RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 HMGB3O15347 200 aaKnown RBP11.52□□□□□ -0.57
CCDC140-201ENST00000295226 COX7A2P2O60397 106 aa11.52□□□□□ -0.57
CCDC140-201ENST00000295226 PAGE4O60829 102 aa11.52□□□□□ -0.57
CCDC140-201ENST00000295226 SPATA31B1PQ5VZV4 182 aa11.52□□□□□ -0.57
CCDC140-201ENST00000295226 LEMD1Q68G75 181 aa11.52□□□□□ -0.57
CCDC140-201ENST00000295226 ADAMTSL5Q6ZMM2 481 aa11.52□□□□□ -0.57
CCDC140-201ENST00000295226 OR9G4Q8NGQ1 327 aa11.52□□□□□ -0.57
CCDC140-201ENST00000295226 DNAJC4Q9NNZ3 241 aa11.52□□□□□ -0.57
CCDC140-201ENST00000295226 MRPL27Q9P0M9 148 aaKnown RBP11.52□□□□□ -0.57
CCDC140-201ENST00000295226 RABAC1Q9UI14 185 aa11.52□□□□□ -0.57
CCDC140-201ENST00000295226 NOTCH3Q9UM47 2321 aa11.51□□□□□ -0.57
CCDC140-201ENST00000295226 C2orf70A6NJV1 201 aa11.51□□□□□ -0.57
CCDC140-201ENST00000295226 M0QZ24 198 aa11.51□□□□□ -0.57
CCDC140-201ENST00000295226 NPPCP23582 126 aa11.51□□□□□ -0.57
CCDC140-201ENST00000295226 PLP1P60201 277 aa11.51□□□□□ -0.57
CCDC140-201ENST00000295226 SMUG1Q53HV7 270 aa11.51□□□□□ -0.57
CCDC140-201ENST00000295226 METTL26Q96S19 204 aa11.51□□□□□ -0.57
CCDC140-201ENST00000295226 PARLQ9H300 379 aa11.51□□□□□ -0.57
CCDC140-201ENST00000295226 DAZ1Q9NQZ3 744 aaKnown RBP11.51□□□□□ -0.57
CCDC140-201ENST00000295226 HIGD1AQ9Y241 93 aa11.51□□□□□ -0.57
CCDC140-201ENST00000295226 UFC1Q9Y3C8 167 aa11.51□□□□□ -0.57
CCDC140-201ENST00000295226 TRAV5A0A0B4J249 113 aa11.5□□□□□ -0.57
CCDC140-201ENST00000295226 TAS2R45P59539 299 aa11.5□□□□□ -0.57
CCDC140-201ENST00000295226 C10orf113Q5VZT2 155 aa11.5□□□□□ -0.57
CCDC140-201ENST00000295226 SEPSECSQ9HD40 501 aaKnown RBP11.5□□□□□ -0.57
CCDC140-201ENST00000295226 CMYA5Q8N3K9 4069 aa11.5□□□□□ -0.57
CCDC140-201ENST00000295226 PKD1L1Q8TDX9 2849 aa11.5□□□□□ -0.57
CCDC140-201ENST00000295226 CSN3P07498 182 aa11.49□□□□□ -0.57
CCDC140-201ENST00000295226 ARL14EPLP0DKL9 152 aa11.49□□□□□ -0.57
CCDC140-201ENST00000295226 CBLN1P23435 193 aa11.49□□□□□ -0.57
CCDC140-201ENST00000295226 CRYBB3P26998 211 aa11.49□□□□□ -0.57
CCDC140-201ENST00000295226 ELOBQ15370 118 aa11.49□□□□□ -0.57
CCDC140-201ENST00000295226 LINC00305Q7Z4B0 112 aa11.49□□□□□ -0.57
CCDC140-201ENST00000295226 ANAPC16Q96DE5 110 aa11.49□□□□□ -0.57
CCDC140-201ENST00000295226 MRPL32Q9BYC8 188 aaKnown RBP11.49□□□□□ -0.57
CCDC140-201ENST00000295226 SLC25A39Q9BZJ4 359 aaPredicted RBP11.49□□□□□ -0.57
CCDC140-201ENST00000295226 TMEM167BQ9NRX6 74 aa11.49□□□□□ -0.57
CCDC140-201ENST00000295226 IGHV7-4-1A0A0J9YVY3 117 aa11.49□□□□□ -0.57
CCDC140-201ENST00000295226 A8MWP6 167 aa11.49□□□□□ -0.57
CCDC140-201ENST00000295226 K7EMT4 169 aa11.49□□□□□ -0.57
CCDC140-201ENST00000295226 S100A6P06703 90 aa11.49□□□□□ -0.57
CCDC140-201ENST00000295226 GCHFRP30047 84 aa11.49□□□□□ -0.57
CCDC140-201ENST00000295226 FAM78BQ5VT40 261 aa11.49□□□□□ -0.57
CCDC140-201ENST00000295226 PQLC2Q6ZP29 291 aa11.49□□□□□ -0.57
CCDC140-201ENST00000295226 MIR17HGQ75NE6 70 aa11.49□□□□□ -0.57
CCDC140-201ENST00000295226 OR1L4Q8NGR5 311 aa11.49□□□□□ -0.57
CCDC140-201ENST00000295226 RPUSD4Q96CM3 377 aaKnown RBP11.49□□□□□ -0.57
CCDC140-201ENST00000295226 ELOVL1Q9BW60 279 aa11.49□□□□□ -0.57
CCDC140-201ENST00000295226 RHPN1-AS1Q9BWJ2 59 aa11.49□□□□□ -0.57
CCDC140-201ENST00000295226 TECRQ9NZ01 308 aaKnown RBP11.49□□□□□ -0.57
CCDC140-201ENST00000295226 PEMTQ9UBM1 199 aa11.49□□□□□ -0.57
CCDC140-201ENST00000295226 SMPXQ9UHP9 88 aa11.49□□□□□ -0.57
CCDC140-201ENST00000295226 FUT9Q9Y231 359 aa11.49□□□□□ -0.57
CCDC140-201ENST00000295226 ELOA3CA0A087WX78 387 aaPredicted RBP11.48□□□□□ -0.57
CCDC140-201ENST00000295226 CHEK1O14757 476 aa11.48□□□□□ -0.57
CCDC140-201ENST00000295226 SNRPCP09234 159 aaKnown RBP11.48□□□□□ -0.57
CCDC140-201ENST00000295226 ZNF674Q2M3X9 581 aa11.48□□□□□ -0.57
CCDC140-201ENST00000295226 CST9LP1Q5W188 147 aa11.48□□□□□ -0.57
CCDC140-201ENST00000295226 GATAD1Q8WUU5 269 aa11.48□□□□□ -0.57
CCDC140-201ENST00000295226 SAV1Q9H4B6 383 aaPredicted RBP11.48□□□□□ -0.57
CCDC140-201ENST00000295226 U3KQE9 123 aa11.48□□□□□ -0.57
CCDC140-201ENST00000295226 ZNF98A6NK75 572 aa11.47□□□□□ -0.57
CCDC140-201ENST00000295226 H3BRN7 92 aa11.47□□□□□ -0.57
CCDC140-201ENST00000295226 RPL23P62829 140 aaKnown RBP11.47□□□□□ -0.57
CCDC140-201ENST00000295226 ADIRFQ15847 76 aa11.47□□□□□ -0.57
CCDC140-201ENST00000295226 KRTAP21-3Q3LHN1 58 aa11.47□□□□□ -0.57
CCDC140-201ENST00000295226 PFDN5Q99471 154 aa11.47□□□□□ -0.57
CCDC140-201ENST00000295226 SHANK2-AS3Q9BTD1 123 aa11.47□□□□□ -0.57
CCDC140-201ENST00000295226 TRBV24-1A0A075B6N3 115 aa11.46□□□□□ -0.57
CCDC140-201ENST00000295226 BUB3O43684 328 aa11.46□□□□□ -0.57
CCDC140-201ENST00000295226 SAP30O75446 220 aa11.46□□□□□ -0.57
CCDC140-201ENST00000295226 CD33P20138 364 aa11.46□□□□□ -0.57
CCDC140-201ENST00000295226 S100PP25815 95 aa11.46□□□□□ -0.57
CCDC140-201ENST00000295226 BTF3L4Q96K17 158 aa11.46□□□□□ -0.57
CCDC140-201ENST00000295226 PPP1R2P9O14990 202 aa11.46□□□□□ -0.58
CCDC140-201ENST00000295226 C8orf88P0DMB2 117 aa11.46□□□□□ -0.58
CCDC140-201ENST00000295226 IGKV3-7A0A075B6H7 116 aa11.45□□□□□ -0.58
CCDC140-201ENST00000295226 H7BYZ3 331 aa11.45□□□□□ -0.58
CCDC140-201ENST00000295226 IGLL1P15814 213 aa11.45□□□□□ -0.58
CCDC140-201ENST00000295226 RPS10P46783 165 aaKnown RBP11.45□□□□□ -0.58
CCDC140-201ENST00000295226 OR8I2Q8N0Y5 310 aa11.45□□□□□ -0.58
CCDC140-201ENST00000295226 C11orf52Q96A22 123 aa11.45□□□□□ -0.58
CCDC140-201ENST00000295226 ATP5G3P48201 142 aa11.44□□□□□ -0.58
CCDC140-201ENST00000295226 UBE2G2P60604 165 aa11.44□□□□□ -0.58
CCDC140-201ENST00000295226 C16orf54Q6UWD8 224 aa11.44□□□□□ -0.58
CCDC140-201ENST00000295226 ZFP82Q8N141 532 aa11.44□□□□□ -0.58
CCDC140-201ENST00000295226 WFDC9Q8NEX5 89 aa11.44□□□□□ -0.58
CCDC140-201ENST00000295226 DYNLRB2Q8TF09 96 aa11.44□□□□□ -0.58
CCDC140-201ENST00000295226 C2CD4CQ8TF44 421 aa11.44□□□□□ -0.58
CCDC140-201ENST00000295226 FAM210BQ96KR6 192 aa11.44□□□□□ -0.58
CCDC140-201ENST00000295226 FAM167A-AS1Q96KT0 104 aa11.44□□□□□ -0.58
CCDC140-201ENST00000295226 SLC25A2Q9BXI2 301 aa11.44□□□□□ -0.58
CCDC140-201ENST00000295226 LY96Q9Y6Y9 160 aa11.44□□□□□ -0.58
CCDC140-201ENST00000295226 C5orf52A6NGY3 159 aa11.43□□□□□ -0.58
CCDC140-201ENST00000295226 PYYP10082 97 aa11.43□□□□□ -0.58
CCDC140-201ENST00000295226 RPL11P62913 178 aaKnown RBP11.43□□□□□ -0.58
CCDC140-201ENST00000295226 DEFB114Q30KQ6 69 aa11.43□□□□□ -0.58
CCDC140-201ENST00000295226 GLMPQ8WWB7 406 aa11.43□□□□□ -0.58
CCDC140-201ENST00000295226 IMMP2LQ96T52 175 aa11.43□□□□□ -0.58
CCDC140-201ENST00000295226 SMAD5-AS1Q9Y6J3 95 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms