RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 A0A0G2JRQ6 117 aa14.26□□□□□ -0.13
CDC42EP3-201ENST00000295324 SRSF1Q07955 248 aaKnown RBP eCLIP14.26□□□□□ -0.13
CDC42EP3-201ENST00000295324 Q6ZRM9 215 aa14.26□□□□□ -0.13
CDC42EP3-201ENST00000295324 ST6GALNAC6Q969X2 333 aa14.26□□□□□ -0.13
CDC42EP3-201ENST00000295324 C1orf147Q96MC9 270 aaPredicted RBP14.26□□□□□ -0.13
CDC42EP3-201ENST00000295324 IGHV2-70P01814 119 aa14.26□□□□□ -0.13
CDC42EP3-201ENST00000295324 CNTFRP26992 372 aa14.26□□□□□ -0.13
CDC42EP3-201ENST00000295324 YPEL3P61236 119 aaPredicted RBP14.26□□□□□ -0.13
CDC42EP3-201ENST00000295324 CA1P00915 261 aaPredicted RBP14.26□□□□□ -0.13
CDC42EP3-201ENST00000295324 RPL36AP83881 106 aaKnown RBP14.26□□□□□ -0.13
CDC42EP3-201ENST00000295324 ADORA2A-AS1P86434 159 aa14.26□□□□□ -0.13
CDC42EP3-201ENST00000295324 LINC00469Q8N7U9 141 aa14.26□□□□□ -0.13
CDC42EP3-201ENST00000295324 RPL36ALQ969Q0 106 aaKnown RBP14.26□□□□□ -0.13
CDC42EP3-201ENST00000295324 FXYD7P58549 80 aa14.26□□□□□ -0.13
CDC42EP3-201ENST00000295324 PSG3Q16557 428 aa14.26□□□□□ -0.13
CDC42EP3-201ENST00000295324 ORMDL2Q53FV1 153 aa14.26□□□□□ -0.13
CDC42EP3-201ENST00000295324 TMEM14BQ9NUH8 114 aa14.26□□□□□ -0.13
CDC42EP3-201ENST00000295324 A8MXK9 166 aa14.25□□□□□ -0.13
CDC42EP3-201ENST00000295324 SHANK2-AS3Q9BTD1 123 aa14.25□□□□□ -0.13
CDC42EP3-201ENST00000295324 GSN-AS1Q9NRJ2 163 aa14.25□□□□□ -0.13
CDC42EP3-201ENST00000295324 E9PQ18 207 aa14.25□□□□□ -0.13
CDC42EP3-201ENST00000295324 ELANEP08246 267 aa14.25□□□□□ -0.13
CDC42EP3-201ENST00000295324 NDUFA4L2Q9NRX3 87 aa14.25□□□□□ -0.13
CDC42EP3-201ENST00000295324 AMBPP02760 352 aa14.25□□□□□ -0.13
CDC42EP3-201ENST00000295324 MYLKQ15746 1914 aa14.25□□□□□ -0.13
CDC42EP3-201ENST00000295324 LINC01549A6NIU2 74 aa14.24□□□□□ -0.13
CDC42EP3-201ENST00000295324 HOXA3O43365 443 aaPredicted RBP14.24□□□□□ -0.13
CDC42EP3-201ENST00000295324 DAZAP2Q15038 168 aaPredicted RBP14.24□□□□□ -0.13
CDC42EP3-201ENST00000295324 TMEM95Q3KNT9 176 aa14.24□□□□□ -0.13
CDC42EP3-201ENST00000295324 PRDM13Q9H4Q3 707 aa14.24□□□□□ -0.13
CDC42EP3-201ENST00000295324 PDE6HQ13956 83 aa14.24□□□□□ -0.13
CDC42EP3-201ENST00000295324 DERL1Q9BUN8 251 aa14.24□□□□□ -0.13
CDC42EP3-201ENST00000295324 OTOGLQ3ZCN5 2332 aa14.24□□□□□ -0.13
CDC42EP3-201ENST00000295324 PGPEP1Q9NXJ5 209 aa14.24□□□□□ -0.13
CDC42EP3-201ENST00000295324 C22orf46C9J442 243 aa14.24□□□□□ -0.13
CDC42EP3-201ENST00000295324 MLANAQ16655 118 aa14.24□□□□□ -0.13
CDC42EP3-201ENST00000295324 ADARB2-AS1A8MUL3 147 aa14.24□□□□□ -0.13
CDC42EP3-201ENST00000295324 PGPEP1LA6NFU8 196 aa14.23□□□□□ -0.13
CDC42EP3-201ENST00000295324 TYMSP04818 313 aa14.23□□□□□ -0.13
CDC42EP3-201ENST00000295324 PLXND1Q9Y4D7 1925 aa14.23□□□□□ -0.13
CDC42EP3-201ENST00000295324 C15orf65H3BRN8 121 aa14.23□□□□□ -0.13
CDC42EP3-201ENST00000295324 PRB4P10163 310 aaPredicted RBP14.23□□□□□ -0.13
CDC42EP3-201ENST00000295324 APOMO95445 188 aa14.23□□□□□ -0.13
CDC42EP3-201ENST00000295324 ATP5L2Q7Z4Y8 100 aa14.22□□□□□ -0.13
CDC42EP3-201ENST00000295324 LTBP2Q14767 1821 aa14.22□□□□□ -0.13
CDC42EP3-201ENST00000295324 LOC105371267A0A1B0GV96 52 aa14.22□□□□□ -0.13
CDC42EP3-201ENST00000295324 SSBP4Q9BWG4 385 aaPredicted RBP14.22□□□□□ -0.13
CDC42EP3-201ENST00000295324 IGLV3-1P01715 115 aa14.22□□□□□ -0.13
CDC42EP3-201ENST00000295324 SPAG8Q99932 426 aaPredicted RBP14.22□□□□□ -0.13
CDC42EP3-201ENST00000295324 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.22□□□□□ -0.13
CDC42EP3-201ENST00000295324 OR5A1Q8NGJ0 315 aa14.22□□□□□ -0.13
CDC42EP3-201ENST00000295324 VPREB3Q9UKI3 123 aa14.22□□□□□ -0.13
CDC42EP3-201ENST00000295324 RIPPLY3P57055 190 aa14.21□□□□□ -0.13
CDC42EP3-201ENST00000295324 TMEM249Q2WGJ8 235 aa14.21□□□□□ -0.13
CDC42EP3-201ENST00000295324 IGHV4-61A0A0C4DH41 118 aa14.21□□□□□ -0.13
CDC42EP3-201ENST00000295324 TDGF1P3P51864 188 aa14.21□□□□□ -0.13
CDC42EP3-201ENST00000295324 Q8TAT8 98 aa14.21□□□□□ -0.13
CDC42EP3-201ENST00000295324 CD28P10747 220 aa14.21□□□□□ -0.14
CDC42EP3-201ENST00000295324 DEFB112Q30KQ8 113 aa14.21□□□□□ -0.14
CDC42EP3-201ENST00000295324 CYTL1Q9NRR1 136 aa14.21□□□□□ -0.14
CDC42EP3-201ENST00000295324 NDUFA4O00483 81 aa14.2□□□□□ -0.14
CDC42EP3-201ENST00000295324 MMP23AO75900 390 aa14.2□□□□□ -0.14
CDC42EP3-201ENST00000295324 IGHV3-53P01767 116 aa14.2□□□□□ -0.14
CDC42EP3-201ENST00000295324 C11orf68Q9H3H3 251 aaKnown RBP14.2□□□□□ -0.14
CDC42EP3-201ENST00000295324 C1orf194Q5T5A4 169 aa14.2□□□□□ -0.14
CDC42EP3-201ENST00000295324 ARFGEF3Q5TH69 2177 aa14.2□□□□□ -0.14
CDC42EP3-201ENST00000295324 IGFL4Q6B9Z1 124 aa14.2□□□□□ -0.14
CDC42EP3-201ENST00000295324 IGKV3D-20A0A0C4DH25 116 aa14.2□□□□□ -0.14
CDC42EP3-201ENST00000295324 TRBV7-9A0A0J9YWB2 115 aa14.2□□□□□ -0.14
CDC42EP3-201ENST00000295324 HBDP02042 147 aa14.2□□□□□ -0.14
CDC42EP3-201ENST00000295324 IGHV4-30-2A0A087WSY4 118 aa14.19□□□□□ -0.14
CDC42EP3-201ENST00000295324 MST1LQ2TV78 715 aa14.19□□□□□ -0.14
CDC42EP3-201ENST00000295324 TCTEX1D4Q5JR98 221 aa14.19□□□□□ -0.14
CDC42EP3-201ENST00000295324 C8orf31Q8N9H6 132 aa14.19□□□□□ -0.14
CDC42EP3-201ENST00000295324 ANAPC10Q9UM13 185 aa14.19□□□□□ -0.14
CDC42EP3-201ENST00000295324 IGHV4-39P01824 125 aa14.19□□□□□ -0.14
CDC42EP3-201ENST00000295324 DEFB130BP0DP73 79 aa14.19□□□□□ -0.14
CDC42EP3-201ENST00000295324 DEFB130AP0DP74 79 aa14.19□□□□□ -0.14
CDC42EP3-201ENST00000295324 CTSZQ9UBR2 303 aa14.19□□□□□ -0.14
CDC42EP3-201ENST00000295324 TRAV8-2A0A0B4J237 113 aa14.19□□□□□ -0.14
CDC42EP3-201ENST00000295324 RBMY1BA6NDE4 496 aaKnown RBP14.19□□□□□ -0.14
CDC42EP3-201ENST00000295324 RBMY1EA6NEQ0 496 aaKnown RBP14.19□□□□□ -0.14
CDC42EP3-201ENST00000295324 H3BUT2 72 aa14.19□□□□□ -0.14
CDC42EP3-201ENST00000295324 RBMY1DP0C7P1 496 aaKnown RBP14.19□□□□□ -0.14
CDC42EP3-201ENST00000295324 RBMY1A1P0DJD3 496 aaKnown RBP14.19□□□□□ -0.14
CDC42EP3-201ENST00000295324 RBMY1CP0DJD4 496 aa14.19□□□□□ -0.14
CDC42EP3-201ENST00000295324 C5orf30Q96GV9 206 aa14.19□□□□□ -0.14
CDC42EP3-201ENST00000295324 IGHV3-73A0A0B4J1V6 119 aa14.18□□□□□ -0.14
CDC42EP3-201ENST00000295324 NDUFA3O95167 84 aa14.18□□□□□ -0.14
CDC42EP3-201ENST00000295324 C2orf16Q68DN1 1984 aa14.18□□□□□ -0.14
CDC42EP3-201ENST00000295324 KIF26AQ9ULI4 1882 aaPredicted RBP14.18□□□□□ -0.14
CDC42EP3-201ENST00000295324 FAM19A2Q8N3H0 131 aa14.18□□□□□ -0.14
CDC42EP3-201ENST00000295324 PSCAO43653 123 aa14.18□□□□□ -0.14
CDC42EP3-201ENST00000295324 ZNF876PQ49A33 203 aa14.18□□□□□ -0.14
CDC42EP3-201ENST00000295324 SH2D1AO60880 128 aa14.18□□□□□ -0.14
CDC42EP3-201ENST00000295324 GNB1LQ9BYB4 327 aa14.18□□□□□ -0.14
CDC42EP3-201ENST00000295324 DPH3P1Q9H4G8 78 aa14.18□□□□□ -0.14
CDC42EP3-201ENST00000295324 H3BUA1 57 aa14.17□□□□□ -0.14
CDC42EP3-201ENST00000295324 LINC00614P0C842 121 aa14.17□□□□□ -0.14
CDC42EP3-201ENST00000295324 SRSF4Q08170 494 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms