RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 SNRPCP09234 159 aaKnown RBP12.88□□□□□ -0.35
SKP2-201ENST00000274254 H2AFB1P0C5Y9 115 aa12.88□□□□□ -0.35
SKP2-201ENST00000274254 NBEAP1P0C6P0 100 aa12.88□□□□□ -0.35
SKP2-201ENST00000274254 GCHFRP30047 84 aa12.88□□□□□ -0.35
SKP2-201ENST00000274254 FGF8P55075 233 aaPredicted RBP12.88□□□□□ -0.35
SKP2-201ENST00000274254 UBE2L3P68036 154 aaKnown RBP12.88□□□□□ -0.35
SKP2-201ENST00000274254 GUK1Q16774 197 aa12.88□□□□□ -0.35
SKP2-201ENST00000274254 SUN5Q8TC36 379 aa12.88□□□□□ -0.35
SKP2-201ENST00000274254 SFT2D1Q8WV19 159 aa12.88□□□□□ -0.35
SKP2-201ENST00000274254 SAT2Q96F10 170 aaPredicted RBP12.88□□□□□ -0.35
SKP2-201ENST00000274254 TRBV19A0A075B6N1 114 aa12.88□□□□□ -0.35
SKP2-201ENST00000274254 TRAV1-1A0A0B4J248 108 aa12.88□□□□□ -0.35
SKP2-201ENST00000274254 DNASE2O00115 360 aaPredicted RBP12.88□□□□□ -0.35
SKP2-201ENST00000274254 TFPI2P48307 235 aa12.88□□□□□ -0.35
SKP2-201ENST00000274254 IFITM2Q01629 132 aa12.88□□□□□ -0.35
SKP2-201ENST00000274254 PDE6HQ13956 83 aa12.88□□□□□ -0.35
SKP2-201ENST00000274254 GUCA2BQ16661 112 aa12.88□□□□□ -0.35
SKP2-201ENST00000274254 BEAN1Q3B7T3 259 aa12.88□□□□□ -0.35
SKP2-201ENST00000274254 OR4C46A6NHA9 309 aa12.87□□□□□ -0.35
SKP2-201ENST00000274254 H3BTX0 84 aa12.87□□□□□ -0.35
SKP2-201ENST00000274254 ZNF253O75346 499 aa12.87□□□□□ -0.35
SKP2-201ENST00000274254 SAMD13Q5VXD3 122 aa12.87□□□□□ -0.35
SKP2-201ENST00000274254 WFDC3Q8IUB2 231 aa12.87□□□□□ -0.35
SKP2-201ENST00000274254 UBQLN2Q9UHD9 624 aa12.87□□□□□ -0.35
SKP2-201ENST00000274254 SLC17A3O00476 420 aa12.86□□□□□ -0.35
SKP2-201ENST00000274254 NDUFB4O95168 129 aa12.86□□□□□ -0.35
SKP2-201ENST00000274254 FAM24BQ8N5W8 94 aa12.86□□□□□ -0.35
SKP2-201ENST00000274254 LRRC20Q8TCA0 184 aa12.86□□□□□ -0.35
SKP2-201ENST00000274254 BLNKQ8WV28 456 aa12.86□□□□□ -0.35
SKP2-201ENST00000274254 ZNF331Q9NQX6 463 aaPredicted RBP12.86□□□□□ -0.35
SKP2-201ENST00000274254 TMEM167BQ9NRX6 74 aa12.86□□□□□ -0.35
SKP2-201ENST00000274254 NOTCH1P46531 2555 aa12.86□□□□□ -0.35
SKP2-201ENST00000274254 TRAV8-2A0A0B4J237 113 aa12.85□□□□□ -0.35
SKP2-201ENST00000274254 ISLRO14498 428 aa12.85□□□□□ -0.35
SKP2-201ENST00000274254 KRTAP10-11P60412 298 aa12.85□□□□□ -0.35
SKP2-201ENST00000274254 BLOC1S1P78537 153 aa12.85□□□□□ -0.35
SKP2-201ENST00000274254 SLC50A1Q9BRV3 221 aa12.85□□□□□ -0.35
SKP2-201ENST00000274254 TMPRSS5Q9H3S3 457 aa12.85□□□□□ -0.35
SKP2-201ENST00000274254 NBEAL1Q6ZS30 2694 aa12.84□□□□□ -0.35
SKP2-201ENST00000274254 HBE1P02100 147 aa12.84□□□□□ -0.35
SKP2-201ENST00000274254 PSMB3P49720 205 aa12.84□□□□□ -0.35
SKP2-201ENST00000274254 KPRPQ5T749 579 aaPredicted RBP12.84□□□□□ -0.35
SKP2-201ENST00000274254 LYPD6BQ8NI32 183 aa12.84□□□□□ -0.35
SKP2-201ENST00000274254 C16orf92Q96LL3 132 aa12.84□□□□□ -0.35
SKP2-201ENST00000274254 ZMAT5Q9UDW3 170 aaKnown RBP12.84□□□□□ -0.35
SKP2-201ENST00000274254 A0A1B0GV50 99 aa12.83□□□□□ -0.35
SKP2-201ENST00000274254 IQCF2Q8IXL9 164 aa12.83□□□□□ -0.35
SKP2-201ENST00000274254 TEX46H3BTG2 121 aa12.83□□□□□ -0.36
SKP2-201ENST00000274254 ZNF688P0C7X2 276 aa12.83□□□□□ -0.36
SKP2-201ENST00000274254 ID1P41134 155 aa12.83□□□□□ -0.36
SKP2-201ENST00000274254 SNRPD3P62318 126 aaKnown RBP12.83□□□□□ -0.36
SKP2-201ENST00000274254 CCL20P78556 96 aa12.83□□□□□ -0.36
SKP2-201ENST00000274254 PSG9Q00887 426 aa12.83□□□□□ -0.36
SKP2-201ENST00000274254 IGFL4Q6B9Z1 124 aa12.83□□□□□ -0.36
SKP2-201ENST00000274254 ZNF767PQ75MW2 155 aa12.83□□□□□ -0.36
SKP2-201ENST00000274254 LYPD1Q8N2G4 141 aa12.83□□□□□ -0.36
SKP2-201ENST00000274254 FAM110AQ9BQ89 295 aa12.83□□□□□ -0.36
SKP2-201ENST00000274254 NMBP08949 121 aa12.82□□□□□ -0.36
SKP2-201ENST00000274254 CD7P09564 240 aa12.82□□□□□ -0.36
SKP2-201ENST00000274254 RANP62826 216 aaKnown RBP12.82□□□□□ -0.36
SKP2-201ENST00000274254 ODF3L2Q3SX64 289 aa12.82□□□□□ -0.36
SKP2-201ENST00000274254 C20orf173Q96LM9 149 aa12.82□□□□□ -0.36
SKP2-201ENST00000274254 C19orf73Q9NVV2 129 aa12.82□□□□□ -0.36
SKP2-201ENST00000274254 CLEC5AQ9NY25 188 aa12.82□□□□□ -0.36
SKP2-201ENST00000274254 HLA-DMBP28068 263 aa12.81□□□□□ -0.36
SKP2-201ENST00000274254 EXOC3-AS1Q8N2X6 119 aa12.81□□□□□ -0.36
SKP2-201ENST00000274254 RNF182Q8N6D2 247 aa12.81□□□□□ -0.36
SKP2-201ENST00000274254 Q9H3A6 140 aa12.81□□□□□ -0.36
SKP2-201ENST00000274254 MAP6D1Q9H9H5 199 aa12.81□□□□□ -0.36
SKP2-201ENST00000274254 A0A1W2PRE2 83 aa12.8□□□□□ -0.36
SKP2-201ENST00000274254 CMC4P56277 68 aaPredicted RBP12.8□□□□□ -0.36
SKP2-201ENST00000274254 CD81P60033 236 aa12.8□□□□□ -0.36
SKP2-201ENST00000274254 PMS2P11Q13670 270 aa12.8□□□□□ -0.36
SKP2-201ENST00000274254 PSMG4Q5JS54 123 aa12.8□□□□□ -0.36
SKP2-201ENST00000274254 GTSCR1Q86UQ5 136 aa12.8□□□□□ -0.36
SKP2-201ENST00000274254 PCNPQ8WW12 178 aaKnown RBP12.8□□□□□ -0.36
SKP2-201ENST00000274254 AAMDCQ9H7C9 122 aa12.8□□□□□ -0.36
SKP2-201ENST00000274254 ARL2-SNX15V9GYD0 113 aa12.8□□□□□ -0.36
SKP2-201ENST00000274254 FAM74A7A6NL05 159 aa12.79□□□□□ -0.36
SKP2-201ENST00000274254 PPT1P50897 306 aa12.79□□□□□ -0.36
SKP2-201ENST00000274254 DEFB131AP59861 70 aa12.79□□□□□ -0.36
SKP2-201ENST00000274254 ICAM4Q14773 271 aa12.79□□□□□ -0.36
SKP2-201ENST00000274254 PSG3Q16557 428 aa12.79□□□□□ -0.36
SKP2-201ENST00000274254 Q8N1Y9 231 aa12.79□□□□□ -0.36
SKP2-201ENST00000274254 MRPL53Q96EL3 112 aaKnown RBP12.79□□□□□ -0.36
SKP2-201ENST00000274254 LINC00052Q96N35 136 aa12.79□□□□□ -0.36
SKP2-201ENST00000274254 PRR25Q96S07 402 aa12.79□□□□□ -0.36
SKP2-201ENST00000274254 OTORQ9NRC9 128 aa12.79□□□□□ -0.36
SKP2-201ENST00000274254 YTHDF2Q9Y5A9 579 aaKnown RBP12.79□□□□□ -0.36
SKP2-201ENST00000274254 GGTLC3B5MD39 225 aa12.78□□□□□ -0.36
SKP2-201ENST00000274254 UBE2G2P60604 165 aa12.78□□□□□ -0.36
SKP2-201ENST00000274254 PRELID1Q9Y255 219 aa12.78□□□□□ -0.36
SKP2-201ENST00000274254 PGPA6NDG6 321 aa12.78□□□□□ -0.36
SKP2-201ENST00000274254 OR11H12B2RN74 326 aa12.78□□□□□ -0.36
SKP2-201ENST00000274254 M0R3E3 92 aa12.78□□□□□ -0.36
SKP2-201ENST00000274254 RGS13O14921 159 aa12.78□□□□□ -0.36
SKP2-201ENST00000274254 MANBALQ9NQG1 85 aa12.78□□□□□ -0.36
SKP2-201ENST00000274254 GNG13Q9P2W3 67 aa12.78□□□□□ -0.36
SKP2-201ENST00000274254 PAGE4O60829 102 aa12.77□□□□□ -0.37
SKP2-201ENST00000274254 ZNF738Q8NE65 137 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms