aa6.23□□□□□ -1.41
SF3B3-201ENST00000302516 LILRA1O75019 489 aa6.23□□□□□ -1.41
SF3B3-201ENST00000302516 SIGLEC9Q9Y336 463 aa6.23□□□□□ -1.41
SF3B3-201ENST00000302516 COL6A6A6NMZ7 2263 aa6.23□□□□□ -1.41
SF3B3-201ENST00000302516 HOXD3P31249 432 aaPredicted RBP6.23□□□□□ -1.41
SF3B3-201ENST00000302516 C9orf153Q5TBE3 101 aa6.23□□□□□ -1.41
SF3B3-201ENST00000302516 CD177Q8N6Q3 437 aa6.23□□□□□ -1.41
SF3B3-201ENST00000302516 RNASE2P10153 161 aaKnown RBP6.22□□□□□ -1.41
SF3B3-201ENST00000302516 SS18Q15532 418 aa6.22□□□□□ -1.41
SF3B3-201ENST00000302516 C2orf16Q68DN1 1984 aa6.22□□□□□ -1.41
SF3B3-201ENST00000302516 CDKN1AP38936 164 aa6.22□□□□□ -1.41
SF3B3-201ENST00000302516 IGHV2-5P01817 119 aa6.22□□□□□ -1.41
SF3B3-201ENST00000302516 SLC25A16P16260 332 aa6.22□□□□□ -1.41
SF3B3-201ENST00000302516 YPEL3P61236 119 aaPredicted RBP6.22□□□□□ -1.41
SF3B3-201ENST00000302516 IGHV3-64A0A075B6Q5 118 aa6.22□□□□□ -1.41
SF3B3-201ENST00000302516 LINC00473A8K010 186 aa6.22□□□□□ -1.41
SF3B3-201ENST00000302516 SOCS3O14543 225 aa6.22□□□□□ -1.41
SF3B3-201ENST00000302516 MST1LQ2TV78 715 aa6.22□□□□□ -1.41
SF3B3-201ENST00000302516 TANC2Q9HCD6 1990 aa6.22□□□□□ -1.41
SF3B3-201ENST00000302516 IGHV3OR16-8A0A075B7F1 116 aa6.22□□□□□ -1.41
SF3B3-201ENST00000302516 EREGO14944 169 aa6.22□□□□□ -1.41
SF3B3-201ENST00000302516 PMVKQ15126 192 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms