RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 MED13LQ71F56 2210 aa8.22□□□□□ -1.09
UPF3B-201ENST00000276201 OR2T8A6NH00 312 aa8.22□□□□□ -1.09
UPF3B-201ENST00000276201 LY6HO94772 140 aa8.22□□□□□ -1.09
UPF3B-201ENST00000276201 MOSP00540 346 aa8.22□□□□□ -1.09
UPF3B-201ENST00000276201 P01737 135 aa8.22□□□□□ -1.09
UPF3B-201ENST00000276201 PRR27Q6MZM9 219 aa8.22□□□□□ -1.09
UPF3B-201ENST00000276201 UFSP1Q6NVU6 142 aa8.22□□□□□ -1.09
UPF3B-201ENST00000276201 ITLN1Q8WWA0 313 aa8.22□□□□□ -1.09
UPF3B-201ENST00000276201 ZNF469Q96JG9 3925 aaPredicted RBP8.22□□□□□ -1.09
UPF3B-201ENST00000276201 TNCP24821 2201 aa8.22□□□□□ -1.09
UPF3B-201ENST00000276201 IGLV3-9A0A075B6K5 115 aa8.21□□□□□ -1.09
UPF3B-201ENST00000276201 hDV102S1A0JD36 115 aa8.21□□□□□ -1.09
UPF3B-201ENST00000276201 SIVA1O15304 175 aa8.21□□□□□ -1.09
UPF3B-201ENST00000276201 SLC25A5P05141 298 aaKnown RBP8.21□□□□□ -1.09
UPF3B-201ENST00000276201 EFNA4P52798 201 aa8.21□□□□□ -1.09
UPF3B-201ENST00000276201 MLANAQ16655 118 aa8.21□□□□□ -1.09
UPF3B-201ENST00000276201 UTF1Q5T230 341 aa8.21□□□□□ -1.09
UPF3B-201ENST00000276201 AMMECR1LQ6DCA0 310 aa8.21□□□□□ -1.09
UPF3B-201ENST00000276201 VPS25Q9BRG1 176 aa8.21□□□□□ -1.09
UPF3B-201ENST00000276201 NPFFR1Q9GZQ6 430 aa8.21□□□□□ -1.09
UPF3B-201ENST00000276201 DYNLRB1Q9NP97 96 aa8.21□□□□□ -1.09
UPF3B-201ENST00000276201 IGHV3OR15-7A0A075B7D8 119 aa8.21□□□□□ -1.1
UPF3B-201ENST00000276201 H3BRM9 83 aa8.21□□□□□ -1.1
UPF3B-201ENST00000276201 M0QZ24 198 aa8.21□□□□□ -1.1
UPF3B-201ENST00000276201 RNF151Q2KHN1 245 aa8.21□□□□□ -1.1
UPF3B-201ENST00000276201 PSMG4Q5JS54 123 aa8.21□□□□□ -1.1
UPF3B-201ENST00000276201 ZNF788Q6ZQV5 615 aa8.21□□□□□ -1.1
UPF3B-201ENST00000276201 LINC00173Q6ZV60 143 aa8.21□□□□□ -1.1
UPF3B-201ENST00000276201 C2orf91Q6ZV80 131 aa8.21□□□□□ -1.1
UPF3B-201ENST00000276201 CIARTQ8N365 385 aaPredicted RBP8.21□□□□□ -1.1
UPF3B-201ENST00000276201 GAFA1Q96PS6 74 aa8.21□□□□□ -1.1
UPF3B-201ENST00000276201 FNDC4Q9H6D8 234 aaPredicted RBP8.21□□□□□ -1.1
UPF3B-201ENST00000276201 RNF7Q9UBF6 113 aa8.21□□□□□ -1.1
UPF3B-201ENST00000276201 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.2□□□□□ -1.1
UPF3B-201ENST00000276201 SH2D7A6NKC9 451 aaPredicted RBP8.2□□□□□ -1.1
UPF3B-201ENST00000276201 IGKV1-16P04430 117 aa8.2□□□□□ -1.1
UPF3B-201ENST00000276201 MEF2CQ06413 473 aaPredicted RBP8.2□□□□□ -1.1
UPF3B-201ENST00000276201 MOGAT3Q86VF5 341 aa8.2□□□□□ -1.1
UPF3B-201ENST00000276201 LINC00311Q8N616 119 aa8.2□□□□□ -1.1
UPF3B-201ENST00000276201 NEU4Q8WWR8 484 aaPredicted RBP8.2□□□□□ -1.1
UPF3B-201ENST00000276201 LEAP2Q969E1 77 aa8.2□□□□□ -1.1
UPF3B-201ENST00000276201 OTORQ9NRC9 128 aa8.2□□□□□ -1.1
UPF3B-201ENST00000276201 TMEM14CQ9P0S9 112 aa8.2□□□□□ -1.1
UPF3B-201ENST00000276201 LINC00312Q9Y6C7 94 aa8.2□□□□□ -1.1
UPF3B-201ENST00000276201 MTORP42345 2549 aa8.2□□□□□ -1.1
UPF3B-201ENST00000276201 GAGE12BA1L429 117 aa8.2□□□□□ -1.1
UPF3B-201ENST00000276201 PGPA6NDG6 321 aa8.2□□□□□ -1.1
UPF3B-201ENST00000276201 CGB1A6NKQ9 187 aa8.2□□□□□ -1.1
UPF3B-201ENST00000276201 CHEK1O14757 476 aa8.2□□□□□ -1.1
UPF3B-201ENST00000276201 TCRAP04437 139 aa8.2□□□□□ -1.1
UPF3B-201ENST00000276201 NBEAP1P0C6P0 100 aa8.2□□□□□ -1.1
UPF3B-201ENST00000276201 GP9P14770 177 aa8.2□□□□□ -1.1
UPF3B-201ENST00000276201 TMEM97Q5BJF2 176 aa8.2□□□□□ -1.1
UPF3B-201ENST00000276201 TEX36Q5VZQ5 186 aa8.2□□□□□ -1.1
UPF3B-201ENST00000276201 Q6AWC8 147 aa8.2□□□□□ -1.1
UPF3B-201ENST00000276201 GTF2H5Q6ZYL4 71 aa8.2□□□□□ -1.1
UPF3B-201ENST00000276201 LINC00305Q7Z4B0 112 aa8.2□□□□□ -1.1
UPF3B-201ENST00000276201 BPIFA4PQ86YQ2 179 aa8.2□□□□□ -1.1
UPF3B-201ENST00000276201 OR10W1Q8NGF6 305 aa8.2□□□□□ -1.1
UPF3B-201ENST00000276201 IGHV4-30-2A0A087WSY4 118 aa8.19□□□□□ -1.1
UPF3B-201ENST00000276201 TRAV8-6A0A0B4J262 113 aa8.19□□□□□ -1.1
UPF3B-201ENST00000276201 hADV38S2A0JD32 116 aa8.19□□□□□ -1.1
UPF3B-201ENST00000276201 C9orf118A6NHY6 69 aa8.19□□□□□ -1.1
UPF3B-201ENST00000276201 IGHV3-7P01780 117 aa8.19□□□□□ -1.1
UPF3B-201ENST00000276201 FGF6P10767 208 aa8.19□□□□□ -1.1
UPF3B-201ENST00000276201 GNG5P63218 68 aa8.19□□□□□ -1.1
UPF3B-201ENST00000276201 SSBP2P81877 361 aaPredicted RBP8.19□□□□□ -1.1
UPF3B-201ENST00000276201 RIGQ13278 110 aa8.19□□□□□ -1.1
UPF3B-201ENST00000276201 LINC00322Q6ZN03 302 aaPredicted RBP8.19□□□□□ -1.1
UPF3B-201ENST00000276201 NPIPB3Q92617 1050 aa8.19□□□□□ -1.1
UPF3B-201ENST00000276201 ST6GALNAC6Q969X2 333 aa8.19□□□□□ -1.1
UPF3B-201ENST00000276201 DAZAP1Q96EP5 407 aaKnown RBP8.19□□□□□ -1.1
UPF3B-201ENST00000276201 ZNF747Q9BV97 191 aa8.19□□□□□ -1.1
UPF3B-201ENST00000276201 RAB1BQ9H0U4 201 aa8.19□□□□□ -1.1
UPF3B-201ENST00000276201 CSN1S1P47710 185 aa8.19□□□□□ -1.1
UPF3B-201ENST00000276201 WT1-ASQ06250 92 aa8.19□□□□□ -1.1
UPF3B-201ENST00000276201 CLEC2AQ6UVW9 174 aa8.19□□□□□ -1.1
UPF3B-201ENST00000276201 Q86TA4 180 aa8.19□□□□□ -1.1
UPF3B-201ENST00000276201 OR4C13Q8NGP0 309 aa8.19□□□□□ -1.1
UPF3B-201ENST00000276201 OR9G4Q8NGQ1 327 aa8.19□□□□□ -1.1
UPF3B-201ENST00000276201 PGLYRP4Q96LB8 373 aa8.19□□□□□ -1.1
UPF3B-201ENST00000276201 HARBI1Q96MB7 349 aa8.19□□□□□ -1.1
UPF3B-201ENST00000276201 A6NDN8 102 aa8.18□□□□□ -1.1
UPF3B-201ENST00000276201 ZNF137PP52743 207 aa8.18□□□□□ -1.1
UPF3B-201ENST00000276201 DSCR9P59020 149 aa8.18□□□□□ -1.1
UPF3B-201ENST00000276201 LGALS9BQ3B8N2 356 aa8.18□□□□□ -1.1
UPF3B-201ENST00000276201 LGALS9CQ6DKI2 356 aa8.18□□□□□ -1.1
UPF3B-201ENST00000276201 ZNF493Q6ZR52 646 aa8.18□□□□□ -1.1
UPF3B-201ENST00000276201 TEX45Q8NA69 505 aa8.18□□□□□ -1.1
UPF3B-201ENST00000276201 TMEM116Q8NCL8 245 aa8.18□□□□□ -1.1
UPF3B-201ENST00000276201 PIFOQ8TCI5 191 aa8.18□□□□□ -1.1
UPF3B-201ENST00000276201 C10orf105Q8TEF2 133 aa8.18□□□□□ -1.1
UPF3B-201ENST00000276201 ZANQ9Y493 2812 aa8.18□□□□□ -1.1
UPF3B-201ENST00000276201 C7orf71A4D174 169 aa8.18□□□□□ -1.1
UPF3B-201ENST00000276201 CBY3A6NI87 242 aa8.18□□□□□ -1.1
UPF3B-201ENST00000276201 RNF223E7ERA6 249 aa8.18□□□□□ -1.1
UPF3B-201ENST00000276201 SMAD7O15105 426 aaKnown RBP8.18□□□□□ -1.1
UPF3B-201ENST00000276201 IGLV2-23P01705 113 aa8.18□□□□□ -1.1
UPF3B-201ENST00000276201 OR10AG1Q8NH19 301 aa8.18□□□□□ -1.1
UPF3B-201ENST00000276201 C8orf46Q8TAG6 207 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms