RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 SMIM3Q9BZL3 60 aa6.87□□□□□ -1.31
HMHB1-201ENST00000289448 ARV1Q9H2C2 271 aa6.87□□□□□ -1.31
HMHB1-201ENST00000289448 PSENENQ9NZ42 101 aa6.87□□□□□ -1.31
HMHB1-201ENST00000289448 F6UB75 175 aa6.86□□□□□ -1.31
HMHB1-201ENST00000289448 H3BP45 60 aa6.86□□□□□ -1.31
HMHB1-201ENST00000289448 IGKV3-20P01619 116 aa6.86□□□□□ -1.31
HMHB1-201ENST00000289448 GATA2P23769 480 aaPredicted RBP6.86□□□□□ -1.31
HMHB1-201ENST00000289448 FXYD7P58549 80 aa6.86□□□□□ -1.31
HMHB1-201ENST00000289448 RAB11AP62491 216 aa6.86□□□□□ -1.31
HMHB1-201ENST00000289448 HBG1P69891 147 aa6.86□□□□□ -1.31
HMHB1-201ENST00000289448 HBG2P69892 147 aa6.86□□□□□ -1.31
HMHB1-201ENST00000289448 NHLH2Q02577 135 aa6.86□□□□□ -1.31
HMHB1-201ENST00000289448 C12orf74Q32Q52 190 aa6.86□□□□□ -1.31
HMHB1-201ENST00000289448 SPANXN5Q5MJ07 72 aa6.86□□□□□ -1.31
HMHB1-201ENST00000289448 C1orf194Q5T5A4 169 aa6.86□□□□□ -1.31
HMHB1-201ENST00000289448 C20orf173Q96LM9 149 aa6.86□□□□□ -1.31
HMHB1-201ENST00000289448 SCRT1Q9BWW7 348 aa6.86□□□□□ -1.31
HMHB1-201ENST00000289448 SAV1Q9H4B6 383 aaPredicted RBP6.86□□□□□ -1.31
HMHB1-201ENST00000289448 WFDC1Q9HC57 220 aa6.86□□□□□ -1.31
HMHB1-201ENST00000289448 MED9Q9NWA0 146 aa6.86□□□□□ -1.31
HMHB1-201ENST00000289448 DNAH17Q9UFH2 4485 aa6.86□□□□□ -1.31
HMHB1-201ENST00000289448 C11orf94C9JXX5 98 aa6.85□□□□□ -1.31
HMHB1-201ENST00000289448 CST7O76096 145 aa6.85□□□□□ -1.31
HMHB1-201ENST00000289448 FABP1P07148 127 aa6.85□□□□□ -1.31
HMHB1-201ENST00000289448 S100A1P23297 94 aa6.85□□□□□ -1.31
HMHB1-201ENST00000289448 RPP30P78346 268 aaKnown RBP6.85□□□□□ -1.31
HMHB1-201ENST00000289448 CLINT1Q14677 625 aa6.85□□□□□ -1.31
HMHB1-201ENST00000289448 TMEM14EPQ6UXP3 125 aa6.85□□□□□ -1.31
HMHB1-201ENST00000289448 ZNF705AQ6ZN79 300 aaPredicted RBP6.85□□□□□ -1.31
HMHB1-201ENST00000289448 OR8I2Q8N0Y5 310 aa6.85□□□□□ -1.31
HMHB1-201ENST00000289448 ZNF709Q8N972 641 aa6.85□□□□□ -1.31
HMHB1-201ENST00000289448 OR5C1Q8NGR4 320 aa6.85□□□□□ -1.31
HMHB1-201ENST00000289448 TMED6Q8WW62 240 aa6.85□□□□□ -1.31
HMHB1-201ENST00000289448 ATP5SQ99766 215 aa6.85□□□□□ -1.31
HMHB1-201ENST00000289448 PFDN2Q9UHV9 154 aa6.85□□□□□ -1.31
HMHB1-201ENST00000289448 STRAPQ9Y3F4 350 aaKnown RBP6.85□□□□□ -1.31
HMHB1-201ENST00000289448 PKHD1P08F94 4074 aa6.84□□□□□ -1.31
HMHB1-201ENST00000289448 IGHV4-4A0A075B6R2 117 aa6.84□□□□□ -1.31
HMHB1-201ENST00000289448 ZNF98A6NK75 572 aa6.84□□□□□ -1.31
HMHB1-201ENST00000289448 ZNF705FA8MVS1 300 aaPredicted RBP6.84□□□□□ -1.31
HMHB1-201ENST00000289448 IFNA5P01569 189 aa6.84□□□□□ -1.31
HMHB1-201ENST00000289448 SEC11BP0C7V7 166 aa6.84□□□□□ -1.31
HMHB1-201ENST00000289448 METTL15P1P0C7V9 234 aa6.84□□□□□ -1.31
HMHB1-201ENST00000289448 ZNF705DP0CH99 300 aaPredicted RBP6.84□□□□□ -1.31
HMHB1-201ENST00000289448 ZNF705BP0CI00 300 aaPredicted RBP6.84□□□□□ -1.31
HMHB1-201ENST00000289448 PSMB3P49720 205 aa6.84□□□□□ -1.31
HMHB1-201ENST00000289448 NUTF2P61970 127 aaKnown RBP6.84□□□□□ -1.31
HMHB1-201ENST00000289448 FAM74A1Q5RGS3 127 aa6.84□□□□□ -1.31
HMHB1-201ENST00000289448 FOXI2Q6ZQN5 318 aa6.84□□□□□ -1.31
HMHB1-201ENST00000289448 RNF141Q8WVD5 230 aa6.84□□□□□ -1.31
HMHB1-201ENST00000289448 GNPNAT1Q96EK6 184 aaPredicted RBP6.84□□□□□ -1.31
HMHB1-201ENST00000289448 C1QTNF4Q9BXJ3 329 aa6.84□□□□□ -1.31
HMHB1-201ENST00000289448 SLC35B3Q9H1N7 401 aa6.84□□□□□ -1.31
HMHB1-201ENST00000289448 KIAA1109Q2LD37 5005 aa6.83□□□□□ -1.32
HMHB1-201ENST00000289448 TRAV10A0A0B4J240 114 aa6.83□□□□□ -1.32
HMHB1-201ENST00000289448 A0A0J9YX75 114 aa6.83□□□□□ -1.32
HMHB1-201ENST00000289448 PMS2P5A8MQ11 134 aa6.83□□□□□ -1.32
HMHB1-201ENST00000289448 ISLRO14498 428 aa6.83□□□□□ -1.32
HMHB1-201ENST00000289448 ORM2P19652 201 aa6.83□□□□□ -1.32
HMHB1-201ENST00000289448 ID1P41134 155 aa6.83□□□□□ -1.32
HMHB1-201ENST00000289448 SULT1A2P50226 295 aa6.83□□□□□ -1.32
HMHB1-201ENST00000289448 RAB5CP51148 216 aa6.83□□□□□ -1.32
HMHB1-201ENST00000289448 TCTAP57738 103 aa6.83□□□□□ -1.32
HMHB1-201ENST00000289448 ATP6V1FQ16864 119 aa6.83□□□□□ -1.32
HMHB1-201ENST00000289448 FAM78BQ5VT40 261 aa6.83□□□□□ -1.32
HMHB1-201ENST00000289448 IGFL4Q6B9Z1 124 aa6.83□□□□□ -1.32
HMHB1-201ENST00000289448 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.83□□□□□ -1.32
HMHB1-201ENST00000289448 TMEM144Q7Z5S9 345 aa6.83□□□□□ -1.32
HMHB1-201ENST00000289448 COMMD7Q86VX2 200 aa6.83□□□□□ -1.32
HMHB1-201ENST00000289448 HSD17B11Q8NBQ5 300 aa6.83□□□□□ -1.32
HMHB1-201ENST00000289448 OR4B1Q8NGF8 309 aa6.83□□□□□ -1.32
HMHB1-201ENST00000289448 PCNPQ8WW12 178 aaKnown RBP6.83□□□□□ -1.32
HMHB1-201ENST00000289448 SAT2Q96F10 170 aaPredicted RBP6.83□□□□□ -1.32
HMHB1-201ENST00000289448 CLUHP3Q96NS8 147 aa6.83□□□□□ -1.32
HMHB1-201ENST00000289448 NEU1Q99519 415 aa6.83□□□□□ -1.32
HMHB1-201ENST00000289448 RSG1Q9BU20 258 aa6.83□□□□□ -1.32
HMHB1-201ENST00000289448 TMEM147Q9BVK8 224 aa6.83□□□□□ -1.32
HMHB1-201ENST00000289448 PARD6GQ9BYG4 376 aaPredicted RBP6.83□□□□□ -1.32
HMHB1-201ENST00000289448 SLC25A22Q9H936 323 aa6.83□□□□□ -1.32
HMHB1-201ENST00000289448 IGHV3OR16-12A0A075B7B8 117 aa6.82□□□□□ -1.32
HMHB1-201ENST00000289448 DEFB131BA0A096LNP1 70 aa6.82□□□□□ -1.32
HMHB1-201ENST00000289448 TRAV8-2A0A0B4J237 113 aa6.82□□□□□ -1.32
HMHB1-201ENST00000289448 EMP1P54849 157 aa6.82□□□□□ -1.32
HMHB1-201ENST00000289448 BLOC1S1P78537 153 aa6.82□□□□□ -1.32
HMHB1-201ENST00000289448 AKR1C1Q04828 323 aa6.82□□□□□ -1.32
HMHB1-201ENST00000289448 SLC38A11Q08AI6 406 aa6.82□□□□□ -1.32
HMHB1-201ENST00000289448 ARL16Q0P5N6 197 aa6.82□□□□□ -1.32
HMHB1-201ENST00000289448 AMTNQ6UX39 209 aa6.82□□□□□ -1.32
HMHB1-201ENST00000289448 C1orf158Q8N1D5 194 aa6.82□□□□□ -1.32
HMHB1-201ENST00000289448 BPIFCQ8NFQ6 507 aa6.82□□□□□ -1.32
HMHB1-201ENST00000289448 OR10P1Q8NGE3 313 aa6.82□□□□□ -1.32
HMHB1-201ENST00000289448 OR1B1Q8NGR6 318 aa6.82□□□□□ -1.32
HMHB1-201ENST00000289448 SCGB1C1Q8TD33 95 aa6.82□□□□□ -1.32
HMHB1-201ENST00000289448 C16orf92Q96LL3 132 aa6.82□□□□□ -1.32
HMHB1-201ENST00000289448 PLA2G2EQ9NZK7 142 aa6.82□□□□□ -1.32
HMHB1-201ENST00000289448 DOK5Q9P104 306 aa6.82□□□□□ -1.32
HMHB1-201ENST00000289448 SLC45A2Q9UMX9 530 aa6.82□□□□□ -1.32
HMHB1-201ENST00000289448 SMCO3A2RU48 225 aa6.81□□□□□ -1.32
HMHB1-201ENST00000289448 SMIM9A6NGZ8 99 aa6.81□□□□□ -1.32
HMHB1-201ENST00000289448 A8MTW9 85 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms