RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 PSG8Q9UQ74 426 aa10.74□□□□□ -0.69
SCAF4-201ENST00000286835 USP9YO00507 2555 aaPredicted RBP10.74□□□□□ -0.69
SCAF4-201ENST00000286835 TOMM40O96008 361 aa10.73□□□□□ -0.69
SCAF4-201ENST00000286835 POU2AF1Q16633 256 aa10.73□□□□□ -0.69
SCAF4-201ENST00000286835 IGFL4Q6B9Z1 124 aa10.73□□□□□ -0.69
SCAF4-201ENST00000286835 ZNF414Q96IQ9 312 aa10.73□□□□□ -0.69
SCAF4-201ENST00000286835 UFC1Q9Y3C8 167 aa10.73□□□□□ -0.69
SCAF4-201ENST00000286835 ITGB1BP1O14713 200 aa10.73□□□□□ -0.69
SCAF4-201ENST00000286835 SCGB2A1O75556 95 aa10.73□□□□□ -0.69
SCAF4-201ENST00000286835 APOBEC3AP31941 199 aaPredicted RBP10.73□□□□□ -0.69
SCAF4-201ENST00000286835 ARL3P36405 182 aa10.73□□□□□ -0.69
SCAF4-201ENST00000286835 OCIAD2Q56VL3 154 aa10.73□□□□□ -0.69
SCAF4-201ENST00000286835 PPP1R27Q86WC6 154 aa10.73□□□□□ -0.69
SCAF4-201ENST00000286835 C22orf46C9J442 243 aa10.73□□□□□ -0.69
SCAF4-201ENST00000286835 PRSS57Q6UWY2 283 aa10.73□□□□□ -0.69
SCAF4-201ENST00000286835 AMN1Q8IY45 258 aa10.73□□□□□ -0.69
SCAF4-201ENST00000286835 MYO9AB2RTY4 2548 aa10.73□□□□□ -0.69
SCAF4-201ENST00000286835 LRRK2Q5S007 2527 aa10.73□□□□□ -0.69
SCAF4-201ENST00000286835 ABCA2Q9BZC7 2435 aa10.73□□□□□ -0.69
SCAF4-201ENST00000286835 Q86TA4 180 aa10.73□□□□□ -0.69
SCAF4-201ENST00000286835 OR5AN1Q8NGI8 311 aa10.73□□□□□ -0.69
SCAF4-201ENST00000286835 TMEM133Q9H2Q1 129 aa10.73□□□□□ -0.69
SCAF4-201ENST00000286835 OTORQ9NRC9 128 aa10.73□□□□□ -0.69
SCAF4-201ENST00000286835 SOX21Q9Y651 276 aaPredicted RBP10.73□□□□□ -0.69
SCAF4-201ENST00000286835 IGHV2-70DA0A0C4DH43 119 aa10.72□□□□□ -0.69
SCAF4-201ENST00000286835 MEF2CQ06413 473 aaPredicted RBP10.72□□□□□ -0.69
SCAF4-201ENST00000286835 TMEM213A2RRL7 107 aa10.72□□□□□ -0.69
SCAF4-201ENST00000286835 VWC2LB2RUY7 222 aa10.72□□□□□ -0.69
SCAF4-201ENST00000286835 S100A7AQ86SG5 101 aa10.72□□□□□ -0.69
SCAF4-201ENST00000286835 DKK4Q9UBT3 224 aa10.72□□□□□ -0.69
SCAF4-201ENST00000286835 LHBP01229 141 aa10.72□□□□□ -0.69
SCAF4-201ENST00000286835 WIPF2Q8TF74 440 aaPredicted RBP10.72□□□□□ -0.69
SCAF4-201ENST00000286835 NDFIP1Q9BT67 221 aa10.72□□□□□ -0.69
SCAF4-201ENST00000286835 PLP1P60201 277 aa10.71□□□□□ -0.69
SCAF4-201ENST00000286835 ZNF833PQ6ZTB9 187 aa10.71□□□□□ -0.69
SCAF4-201ENST00000286835 BOD1L1Q8NFC6 3051 aa10.71□□□□□ -0.69
SCAF4-201ENST00000286835 FAM231BA6NCW3 169 aa10.71□□□□□ -0.69
SCAF4-201ENST00000286835 B9A039 149 aa10.71□□□□□ -0.69
SCAF4-201ENST00000286835 CGB3P0DN86 165 aa10.71□□□□□ -0.69
SCAF4-201ENST00000286835 CGB7P0DN87 165 aa10.71□□□□□ -0.69
SCAF4-201ENST00000286835 KLF5Q13887 457 aaPredicted RBP10.71□□□□□ -0.69
SCAF4-201ENST00000286835 NPIPB5A8MRT5 1133 aa10.71□□□□□ -0.7
SCAF4-201ENST00000286835 LYZL1Q6UWQ5 148 aa10.71□□□□□ -0.7
SCAF4-201ENST00000286835 Q8TAT8 98 aa10.71□□□□□ -0.7
SCAF4-201ENST00000286835 IGHV3-49A0A0A0MS15 119 aa10.7□□□□□ -0.7
SCAF4-201ENST00000286835 IGHV3-66A0A0C4DH42 116 aa10.7□□□□□ -0.7
SCAF4-201ENST00000286835 KHDC1LQ5JSQ8 128 aa10.7□□□□□ -0.7
SCAF4-201ENST00000286835 RNASE6Q93091 150 aaKnown RBP10.7□□□□□ -0.7
SCAF4-201ENST00000286835 IGKV2-40A0A087WW87 121 aaPredicted RBP10.7□□□□□ -0.7
SCAF4-201ENST00000286835 IGKV2D-40P01614 121 aaPredicted RBP10.7□□□□□ -0.7
SCAF4-201ENST00000286835 EVI2AP22794 236 aa10.7□□□□□ -0.7
SCAF4-201ENST00000286835 IGFL3Q6UXB1 125 aa10.7□□□□□ -0.7
SCAF4-201ENST00000286835 C22orf34Q6ZV56 151 aa10.7□□□□□ -0.7
SCAF4-201ENST00000286835 TRGV9Q99603 122 aa10.7□□□□□ -0.7
SCAF4-201ENST00000286835 FASNP49327 2511 aaKnown RBP10.7□□□□□ -0.7
SCAF4-201ENST00000286835 TRAV8-6A0A0B4J262 113 aa10.7□□□□□ -0.7
SCAF4-201ENST00000286835 TAX1BP3O14907 124 aa10.7□□□□□ -0.7
SCAF4-201ENST00000286835 TMEM30BQ3MIR4 351 aa10.7□□□□□ -0.7
SCAF4-201ENST00000286835 ORMDL3Q8N138 153 aa10.7□□□□□ -0.7
SCAF4-201ENST00000286835 MBD6Q96DN6 1003 aa10.7□□□□□ -0.7
SCAF4-201ENST00000286835 FAM215AQ9Y5M1 114 aa10.7□□□□□ -0.7
SCAF4-201ENST00000286835 LOC105371242A0A075B767 164 aa10.69□□□□□ -0.7
SCAF4-201ENST00000286835 PPIAL4CA0A0B4J2A2 164 aa10.69□□□□□ -0.7
SCAF4-201ENST00000286835 LY6HO94772 140 aa10.69□□□□□ -0.7
SCAF4-201ENST00000286835 PPIAL4GP0DN37 164 aa10.69□□□□□ -0.7
SCAF4-201ENST00000286835 OR4A5Q8NH83 315 aa10.69□□□□□ -0.7
SCAF4-201ENST00000286835 C8orf49Q96NF6 230 aa10.69□□□□□ -0.7
SCAF4-201ENST00000286835 SPCS1Q9Y6A9 102 aa10.69□□□□□ -0.7
SCAF4-201ENST00000286835 IGHV1-8P0DP01 117 aa10.69□□□□□ -0.7
SCAF4-201ENST00000286835 RBX1P62877 108 aa10.69□□□□□ -0.7
SCAF4-201ENST00000286835 KLK15Q9H2R5 256 aa10.69□□□□□ -0.7
SCAF4-201ENST00000286835 IGKV1D-37A0A075B6S9 117 aa10.69□□□□□ -0.7
SCAF4-201ENST00000286835 ADIPOQQ15848 244 aa10.69□□□□□ -0.7
SCAF4-201ENST00000286835 ARHGAP32A7KAX9 2087 aa10.69□□□□□ -0.7
SCAF4-201ENST00000286835 CD5LO43866 347 aa10.69□□□□□ -0.7
SCAF4-201ENST00000286835 FABP2P12104 132 aa10.69□□□□□ -0.7
SCAF4-201ENST00000286835 GNLYP22749 145 aa10.69□□□□□ -0.7
SCAF4-201ENST00000286835 SEM1Q6ZVN7 128 aa10.69□□□□□ -0.7
SCAF4-201ENST00000286835 RNF125Q96EQ8 232 aa10.69□□□□□ -0.7
SCAF4-201ENST00000286835 SIGLEC9Q9Y336 463 aa10.69□□□□□ -0.7
SCAF4-201ENST00000286835 TMEM178BH3BS89 294 aa10.68□□□□□ -0.7
SCAF4-201ENST00000286835 CR1LQ2VPA4 569 aa10.68□□□□□ -0.7
SCAF4-201ENST00000286835 RUSC1-AS1Q66K80 236 aa10.68□□□□□ -0.7
SCAF4-201ENST00000286835 MS4A6AQ9H2W1 248 aa10.68□□□□□ -0.7
SCAF4-201ENST00000286835 IGLV3-9A0A075B6K5 115 aa10.68□□□□□ -0.7
SCAF4-201ENST00000286835 OR2K2Q8NGT1 345 aa10.68□□□□□ -0.7
SCAF4-201ENST00000286835 TMEM160Q9NX00 188 aa10.68□□□□□ -0.7
SCAF4-201ENST00000286835 SAP30O75446 220 aa10.68□□□□□ -0.7
SCAF4-201ENST00000286835 CEACAM3P40198 252 aa10.68□□□□□ -0.7
SCAF4-201ENST00000286835 ATP5J2P56134 94 aa10.68□□□□□ -0.7
SCAF4-201ENST00000286835 RPL11P62913 178 aaKnown RBP10.68□□□□□ -0.7
SCAF4-201ENST00000286835 SETD2Q9BYW2 2564 aaPredicted RBP10.67□□□□□ -0.7
SCAF4-201ENST00000286835 GATA4P43694 442 aa10.67□□□□□ -0.7
SCAF4-201ENST00000286835 CDKN1BP46527 198 aa10.67□□□□□ -0.7
SCAF4-201ENST00000286835 IFI27L1Q96BM0 104 aa10.67□□□□□ -0.7
SCAF4-201ENST00000286835 KIR3DS1Q14943 382 aa10.67□□□□□ -0.7
SCAF4-201ENST00000286835 Q71RC1 249 aaPredicted RBP10.67□□□□□ -0.7
SCAF4-201ENST00000286835 DEFB125Q8N687 156 aa10.67□□□□□ -0.7
SCAF4-201ENST00000286835 RABAC1Q9UI14 185 aa10.67□□□□□ -0.7
SCAF4-201ENST00000286835 LTAP01374 205 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms