RNA–Protein interactions for RNA: ENST00000274721.7

GFRA3-201, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GFRA3, Length 2,039 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-201ENST00000274721 SGK494Q96LW2 274 aa16.49■□□□□ 0.23
GFRA3-201ENST00000274721 SMAD5-AS1Q9Y6J3 95 aa16.49■□□□□ 0.23
GFRA3-201ENST00000274721 RPL15P61313 204 aaKnown RBP16.48■□□□□ 0.23
GFRA3-201ENST00000274721 WFDC11Q8NEX6 87 aa16.48■□□□□ 0.23
GFRA3-201ENST00000274721 KLK15Q9H2R5 256 aa16.48■□□□□ 0.23
GFRA3-201ENST00000274721 ZNF469Q96JG9 3925 aaPredicted RBP16.48■□□□□ 0.23
GFRA3-201ENST00000274721 TRBV6-1A0A0K0K1D8 114 aa16.47■□□□□ 0.23
GFRA3-201ENST00000274721 ZNF320A2RRD8 509 aa16.47■□□□□ 0.23
GFRA3-201ENST00000274721 UBE2CO00762 179 aa16.47■□□□□ 0.23
GFRA3-201ENST00000274721 RPEL1Q2QD12 228 aa16.47■□□□□ 0.23
GFRA3-201ENST00000274721 TRGC1P0CF51 173 aa16.46■□□□□ 0.23
GFRA3-201ENST00000274721 VPREB3Q9UKI3 123 aa16.46■□□□□ 0.23
GFRA3-201ENST00000274721 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.46■□□□□ 0.23
GFRA3-201ENST00000274721 ZNF253O75346 499 aa16.46■□□□□ 0.23
GFRA3-201ENST00000274721 PSG9Q00887 426 aa16.46■□□□□ 0.23
GFRA3-201ENST00000274721 SMUG1Q53HV7 270 aa16.46■□□□□ 0.23
GFRA3-201ENST00000274721 GOLT1AQ6ZVE7 132 aa16.46■□□□□ 0.23
GFRA3-201ENST00000274721 U3KQE9 123 aa16.46■□□□□ 0.23
GFRA3-201ENST00000274721 CCDC168Q8NDH2 2452 aa16.46■□□□□ 0.23
GFRA3-201ENST00000274721 CIARTQ8N365 385 aaPredicted RBP16.45■□□□□ 0.22
GFRA3-201ENST00000274721 ITPR3Q14573 2671 aa16.45■□□□□ 0.22
GFRA3-201ENST00000274721 TRAV8-1A0A0A6YYK1 113 aa16.45■□□□□ 0.22
GFRA3-201ENST00000274721 PF4V1P10720 104 aa16.45■□□□□ 0.22
GFRA3-201ENST00000274721 ARL3P36405 182 aa16.45■□□□□ 0.22
GFRA3-201ENST00000274721 FABP9Q0Z7S8 132 aa16.45■□□□□ 0.22
GFRA3-201ENST00000274721 C1orf194Q5T5A4 169 aa16.45■□□□□ 0.22
GFRA3-201ENST00000274721 TMEM75Q8N9X5 138 aa16.45■□□□□ 0.22
GFRA3-201ENST00000274721 NUDT10Q8NFP7 164 aa16.45■□□□□ 0.22
GFRA3-201ENST00000274721 NUDT11Q96G61 164 aa16.45■□□□□ 0.22
GFRA3-201ENST00000274721 AAMDCQ9H7C9 122 aa16.45■□□□□ 0.22
GFRA3-201ENST00000274721 DIRC3C9JPN6 131 aa16.44■□□□□ 0.22
GFRA3-201ENST00000274721 ACTL10Q5JWF8 245 aa16.44■□□□□ 0.22
GFRA3-201ENST00000274721 Q86TA4 180 aa16.44■□□□□ 0.22
GFRA3-201ENST00000274721 ARL6IP6Q8N6S5 226 aa16.44■□□□□ 0.22
GFRA3-201ENST00000274721 SMIM27A0A1W2PRY6 76 aa16.43■□□□□ 0.22
GFRA3-201ENST00000274721 ZNF705GA8MUZ8 300 aaPredicted RBP16.43■□□□□ 0.22
GFRA3-201ENST00000274721 M0R3E3 92 aa16.43■□□□□ 0.22
GFRA3-201ENST00000274721 TRBV12-3P01733 135 aa16.43■□□□□ 0.22
GFRA3-201ENST00000274721 TMEM183AQ8IXX5 376 aa16.43■□□□□ 0.22
GFRA3-201ENST00000274721 METTL26Q96S19 204 aa16.43■□□□□ 0.22
GFRA3-201ENST00000274721 MXRA5Q9NR99 2828 aa16.43■□□□□ 0.22
GFRA3-201ENST00000274721 A0A087X0K7 114 aa16.43■□□□□ 0.22
GFRA3-201ENST00000274721 A0A0G2JLM5 398 aa16.43■□□□□ 0.22
GFRA3-201ENST00000274721 IGHG4P01861 327 aa16.43■□□□□ 0.22
GFRA3-201ENST00000274721 TMEM95Q3KNT9 176 aa16.43■□□□□ 0.22
GFRA3-201ENST00000274721 APOHP02749 345 aaPredicted RBP16.42■□□□□ 0.22
GFRA3-201ENST00000274721 NDUFA4O00483 81 aa16.41■□□□□ 0.22
GFRA3-201ENST00000274721 PSMB8P28062 276 aa16.41■□□□□ 0.22
GFRA3-201ENST00000274721 PSG3Q16557 428 aa16.41■□□□□ 0.22
GFRA3-201ENST00000274721 LINC00322Q6ZN03 302 aaPredicted RBP16.41■□□□□ 0.22
GFRA3-201ENST00000274721 PRSS22Q9GZN4 317 aa16.41■□□□□ 0.22
GFRA3-201ENST00000274721 SERTAD4Q9NUC0 356 aa16.41■□□□□ 0.22
GFRA3-201ENST00000274721 ZNF492Q9P255 531 aa16.41■□□□□ 0.22
GFRA3-201ENST00000274721 PDZD2O15018 2839 aa16.41■□□□□ 0.22
GFRA3-201ENST00000274721 TLN2Q9Y4G6 2542 aa16.41■□□□□ 0.22
GFRA3-201ENST00000274721 C19orf71A6NCJ1 209 aa16.41■□□□□ 0.22
GFRA3-201ENST00000274721 K7EQM0 130 aa16.41■□□□□ 0.22
GFRA3-201ENST00000274721 GATCO43716 136 aaKnown RBP16.41■□□□□ 0.22
GFRA3-201ENST00000274721 HOXA5P20719 270 aa16.41■□□□□ 0.22
GFRA3-201ENST00000274721 NDUFA6P56556 154 aa16.41■□□□□ 0.22
GFRA3-201ENST00000274721 PRR27Q6MZM9 219 aa16.41■□□□□ 0.22
GFRA3-201ENST00000274721 OR4X2Q8NGF9 303 aa16.41■□□□□ 0.22
GFRA3-201ENST00000274721 ZNF331Q9NQX6 463 aaPredicted RBP16.41■□□□□ 0.22
GFRA3-201ENST00000274721 SERTM2A0A1B0GWG4 89 aa16.4■□□□□ 0.22
GFRA3-201ENST00000274721 HOXA3O43365 443 aaPredicted RBP16.4■□□□□ 0.22
GFRA3-201ENST00000274721 IGHV3-11P01762 117 aa16.4■□□□□ 0.22
GFRA3-201ENST00000274721 LCNL1Q6ZST4 164 aa16.4■□□□□ 0.22
GFRA3-201ENST00000274721 PRNTQ86SH4 94 aa16.4■□□□□ 0.22
GFRA3-201ENST00000274721 ZFP30Q9Y2G7 519 aa16.4■□□□□ 0.22
GFRA3-201ENST00000274721 TMEM89A2RUT3 159 aa16.4■□□□□ 0.22
GFRA3-201ENST00000274721 CA1P00915 261 aaPredicted RBP16.4■□□□□ 0.22
GFRA3-201ENST00000274721 GRAMD2BQ96HH9 432 aa16.4■□□□□ 0.22
GFRA3-201ENST00000274721 PSG8Q9UQ74 426 aa16.4■□□□□ 0.22
GFRA3-201ENST00000274721 ZNF785A8K8V0 405 aa16.38■□□□□ 0.21
GFRA3-201ENST00000274721 ZNF207O43670 478 aaKnown RBP16.38■□□□□ 0.21
GFRA3-201ENST00000274721 CSN1S1P47710 185 aa16.38■□□□□ 0.21
GFRA3-201ENST00000274721 UNQ9165/PRO28630Q6UXU0 137 aa16.38■□□□□ 0.21
GFRA3-201ENST00000274721 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.38■□□□□ 0.21
GFRA3-201ENST00000274721 TRAPPC1Q9Y5R8 145 aa16.38■□□□□ 0.21
GFRA3-201ENST00000274721 IGHV3-66A0A0C4DH42 116 aa16.38■□□□□ 0.21
GFRA3-201ENST00000274721 FAM209BQ5JX69 171 aa16.38■□□□□ 0.21
GFRA3-201ENST00000274721 Q71RC1 249 aaPredicted RBP16.38■□□□□ 0.21
GFRA3-201ENST00000274721 FOXC2Q99958 501 aa16.38■□□□□ 0.21
GFRA3-201ENST00000274721 ZNF702PQ9H963 129 aa16.38■□□□□ 0.21
GFRA3-201ENST00000274721 ITPR2Q14571 2701 aa16.37■□□□□ 0.21
GFRA3-201ENST00000274721 IGHV3OR16-13A0A075B7E8 117 aa16.37■□□□□ 0.21
GFRA3-201ENST00000274721 IGHV3-74A0A0B4J1X5 117 aa16.37■□□□□ 0.21
GFRA3-201ENST00000274721 AKR1D1P51857 326 aa16.37■□□□□ 0.21
GFRA3-201ENST00000274721 TSKUQ8WUA8 353 aa16.37■□□□□ 0.21
GFRA3-201ENST00000274721 FRMD6-AS1P0C7T7 363 aa16.36■□□□□ 0.21
GFRA3-201ENST00000274721 TCL1AP56279 114 aa16.36■□□□□ 0.21
GFRA3-201ENST00000274721 C16orf54Q6UWD8 224 aa16.36■□□□□ 0.21
GFRA3-201ENST00000274721 NPFFR1Q9GZQ6 430 aa16.36■□□□□ 0.21
GFRA3-201ENST00000274721 UNC79Q9P2D8 2635 aa16.36■□□□□ 0.21
GFRA3-201ENST00000274721 IGHV3-49A0A0A0MS15 119 aa16.36■□□□□ 0.21
GFRA3-201ENST00000274721 IZUMO1RA6ND01 250 aa16.36■□□□□ 0.21
GFRA3-201ENST00000274721 NPIPB6E9PJ23 425 aa16.36■□□□□ 0.21
GFRA3-201ENST00000274721 CDX1P47902 265 aaPredicted RBP16.36■□□□□ 0.21
GFRA3-201ENST00000274721 CT83Q5H943 113 aa16.36■□□□□ 0.21
GFRA3-201ENST00000274721 TEX29Q8N6K0 151 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms