RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 DUX3Q96PT4 197 aa9.04□□□□□ -0.96
SSRP1-201ENST00000278412 THYN1Q9P016 225 aa9.04□□□□□ -0.96
SSRP1-201ENST00000278412 VAX2Q9UIW0 290 aa9.04□□□□□ -0.96
SSRP1-201ENST00000278412 TRRAPQ9Y4A5 3859 aa9.03□□□□□ -0.96
SSRP1-201ENST00000278412 TGOLN2O43493 480 aa9.03□□□□□ -0.96
SSRP1-201ENST00000278412 TOMM40O96008 361 aa9.03□□□□□ -0.96
SSRP1-201ENST00000278412 GCGP01275 180 aa9.03□□□□□ -0.96
SSRP1-201ENST00000278412 RAB9AP51151 201 aa9.03□□□□□ -0.96
SSRP1-201ENST00000278412 SELENOTP62341 195 aa9.03□□□□□ -0.96
SSRP1-201ENST00000278412 GNG5P63218 68 aa9.03□□□□□ -0.96
SSRP1-201ENST00000278412 SERTAD4Q9NUC0 356 aa9.03□□□□□ -0.96
SSRP1-201ENST00000278412 TECRQ9NZ01 308 aaKnown RBP9.03□□□□□ -0.96
SSRP1-201ENST00000278412 MRPL27Q9P0M9 148 aaKnown RBP9.03□□□□□ -0.96
SSRP1-201ENST00000278412 TRBV20OR9-2A0A075B6H5 130 aa9.03□□□□□ -0.96
SSRP1-201ENST00000278412 CLPSL1A2RUU4 121 aa9.03□□□□□ -0.96
SSRP1-201ENST00000278412 SLC17A3O00476 420 aa9.03□□□□□ -0.96
SSRP1-201ENST00000278412 PSMB3P49720 205 aa9.03□□□□□ -0.96
SSRP1-201ENST00000278412 RANP62826 216 aaKnown RBP9.03□□□□□ -0.96
SSRP1-201ENST00000278412 RBX1P62877 108 aa9.03□□□□□ -0.96
SSRP1-201ENST00000278412 DEFB136Q30KP8 78 aa9.03□□□□□ -0.96
SSRP1-201ENST00000278412 SOHLH1Q5JUK2 328 aa9.03□□□□□ -0.96
SSRP1-201ENST00000278412 OR1L6Q8NGR2 347 aa9.03□□□□□ -0.96
SSRP1-201ENST00000278412 FRZBQ92765 325 aa9.03□□□□□ -0.96
SSRP1-201ENST00000278412 SMDT1Q9H4I9 107 aa9.03□□□□□ -0.96
SSRP1-201ENST00000278412 HIGD1AQ9Y241 93 aa9.03□□□□□ -0.96
SSRP1-201ENST00000278412 WI2-2373I1.2A0A1W2PRP0 233 aa9.02□□□□□ -0.97
SSRP1-201ENST00000278412 NDUFB4O95168 129 aa9.02□□□□□ -0.97
SSRP1-201ENST00000278412 GP9P14770 177 aa9.02□□□□□ -0.97
SSRP1-201ENST00000278412 ERVFC1-1P60608 527 aa9.02□□□□□ -0.97
SSRP1-201ENST00000278412 PAXXQ9BUH6 204 aa9.02□□□□□ -0.97
SSRP1-201ENST00000278412 DMRTA1Q5VZB9 504 aa9.02□□□□□ -0.97
SSRP1-201ENST00000278412 ZNF343Q6P1L6 599 aa9.02□□□□□ -0.97
SSRP1-201ENST00000278412 Q6ZSV7 163 aa9.02□□□□□ -0.97
SSRP1-201ENST00000278412 TMEM183AQ8IXX5 376 aa9.02□□□□□ -0.97
SSRP1-201ENST00000278412 ZFAND3Q9H8U3 227 aa9.02□□□□□ -0.97
SSRP1-201ENST00000278412 ZNF586Q9NXT0 402 aa9.02□□□□□ -0.97
SSRP1-201ENST00000278412 ZNF727A8MUV8 499 aa9.01□□□□□ -0.97
SSRP1-201ENST00000278412 AMBPP02760 352 aa9.01□□□□□ -0.97
SSRP1-201ENST00000278412 PSMB8P28062 276 aa9.01□□□□□ -0.97
SSRP1-201ENST00000278412 SUMO1P63165 101 aaKnown RBP9.01□□□□□ -0.97
SSRP1-201ENST00000278412 TCTEX1D4Q5JR98 221 aa9.01□□□□□ -0.97
SSRP1-201ENST00000278412 EXOC3-AS1Q8N2X6 119 aa9.01□□□□□ -0.97
SSRP1-201ENST00000278412 OR4X2Q8NGF9 303 aa9.01□□□□□ -0.97
SSRP1-201ENST00000278412 VN1R17PQ8TDU5 208 aa9.01□□□□□ -0.97
SSRP1-201ENST00000278412 PARLQ9H300 379 aa9.01□□□□□ -0.97
SSRP1-201ENST00000278412 RPH3ALQ9UNE2 315 aa9.01□□□□□ -0.97
SSRP1-201ENST00000278412 TGIF2-C20orf24A0A0A6YYL0 155 aa9.01□□□□□ -0.97
SSRP1-201ENST00000278412 CRYBB3P26998 211 aa9.01□□□□□ -0.97
SSRP1-201ENST00000278412 OR1L4Q8NGR5 311 aa9.01□□□□□ -0.97
SSRP1-201ENST00000278412 EEF1AKMT3Q96AZ1 226 aa9.01□□□□□ -0.97
SSRP1-201ENST00000278412 TRAV34A0A0B4J273 112 aa9□□□□□ -0.97
SSRP1-201ENST00000278412 BMPR1BO00238 502 aa9□□□□□ -0.97
SSRP1-201ENST00000278412 PLP1P60201 277 aa9□□□□□ -0.97
SSRP1-201ENST00000278412 YPEL3P61236 119 aaPredicted RBP9□□□□□ -0.97
SSRP1-201ENST00000278412 ELOVL1Q9BW60 279 aa9□□□□□ -0.97
SSRP1-201ENST00000278412 PRSS22Q9GZN4 317 aa9□□□□□ -0.97
SSRP1-201ENST00000278412 NPFFR1Q9GZQ6 430 aa9□□□□□ -0.97
SSRP1-201ENST00000278412 HLA-DMBP28068 263 aa9□□□□□ -0.97
SSRP1-201ENST00000278412 ARL3P36405 182 aa9□□□□□ -0.97
SSRP1-201ENST00000278412 SHANK2-AS3Q9BTD1 123 aa9□□□□□ -0.97
SSRP1-201ENST00000278412 STAB1Q9NY15 2570 aa9□□□□□ -0.97
SSRP1-201ENST00000278412 H3BRN7 92 aa8.99□□□□□ -0.97
SSRP1-201ENST00000278412 IGHG4P01861 327 aa8.99□□□□□ -0.97
SSRP1-201ENST00000278412 SRD5A1P18405 259 aa8.99□□□□□ -0.97
SSRP1-201ENST00000278412 TAGLN2P37802 199 aaKnown RBP8.99□□□□□ -0.97
SSRP1-201ENST00000278412 KLK9Q2XQG4 91 aa8.99□□□□□ -0.97
SSRP1-201ENST00000278412 NHLRC2Q8NBF2 726 aa8.99□□□□□ -0.97
SSRP1-201ENST00000278412 KLK9Q9UKQ9 250 aa8.99□□□□□ -0.97
SSRP1-201ENST00000278412 FBN1P35555 2871 aaKnown RBP8.99□□□□□ -0.97
SSRP1-201ENST00000278412 PQLC2Q6ZP29 291 aa8.99□□□□□ -0.97
SSRP1-201ENST00000278412 MRPL32Q9BYC8 188 aaKnown RBP8.99□□□□□ -0.97
SSRP1-201ENST00000278412 MANBALQ9NQG1 85 aa8.99□□□□□ -0.97
SSRP1-201ENST00000278412 CHTOPQ9Y3Y2 248 aaKnown RBP8.99□□□□□ -0.97
SSRP1-201ENST00000278412 SMAD5-AS1Q9Y6J3 95 aa8.99□□□□□ -0.97
SSRP1-201ENST00000278412 KIR2DL5BA0A0G2JN68 375 aa8.99□□□□□ -0.97
SSRP1-201ENST00000278412 KIR2DL5BA0A0G2JPC4 375 aa8.99□□□□□ -0.97
SSRP1-201ENST00000278412 TMEM238LA0A1B0GVL6 79 aa8.99□□□□□ -0.97
SSRP1-201ENST00000278412 ZNF320A2RRD8 509 aa8.99□□□□□ -0.97
SSRP1-201ENST00000278412 ZNF705GA8MUZ8 300 aaPredicted RBP8.99□□□□□ -0.97
SSRP1-201ENST00000278412 MRPS12O15235 138 aaKnown RBP8.99□□□□□ -0.97
SSRP1-201ENST00000278412 IFNA1P01562 189 aa8.99□□□□□ -0.97
SSRP1-201ENST00000278412 CDKN1BP46527 198 aa8.99□□□□□ -0.97
SSRP1-201ENST00000278412 KIR2DL5AQ8N109 375 aa8.99□□□□□ -0.97
SSRP1-201ENST00000278412 SMIM7Q9BQ49 75 aa8.99□□□□□ -0.97
SSRP1-201ENST00000278412 A0A1W2PPQ1 181 aa8.98□□□□□ -0.97
SSRP1-201ENST00000278412 M0R3E3 92 aa8.98□□□□□ -0.97
SSRP1-201ENST00000278412 NBEAP1P0C6P0 100 aa8.98□□□□□ -0.97
SSRP1-201ENST00000278412 TAS2R45P59539 299 aa8.98□□□□□ -0.97
SSRP1-201ENST00000278412 TM4SF20Q53R12 229 aa8.98□□□□□ -0.97
SSRP1-201ENST00000278412 COA6Q5JTJ3 125 aaKnown RBP8.98□□□□□ -0.97
SSRP1-201ENST00000278412 C1orf194Q5T5A4 169 aa8.98□□□□□ -0.97
SSRP1-201ENST00000278412 IGKV3-7A0A075B6H7 116 aa8.98□□□□□ -0.97
SSRP1-201ENST00000278412 TRBV7-1A0A0A6YYK4 115 aa8.98□□□□□ -0.97
SSRP1-201ENST00000278412 FAM223BA6NKX1 122 aa8.98□□□□□ -0.97
SSRP1-201ENST00000278412 HAX1O00165 279 aa8.98□□□□□ -0.97
SSRP1-201ENST00000278412 FAM223AQ8IWN6 122 aa8.98□□□□□ -0.97
SSRP1-201ENST00000278412 FAM210BQ96KR6 192 aa8.98□□□□□ -0.97
SSRP1-201ENST00000278412 TRAV30A0A087WSZ9 112 aa8.97□□□□□ -0.97
SSRP1-201ENST00000278412 TRAV8-1A0A0A6YYK1 113 aa8.97□□□□□ -0.97
SSRP1-201ENST00000278412 A0A1W2PRX2 142 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms