RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 C16orf82Q7Z2V1 217 aa8.56□□□□□ -1.04
GGPS1-201ENST00000282841 LRRC75A-AS1Q8N1F1 130 aa8.56□□□□□ -1.04
GGPS1-201ENST00000282841 LINC00479Q96M42 142 aa8.56□□□□□ -1.04
GGPS1-201ENST00000282841 SMIM7Q9BQ49 75 aa8.56□□□□□ -1.04
GGPS1-201ENST00000282841 PARLQ9H300 379 aa8.56□□□□□ -1.04
GGPS1-201ENST00000282841 URGCP-MRPS24S4R325 110 aa8.56□□□□□ -1.04
GGPS1-201ENST00000282841 ANK3Q12955 4377 aaKnown RBP8.56□□□□□ -1.04
GGPS1-201ENST00000282841 TRAV41A0A0B4J266 112 aa8.56□□□□□ -1.04
GGPS1-201ENST00000282841 C8orf88P0DMB2 117 aa8.56□□□□□ -1.04
GGPS1-201ENST00000282841 RANP62826 216 aaKnown RBP8.56□□□□□ -1.04
GGPS1-201ENST00000282841 SUMO1P63165 101 aaKnown RBP8.56□□□□□ -1.04
GGPS1-201ENST00000282841 TRGV9Q99603 122 aa8.56□□□□□ -1.04
GGPS1-201ENST00000282841 TECRQ9NZ01 308 aaKnown RBP8.56□□□□□ -1.04
GGPS1-201ENST00000282841 FN1P02751 2386 aaKnown RBP8.56□□□□□ -1.04
GGPS1-201ENST00000282841 HYPMO75409 117 aa8.55□□□□□ -1.04
GGPS1-201ENST00000282841 TRBV12-3P01733 135 aa8.55□□□□□ -1.04
GGPS1-201ENST00000282841 TRGC2P03986 189 aa8.55□□□□□ -1.04
GGPS1-201ENST00000282841 GATA3P23771 443 aa8.55□□□□□ -1.04
GGPS1-201ENST00000282841 ADMP35318 185 aa8.55□□□□□ -1.04
GGPS1-201ENST00000282841 SAMD13Q5VXD3 122 aa8.55□□□□□ -1.04
GGPS1-201ENST00000282841 C17orf77Q96MU5 243 aa8.55□□□□□ -1.04
GGPS1-201ENST00000282841 NIPSNAP3BQ9BS92 247 aa8.55□□□□□ -1.04
GGPS1-201ENST00000282841 FCGR2BP31994 310 aaPredicted RBP8.55□□□□□ -1.04
GGPS1-201ENST00000282841 MFAP4P55083 255 aa8.55□□□□□ -1.04
GGPS1-201ENST00000282841 ADIRFQ15847 76 aa8.55□□□□□ -1.04
GGPS1-201ENST00000282841 Q6ZVH6 145 aa8.55□□□□□ -1.04
GGPS1-201ENST00000282841 ASCL2Q99929 193 aa8.55□□□□□ -1.04
GGPS1-201ENST00000282841 A0A1B0GW15 77 aa8.55□□□□□ -1.04
GGPS1-201ENST00000282841 GGTLC3B5MD39 225 aa8.55□□□□□ -1.04
GGPS1-201ENST00000282841 CTSGP08311 255 aa8.55□□□□□ -1.04
GGPS1-201ENST00000282841 TRGC1P0CF51 173 aa8.55□□□□□ -1.04
GGPS1-201ENST00000282841 CRYBB3P26998 211 aa8.55□□□□□ -1.04
GGPS1-201ENST00000282841 IER3P46695 156 aa8.55□□□□□ -1.04
GGPS1-201ENST00000282841 ZNF343Q6P1L6 599 aa8.55□□□□□ -1.04
GGPS1-201ENST00000282841 ORAOV1Q8WV07 137 aa8.55□□□□□ -1.04
GGPS1-201ENST00000282841 PAXXQ9BUH6 204 aa8.55□□□□□ -1.04
GGPS1-201ENST00000282841 TRGV3P03979 118 aa8.54□□□□□ -1.04
GGPS1-201ENST00000282841 HERV-K104P63124 156 aa8.54□□□□□ -1.04
GGPS1-201ENST00000282841 GNG5P63218 68 aa8.54□□□□□ -1.04
GGPS1-201ENST00000282841 MRPL52Q86TS9 123 aaKnown RBP8.54□□□□□ -1.04
GGPS1-201ENST00000282841 ZNF491Q8N8L2 437 aa8.54□□□□□ -1.04
GGPS1-201ENST00000282841 FAM110DQ8TAY7 271 aaPredicted RBP8.54□□□□□ -1.04
GGPS1-201ENST00000282841 SRSF8Q9BRL6 282 aaKnown RBP8.54□□□□□ -1.04
GGPS1-201ENST00000282841 MANBALQ9NQG1 85 aa8.54□□□□□ -1.04
GGPS1-201ENST00000282841 TRBV20OR9-2A0A075B6H5 130 aa8.54□□□□□ -1.04
GGPS1-201ENST00000282841 K7ERU9 68 aa8.54□□□□□ -1.04
GGPS1-201ENST00000282841 AMBPP02760 352 aa8.54□□□□□ -1.04
GGPS1-201ENST00000282841 RPL15P61313 204 aaKnown RBP8.54□□□□□ -1.04
GGPS1-201ENST00000282841 NHLRC2Q8NBF2 726 aa8.54□□□□□ -1.04
GGPS1-201ENST00000282841 MBD6Q96DN6 1003 aa8.54□□□□□ -1.04
GGPS1-201ENST00000282841 CCDC140Q96MF4 163 aa8.54□□□□□ -1.04
GGPS1-201ENST00000282841 TRAV34A0A0B4J273 112 aa8.53□□□□□ -1.04
GGPS1-201ENST00000282841 BRI3O95415 125 aa8.53□□□□□ -1.04
GGPS1-201ENST00000282841 TPPP2P59282 170 aa8.53□□□□□ -1.04
GGPS1-201ENST00000282841 C1orf194Q5T5A4 169 aa8.53□□□□□ -1.04
GGPS1-201ENST00000282841 NECAP1Q8NC96 275 aa8.53□□□□□ -1.04
GGPS1-201ENST00000282841 RNF125Q96EQ8 232 aa8.53□□□□□ -1.04
GGPS1-201ENST00000282841 YPEL4Q96NS1 127 aa8.53□□□□□ -1.04
GGPS1-201ENST00000282841 SLC25A39Q9BZJ4 359 aaPredicted RBP8.53□□□□□ -1.04
GGPS1-201ENST00000282841 HIGD1AQ9Y241 93 aa8.53□□□□□ -1.04
GGPS1-201ENST00000282841 SCGB1D1O95968 90 aa8.53□□□□□ -1.04
GGPS1-201ENST00000282841 GCGP01275 180 aa8.53□□□□□ -1.04
GGPS1-201ENST00000282841 IQCJQ1A5X6 159 aa8.53□□□□□ -1.04
GGPS1-201ENST00000282841 IGFL4Q6B9Z1 124 aa8.53□□□□□ -1.04
GGPS1-201ENST00000282841 LINC01551Q86U37 167 aa8.53□□□□□ -1.04
GGPS1-201ENST00000282841 SIGLECL1Q8N7X8 197 aa8.53□□□□□ -1.04
GGPS1-201ENST00000282841 OR1L4Q8NGR5 311 aa8.53□□□□□ -1.04
GGPS1-201ENST00000282841 FXYD5Q96DB9 178 aa8.53□□□□□ -1.04
GGPS1-201ENST00000282841 TVP23CQ96ET8 276 aa8.53□□□□□ -1.04
GGPS1-201ENST00000282841 ATP6V0BQ99437 205 aa8.53□□□□□ -1.04
GGPS1-201ENST00000282841 THYN1Q9P016 225 aa8.53□□□□□ -1.04
GGPS1-201ENST00000282841 KIR2DL5BA0A0G2JN68 375 aa8.52□□□□□ -1.04
GGPS1-201ENST00000282841 KIR2DL5BA0A0G2JPC4 375 aa8.52□□□□□ -1.04
GGPS1-201ENST00000282841 TAS2R45P59539 299 aa8.52□□□□□ -1.04
GGPS1-201ENST00000282841 PRR27Q6MZM9 219 aa8.52□□□□□ -1.04
GGPS1-201ENST00000282841 BOD1L2Q8IYS8 172 aa8.52□□□□□ -1.04
GGPS1-201ENST00000282841 KIR2DL5AQ8N109 375 aa8.52□□□□□ -1.04
GGPS1-201ENST00000282841 J3QLI3 93 aa8.52□□□□□ -1.05
GGPS1-201ENST00000282841 RAB9AP51151 201 aa8.52□□□□□ -1.05
GGPS1-201ENST00000282841 EXOC3-AS1Q8N2X6 119 aa8.52□□□□□ -1.05
GGPS1-201ENST00000282841 FRZBQ92765 325 aa8.52□□□□□ -1.05
GGPS1-201ENST00000282841 YAE1D1Q9NRH1 226 aa8.52□□□□□ -1.05
GGPS1-201ENST00000282841 NSD1Q96L73 2696 aaPredicted RBP8.52□□□□□ -1.05
GGPS1-201ENST00000282841 SORL1Q92673 2214 aa8.52□□□□□ -1.05
GGPS1-201ENST00000282841 PQLC2Q6ZP29 291 aa8.51□□□□□ -1.05
GGPS1-201ENST00000282841 ZNF502Q8TBZ5 544 aa8.51□□□□□ -1.05
GGPS1-201ENST00000282841 IGHG2P01859 326 aa8.51□□□□□ -1.05
GGPS1-201ENST00000282841 APOHP02749 345 aaPredicted RBP8.51□□□□□ -1.05
GGPS1-201ENST00000282841 CXCL1P09341 107 aa8.51□□□□□ -1.05
GGPS1-201ENST00000282841 TMEM241Q24JQ0 296 aa8.51□□□□□ -1.05
GGPS1-201ENST00000282841 SMDT1Q9H4I9 107 aa8.51□□□□□ -1.05
GGPS1-201ENST00000282841 SDF2L1Q9HCN8 221 aa8.51□□□□□ -1.05
GGPS1-201ENST00000282841 SMPXQ9UHP9 88 aa8.51□□□□□ -1.05
GGPS1-201ENST00000282841 PITPNC1Q9UKF7 332 aa8.51□□□□□ -1.05
GGPS1-201ENST00000282841 FSHBP01225 129 aa8.51□□□□□ -1.05
GGPS1-201ENST00000282841 SRP14P37108 136 aaKnown RBP8.51□□□□□ -1.05
GGPS1-201ENST00000282841 RPL23P62829 140 aaKnown RBP8.51□□□□□ -1.05
GGPS1-201ENST00000282841 SRSF2Q01130 221 aaKnown RBP8.51□□□□□ -1.05
GGPS1-201ENST00000282841 Q8WTZ3 238 aa8.51□□□□□ -1.05
GGPS1-201ENST00000282841 ZNF414Q96IQ9 312 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms