RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 H0YJW9 148 aa14.23□□□□□ -0.13
PCDHA13-201ENST00000289272 IGHV3OR16-12A0A075B7B8 117 aa14.22□□□□□ -0.13
PCDHA13-201ENST00000289272 H3BMM0 161 aa14.22□□□□□ -0.13
PCDHA13-201ENST00000289272 UBE2WQ96B02 151 aa14.22□□□□□ -0.13
PCDHA13-201ENST00000289272 VGLL1Q99990 258 aa14.22□□□□□ -0.13
PCDHA13-201ENST00000289272 SHANK2-AS3Q9BTD1 123 aa14.22□□□□□ -0.13
PCDHA13-201ENST00000289272 TICRRQ7Z2Z1 1910 aa14.22□□□□□ -0.13
PCDHA13-201ENST00000289272 NPIPB5A8MRT5 1133 aa14.22□□□□□ -0.13
PCDHA13-201ENST00000289272 NCR2O95944 276 aa14.22□□□□□ -0.13
PCDHA13-201ENST00000289272 EFNA4P52798 201 aa14.22□□□□□ -0.13
PCDHA13-201ENST00000289272 C5orf24Q7Z6I8 188 aa14.22□□□□□ -0.13
PCDHA13-201ENST00000289272 PEMTQ9UBM1 199 aa14.22□□□□□ -0.13
PCDHA13-201ENST00000289272 EP300Q09472 2414 aaPredicted RBP14.22□□□□□ -0.13
PCDHA13-201ENST00000289272 MYOD1P15172 320 aa14.21□□□□□ -0.13
PCDHA13-201ENST00000289272 SFTA2Q6UW10 78 aa14.21□□□□□ -0.13
PCDHA13-201ENST00000289272 NCOR1O75376 2440 aa14.21□□□□□ -0.13
PCDHA13-201ENST00000289272 TRAV3A0A0B4J244 114 aa14.21□□□□□ -0.13
PCDHA13-201ENST00000289272 UTF1Q5T230 341 aa14.21□□□□□ -0.13
PCDHA13-201ENST00000289272 UNQ6494/PRO21346Q6UXR6 183 aa14.21□□□□□ -0.13
PCDHA13-201ENST00000289272 PRSS22Q9GZN4 317 aa14.21□□□□□ -0.13
PCDHA13-201ENST00000289272 EXOC3-AS1Q8N2X6 119 aa14.21□□□□□ -0.13
PCDHA13-201ENST00000289272 FANCMQ8IYD8 2048 aa14.21□□□□□ -0.13
PCDHA13-201ENST00000289272 MYMXA0A1B0GTQ4 84 aa14.21□□□□□ -0.14
PCDHA13-201ENST00000289272 ZNF688P0C7X2 276 aa14.21□□□□□ -0.14
PCDHA13-201ENST00000289272 CDPF1Q6NVV7 123 aa14.21□□□□□ -0.14
PCDHA13-201ENST00000289272 CD177Q8N6Q3 437 aa14.2□□□□□ -0.14
PCDHA13-201ENST00000289272 C9orf153Q5TBE3 101 aa14.2□□□□□ -0.14
PCDHA13-201ENST00000289272 AMN1Q8IY45 258 aa14.2□□□□□ -0.14
PCDHA13-201ENST00000289272 Q8NFD4 153 aa14.2□□□□□ -0.14
PCDHA13-201ENST00000289272 IGHV3OR16-10A0A075B7F0 116 aa14.2□□□□□ -0.14
PCDHA13-201ENST00000289272 IGKV3-15P01624 115 aa14.2□□□□□ -0.14
PCDHA13-201ENST00000289272 C9JAW5 83 aa14.19□□□□□ -0.14
PCDHA13-201ENST00000289272 CLEC19AQ6UXS0 136 aa14.19□□□□□ -0.14
PCDHA13-201ENST00000289272 RNASE1P07998 156 aaKnown RBP14.19□□□□□ -0.14
PCDHA13-201ENST00000289272 ARMS2P0C7Q2 107 aa14.19□□□□□ -0.14
PCDHA13-201ENST00000289272 SLC25A20O43772 301 aa14.19□□□□□ -0.14
PCDHA13-201ENST00000289272 IGKV1-39P01597 117 aa14.19□□□□□ -0.14
PCDHA13-201ENST00000289272 IGKV1D-39P04432 117 aa14.19□□□□□ -0.14
PCDHA13-201ENST00000289272 DNAJC30Q96LL9 226 aa14.19□□□□□ -0.14
PCDHA13-201ENST00000289272 PI4KAP42356 2102 aa14.18□□□□□ -0.14
PCDHA13-201ENST00000289272 K7EMI3 77 aa14.18□□□□□ -0.14
PCDHA13-201ENST00000289272 CD7P09564 240 aa14.18□□□□□ -0.14
PCDHA13-201ENST00000289272 HAPLN4Q86UW8 402 aa14.18□□□□□ -0.14
PCDHA13-201ENST00000289272 RASL10AQ92737 203 aa14.18□□□□□ -0.14
PCDHA13-201ENST00000289272 CYYR1Q96J86 154 aa14.18□□□□□ -0.14
PCDHA13-201ENST00000289272 ESPL1Q14674 2120 aa14.18□□□□□ -0.14
PCDHA13-201ENST00000289272 GAGE5Q13069 117 aa14.18□□□□□ -0.14
PCDHA13-201ENST00000289272 GAGE6Q13070 117 aa14.18□□□□□ -0.14
PCDHA13-201ENST00000289272 SIGLEC15Q6ZMC9 328 aa14.18□□□□□ -0.14
PCDHA13-201ENST00000289272 ETDBQ3ZM63 59 aa14.18□□□□□ -0.14
PCDHA13-201ENST00000289272 MINOS1Q5TGZ0 78 aa14.17□□□□□ -0.14
PCDHA13-201ENST00000289272 MINOS1-NBL1R4GNA1 71 aa14.17□□□□□ -0.14
PCDHA13-201ENST00000289272 IGKV2-40A0A087WW87 121 aaPredicted RBP14.17□□□□□ -0.14
PCDHA13-201ENST00000289272 WIPF3A6NGB9 483 aa14.17□□□□□ -0.14
PCDHA13-201ENST00000289272 IGKV2D-40P01614 121 aaPredicted RBP14.17□□□□□ -0.14
PCDHA13-201ENST00000289272 C1QTNF4Q9BXJ3 329 aa14.17□□□□□ -0.14
PCDHA13-201ENST00000289272 GAGE12JA6NER3 117 aa14.17□□□□□ -0.14
PCDHA13-201ENST00000289272 GAGE7O76087 117 aa14.17□□□□□ -0.14
PCDHA13-201ENST00000289272 GAGE12FP0CL80 117 aa14.17□□□□□ -0.14
PCDHA13-201ENST00000289272 GAGE12GP0CL81 117 aa14.17□□□□□ -0.14
PCDHA13-201ENST00000289272 GAGE12IP0CL82 117 aa14.17□□□□□ -0.14
PCDHA13-201ENST00000289272 GAGE4Q13068 117 aa14.17□□□□□ -0.14
PCDHA13-201ENST00000289272 LY6DQ14210 128 aa14.17□□□□□ -0.14
PCDHA13-201ENST00000289272 LINC01545Q5VT33 79 aa14.17□□□□□ -0.14
PCDHA13-201ENST00000289272 ZNF672Q499Z4 452 aaPredicted RBP14.17□□□□□ -0.14
PCDHA13-201ENST00000289272 IGHV3-35A0A0C4DH35 117 aa14.16□□□□□ -0.14
PCDHA13-201ENST00000289272 TMEM86BQ8N661 226 aa14.16□□□□□ -0.14
PCDHA13-201ENST00000289272 ZNF114Q8NC26 417 aa14.16□□□□□ -0.14
PCDHA13-201ENST00000289272 TRAV40A0A0B4J280 105 aa14.16□□□□□ -0.14
PCDHA13-201ENST00000289272 DUX3Q96PT4 197 aa14.16□□□□□ -0.14
PCDHA13-201ENST00000289272 PROK2Q9HC23 129 aa14.16□□□□□ -0.14
PCDHA13-201ENST00000289272 METRNQ9UJH8 293 aa14.16□□□□□ -0.14
PCDHA13-201ENST00000289272 PLXNB3Q9ULL4 1909 aa14.16□□□□□ -0.14
PCDHA13-201ENST00000289272 LY6G6EA0A0G2JKS1 128 aa14.16□□□□□ -0.14
PCDHA13-201ENST00000289272 IGHV3-23P01764 117 aa14.16□□□□□ -0.14
PCDHA13-201ENST00000289272 C3orf36Q3SXR2 165 aa14.16□□□□□ -0.14
PCDHA13-201ENST00000289272 U3KQA8 63 aa14.16□□□□□ -0.14
PCDHA13-201ENST00000289272 FCN3O75636 299 aa14.15□□□□□ -0.14
PCDHA13-201ENST00000289272 Q6ZSR3 168 aa14.15□□□□□ -0.14
PCDHA13-201ENST00000289272 NDUFB8O95169 186 aa14.15□□□□□ -0.14
PCDHA13-201ENST00000289272 CRPP02741 224 aa14.15□□□□□ -0.14
PCDHA13-201ENST00000289272 S4R3C0 116 aa14.15□□□□□ -0.14
PCDHA13-201ENST00000289272 PRR20EP86478 221 aa14.14□□□□□ -0.15
PCDHA13-201ENST00000289272 PRR20CP86479 221 aa14.14□□□□□ -0.15
PCDHA13-201ENST00000289272 PRR20DP86480 221 aa14.14□□□□□ -0.15
PCDHA13-201ENST00000289272 PRR20BP86481 221 aa14.14□□□□□ -0.15
PCDHA13-201ENST00000289272 PRR20AP86496 221 aa14.14□□□□□ -0.15
PCDHA13-201ENST00000289272 NDUFA4L2Q9NRX3 87 aa14.14□□□□□ -0.15
PCDHA13-201ENST00000289272 POU2AF1Q16633 256 aa14.14□□□□□ -0.15
PCDHA13-201ENST00000289272 IGHV1-8P0DP01 117 aa14.14□□□□□ -0.15
PCDHA13-201ENST00000289272 HLA-DMBP28068 263 aa14.14□□□□□ -0.15
PCDHA13-201ENST00000289272 THAP8Q8NA92 274 aa14.14□□□□□ -0.15
PCDHA13-201ENST00000289272 DOCK9Q9BZ29 2069 aa14.14□□□□□ -0.15
PCDHA13-201ENST00000289272 SNRNP200O75643 2136 aaKnown RBP14.14□□□□□ -0.15
PCDHA13-201ENST00000289272 TMEM178BH3BS89 294 aa14.14□□□□□ -0.15
PCDHA13-201ENST00000289272 M0R1W7 72 aa14.14□□□□□ -0.15
PCDHA13-201ENST00000289272 IGFL3Q6UXB1 125 aa14.14□□□□□ -0.15
PCDHA13-201ENST00000289272 RCHY1Q96PM5 261 aa14.14□□□□□ -0.15
PCDHA13-201ENST00000289272 HS3ST6Q96QI5 342 aa14.14□□□□□ -0.15
PCDHA13-201ENST00000289272 ZNF747Q9BV97 191 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms