RNA–Protein interactions for RNA: ENST00000287538.9

ZIC3-201, Transcript of Zic family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIC3, Length 3,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3-201ENST00000287538 HIST1H1AQ02539 215 aaPredicted RBP10.26□□□□□ -0.77
ZIC3-201ENST00000287538 BLNKQ8WV28 456 aa10.26□□□□□ -0.77
ZIC3-201ENST00000287538 CHD6Q8TD26 2715 aa10.26□□□□□ -0.77
ZIC3-201ENST00000287538 G3V4G9 280 aa10.26□□□□□ -0.77
ZIC3-201ENST00000287538 TNFRSF13BO14836 293 aaPredicted RBP10.26□□□□□ -0.77
ZIC3-201ENST00000287538 RNASE2P10153 161 aaKnown RBP10.26□□□□□ -0.77
ZIC3-201ENST00000287538 DLX6P56179 175 aa10.26□□□□□ -0.77
ZIC3-201ENST00000287538 OR1N2Q8NGR9 330 aa10.26□□□□□ -0.77
ZIC3-201ENST00000287538 SVIPQ8NHG7 77 aa10.26□□□□□ -0.77
ZIC3-201ENST00000287538 URB1-AS1Q96HZ7 61 aa10.26□□□□□ -0.77
ZIC3-201ENST00000287538 SCRT2Q9NQ03 307 aa10.26□□□□□ -0.77
ZIC3-201ENST00000287538 IGKV1OR2-108A0A075B7D4 117 aa10.26□□□□□ -0.77
ZIC3-201ENST00000287538 PRSS47A8MTI9 375 aa10.26□□□□□ -0.77
ZIC3-201ENST00000287538 COL8A1P27658 744 aa10.26□□□□□ -0.77
ZIC3-201ENST00000287538 FAM120AOSQ5T036 256 aa10.26□□□□□ -0.77
ZIC3-201ENST00000287538 GTF2H5Q6ZYL4 71 aa10.26□□□□□ -0.77
ZIC3-201ENST00000287538 MAPK1IP1LQ8NDC0 245 aa10.26□□□□□ -0.77
ZIC3-201ENST00000287538 WIPF2Q8TF74 440 aaPredicted RBP10.26□□□□□ -0.77
ZIC3-201ENST00000287538 SLC25A33Q9BSK2 321 aa10.26□□□□□ -0.77
ZIC3-201ENST00000287538 VMO1Q7Z5L0 202 aa10.25□□□□□ -0.77
ZIC3-201ENST00000287538 NEU4Q8WWR8 484 aaPredicted RBP10.25□□□□□ -0.77
ZIC3-201ENST00000287538 IGF2BP2-AS1Q96M15 143 aa10.25□□□□□ -0.77
ZIC3-201ENST00000287538 MRPL36Q9P0J6 103 aaKnown RBP10.25□□□□□ -0.77
ZIC3-201ENST00000287538 DPM3Q9P2X0 92 aa10.25□□□□□ -0.77
ZIC3-201ENST00000287538 IGHV1-24A0A0C4DH33 117 aa10.25□□□□□ -0.77
ZIC3-201ENST00000287538 GNG7O60262 68 aa10.25□□□□□ -0.77
ZIC3-201ENST00000287538 SUB1P53999 127 aaKnown RBP eCLIP10.25□□□□□ -0.77
ZIC3-201ENST00000287538 TMEM177Q53S58 311 aa10.25□□□□□ -0.77
ZIC3-201ENST00000287538 PPP1R27Q86WC6 154 aa10.25□□□□□ -0.77
ZIC3-201ENST00000287538 C5orf17Q8NAS9 161 aa10.25□□□□□ -0.77
ZIC3-201ENST00000287538 VPS13CQ709C8 3753 aa10.24□□□□□ -0.77
ZIC3-201ENST00000287538 FOXE3Q13461 319 aa10.24□□□□□ -0.77
ZIC3-201ENST00000287538 RASL11AQ6T310 242 aa10.24□□□□□ -0.77
ZIC3-201ENST00000287538 COX7A2P2O60397 106 aa10.24□□□□□ -0.77
ZIC3-201ENST00000287538 TNFRSF14Q92956 283 aa10.24□□□□□ -0.77
ZIC3-201ENST00000287538 HIGD1CA8MV81 97 aa10.24□□□□□ -0.77
ZIC3-201ENST00000287538 ATP5J2P56134 94 aa10.24□□□□□ -0.77
ZIC3-201ENST00000287538 Q5PR19 223 aa10.24□□□□□ -0.77
ZIC3-201ENST00000287538 SAMD13Q5VXD3 122 aa10.24□□□□□ -0.77
ZIC3-201ENST00000287538 ZNF503Q96F45 646 aa10.24□□□□□ -0.77
ZIC3-201ENST00000287538 NDUFA4L2Q9NRX3 87 aa10.24□□□□□ -0.77
ZIC3-201ENST00000287538 CRXO43186 299 aaPredicted RBP10.23□□□□□ -0.77
ZIC3-201ENST00000287538 RUSC1-AS1Q66K80 236 aa10.23□□□□□ -0.77
ZIC3-201ENST00000287538 LINC00574Q9H8X3 128 aa10.23□□□□□ -0.77
ZIC3-201ENST00000287538 H3BUT2 72 aa10.23□□□□□ -0.77
ZIC3-201ENST00000287538 PYYP10082 97 aa10.23□□□□□ -0.77
ZIC3-201ENST00000287538 CD69Q07108 199 aa10.23□□□□□ -0.77
ZIC3-201ENST00000287538 BRD3OSQ6XYD6 125 aa10.23□□□□□ -0.77
ZIC3-201ENST00000287538 BPIFA4PQ86YQ2 179 aa10.23□□□□□ -0.77
ZIC3-201ENST00000287538 TMEM167AQ8TBQ9 72 aa10.23□□□□□ -0.77
ZIC3-201ENST00000287538 SRSF12Q8WXF0 261 aaKnown RBP10.23□□□□□ -0.77
ZIC3-201ENST00000287538 GRAMD2BQ96HH9 432 aa10.23□□□□□ -0.77
ZIC3-201ENST00000287538 CLUHP3Q96NS8 147 aa10.23□□□□□ -0.77
ZIC3-201ENST00000287538 LINC00527Q9UJ94 153 aa10.23□□□□□ -0.77
ZIC3-201ENST00000287538 SIGLEC9Q9Y336 463 aa10.23□□□□□ -0.77
ZIC3-201ENST00000287538 MTORP42345 2549 aa10.23□□□□□ -0.77
ZIC3-201ENST00000287538 FAM90A9PA6NNJ1 464 aa10.23□□□□□ -0.77
ZIC3-201ENST00000287538 OR2J3O76001 311 aa10.23□□□□□ -0.77
ZIC3-201ENST00000287538 IGLV1-47P01700 117 aa10.23□□□□□ -0.77
ZIC3-201ENST00000287538 LGALS7P47929 136 aa10.23□□□□□ -0.77
ZIC3-201ENST00000287538 PRR20EP86478 221 aa10.23□□□□□ -0.77
ZIC3-201ENST00000287538 PRR20CP86479 221 aa10.23□□□□□ -0.77
ZIC3-201ENST00000287538 PRR20DP86480 221 aa10.23□□□□□ -0.77
ZIC3-201ENST00000287538 PRR20BP86481 221 aa10.23□□□□□ -0.77
ZIC3-201ENST00000287538 PRR20AP86496 221 aa10.23□□□□□ -0.77
ZIC3-201ENST00000287538 MAP1LC3CQ9BXW4 147 aa10.23□□□□□ -0.77
ZIC3-201ENST00000287538 IGLV2-23P01705 113 aa10.22□□□□□ -0.77
ZIC3-201ENST00000287538 LYZP61626 148 aa10.22□□□□□ -0.77
ZIC3-201ENST00000287538 TMEM30BQ3MIR4 351 aa10.22□□□□□ -0.77
ZIC3-201ENST00000287538 AMMECR1Q9Y4X0 333 aaPredicted RBP10.22□□□□□ -0.77
ZIC3-201ENST00000287538 A0A1W2PRE2 83 aa10.22□□□□□ -0.77
ZIC3-201ENST00000287538 MORN5Q5VZ52 161 aa10.22□□□□□ -0.77
ZIC3-201ENST00000287538 UFSP1Q6NVU6 142 aa10.22□□□□□ -0.77
ZIC3-201ENST00000287538 JMJD8Q96S16 334 aa10.22□□□□□ -0.77
ZIC3-201ENST00000287538 ZNF138P52744 262 aa10.21□□□□□ -0.77
ZIC3-201ENST00000287538 EFNA4P52798 201 aa10.21□□□□□ -0.77
ZIC3-201ENST00000287538 TMEM97Q5BJF2 176 aa10.21□□□□□ -0.77
ZIC3-201ENST00000287538 FAM162BQ5T6X4 162 aa10.21□□□□□ -0.77
ZIC3-201ENST00000287538 DYNAPQ8N1N2 210 aa10.21□□□□□ -0.77
ZIC3-201ENST00000287538 MBD6Q96DN6 1003 aa10.21□□□□□ -0.77
ZIC3-201ENST00000287538 CCL19Q99731 98 aa10.21□□□□□ -0.77
ZIC3-201ENST00000287538 ZNF257Q9Y2Q1 563 aa10.21□□□□□ -0.77
ZIC3-201ENST00000287538 PRRC2AP48634 2157 aaKnown RBP10.21□□□□□ -0.77
ZIC3-201ENST00000287538 HLA-DRB1P01911 266 aa10.21□□□□□ -0.77
ZIC3-201ENST00000287538 TMEM219Q86XT9 240 aa10.21□□□□□ -0.77
ZIC3-201ENST00000287538 C1RLQ9NZP8 487 aa10.21□□□□□ -0.77
ZIC3-201ENST00000287538 ABCA2Q9BZC7 2435 aa10.21□□□□□ -0.78
ZIC3-201ENST00000287538 HIST1H1EP10412 219 aaKnown RBP10.21□□□□□ -0.78
ZIC3-201ENST00000287538 CEACAM3P40198 252 aa10.21□□□□□ -0.78
ZIC3-201ENST00000287538 UBE2L3P68036 154 aaKnown RBP10.21□□□□□ -0.78
ZIC3-201ENST00000287538 ECSCRQ19T08 205 aa10.21□□□□□ -0.78
ZIC3-201ENST00000287538 C11orf71Q6IPW1 123 aa10.21□□□□□ -0.78
ZIC3-201ENST00000287538 TCF24Q7RTU0 167 aa10.21□□□□□ -0.78
ZIC3-201ENST00000287538 CGB1A6NKQ9 187 aa10.2□□□□□ -0.78
ZIC3-201ENST00000287538 VWC2LB2RUY7 222 aa10.2□□□□□ -0.78
ZIC3-201ENST00000287538 ZNF137PP52743 207 aa10.2□□□□□ -0.78
ZIC3-201ENST00000287538 TAS2R45P59539 299 aa10.2□□□□□ -0.78
ZIC3-201ENST00000287538 C2orf91Q6ZV80 131 aa10.2□□□□□ -0.78
ZIC3-201ENST00000287538 RAB37Q96AX2 223 aa10.2□□□□□ -0.78
ZIC3-201ENST00000287538 TMUB1Q9BVT8 246 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms