RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 VAMP1P23763 118 aa6.22□□□□□ -1.41
TPM3-201ENST00000271850 TMBIM6P55061 237 aa6.22□□□□□ -1.41
TPM3-201ENST00000271850 FAM3BP58499 235 aaPredicted RBP6.22□□□□□ -1.41
TPM3-201ENST00000271850 PLP1P60201 277 aa6.22□□□□□ -1.41
TPM3-201ENST00000271850 POLR2GP62487 172 aaKnown RBP eCLIP6.22□□□□□ -1.41
TPM3-201ENST00000271850 RAB11AP62491 216 aa6.22□□□□□ -1.41
TPM3-201ENST00000271850 SPANXN5Q5MJ07 72 aa6.22□□□□□ -1.41
TPM3-201ENST00000271850 MORN5Q5VZ52 161 aa6.22□□□□□ -1.41
TPM3-201ENST00000271850 CYP2G1PQ6ZSU1 146 aa6.22□□□□□ -1.41
TPM3-201ENST00000271850 TMEM144Q7Z5S9 345 aa6.22□□□□□ -1.41
TPM3-201ENST00000271850 C6orf223Q8N319 242 aa6.22□□□□□ -1.41
TPM3-201ENST00000271850 C15orf53Q8NAA6 179 aa6.22□□□□□ -1.41
TPM3-201ENST00000271850 BPIFCQ8NFQ6 507 aa6.22□□□□□ -1.41
TPM3-201ENST00000271850 RNASE8Q8TDE3 154 aaKnown RBP6.22□□□□□ -1.41
TPM3-201ENST00000271850 SCGB3A2Q96PL1 93 aa6.22□□□□□ -1.41
TPM3-201ENST00000271850 RABL2AQ9UBK7 228 aaPredicted RBP6.22□□□□□ -1.41
TPM3-201ENST00000271850 PFDN2Q9UHV9 154 aa6.22□□□□□ -1.41
TPM3-201ENST00000271850 TMEM238LA0A1B0GVL6 79 aa6.21□□□□□ -1.42
TPM3-201ENST00000271850 PRAC2D3DTV9 90 aa6.21□□□□□ -1.42
TPM3-201ENST00000271850 F5H768 121 aa6.21□□□□□ -1.42
TPM3-201ENST00000271850 DUSP14O95147 198 aaKnown RBP6.21□□□□□ -1.42
TPM3-201ENST00000271850 NUDT3O95989 172 aa6.21□□□□□ -1.42
TPM3-201ENST00000271850 CFDP00746 253 aaPredicted RBP6.21□□□□□ -1.42
TPM3-201ENST00000271850 FABP1P07148 127 aa6.21□□□□□ -1.42
TPM3-201ENST00000271850 SNRPCP09234 159 aaKnown RBP6.21□□□□□ -1.42
TPM3-201ENST00000271850 KRTAP10-2P60368 255 aa6.21□□□□□ -1.42
TPM3-201ENST00000271850 FGL1Q08830 312 aa6.21□□□□□ -1.42
TPM3-201ENST00000271850 ARL16Q0P5N6 197 aa6.21□□□□□ -1.42
TPM3-201ENST00000271850 SAMD13Q5VXD3 122 aa6.21□□□□□ -1.42
TPM3-201ENST00000271850 LINC00612Q8N6U2 182 aa6.21□□□□□ -1.42
TPM3-201ENST00000271850 OR8A1Q8NGG7 326 aa6.21□□□□□ -1.42
TPM3-201ENST00000271850 BCL7BQ9BQE9 202 aa6.21□□□□□ -1.42
TPM3-201ENST00000271850 TMEM208Q9BTX3 173 aa6.21□□□□□ -1.42
TPM3-201ENST00000271850 TMEM147Q9BVK8 224 aa6.21□□□□□ -1.42
TPM3-201ENST00000271850 TMED3Q9Y3Q3 217 aa6.21□□□□□ -1.42
TPM3-201ENST00000271850 SLC17A3O00476 420 aa6.2□□□□□ -1.42
TPM3-201ENST00000271850 LINC00869P0C866 280 aa6.2□□□□□ -1.42
TPM3-201ENST00000271850 TAS2R60P59551 318 aa6.2□□□□□ -1.42
TPM3-201ENST00000271850 HIST1H1AQ02539 215 aaPredicted RBP6.2□□□□□ -1.42
TPM3-201ENST00000271850 AKR1C1Q04828 323 aa6.2□□□□□ -1.42
TPM3-201ENST00000271850 PSG3Q16557 428 aa6.2□□□□□ -1.42
TPM3-201ENST00000271850 SOHLH1Q5JUK2 328 aa6.2□□□□□ -1.42
TPM3-201ENST00000271850 TMEM14EPQ6UXP3 125 aa6.2□□□□□ -1.42
TPM3-201ENST00000271850 TOMM5Q8N4H5 51 aa6.2□□□□□ -1.42
TPM3-201ENST00000271850 MAPKAPK5-AS1Q8N8E1 139 aa6.2□□□□□ -1.42
TPM3-201ENST00000271850 ZNF738Q8NE65 137 aa6.2□□□□□ -1.42
TPM3-201ENST00000271850 MCFD2Q8NI22 146 aa6.2□□□□□ -1.42
TPM3-201ENST00000271850 GPR82Q96P67 336 aa6.2□□□□□ -1.42
TPM3-201ENST00000271850 CIB3Q96Q77 187 aaPredicted RBP6.2□□□□□ -1.42
TPM3-201ENST00000271850 KRTAP9-8Q9BYQ0 159 aa6.2□□□□□ -1.42
TPM3-201ENST00000271850 FLVCR2Q9UPI3 526 aa6.2□□□□□ -1.42
TPM3-201ENST00000271850 HIGD1AQ9Y241 93 aa6.2□□□□□ -1.42
TPM3-201ENST00000271850 MYCBP2O75592 4640 aa6.2□□□□□ -1.42
TPM3-201ENST00000271850 VPS13BQ7Z7G8 4022 aa6.2□□□□□ -1.42
TPM3-201ENST00000271850 LINC00854A0A1B0GVQ3 168 aa6.19□□□□□ -1.42
TPM3-201ENST00000271850 C9orf170A2RU37 121 aa6.19□□□□□ -1.42
TPM3-201ENST00000271850 CBY3A6NI87 242 aa6.19□□□□□ -1.42
TPM3-201ENST00000271850 H3BTX0 84 aa6.19□□□□□ -1.42
TPM3-201ENST00000271850 K7EPK0 472 aa6.19□□□□□ -1.42
TPM3-201ENST00000271850 MED6O75586 246 aa6.19□□□□□ -1.42
TPM3-201ENST00000271850 IL5P05113 134 aa6.19□□□□□ -1.42
TPM3-201ENST00000271850 ATP5G1P05496 136 aa6.19□□□□□ -1.42
TPM3-201ENST00000271850 BTCP35070 178 aa6.19□□□□□ -1.42
TPM3-201ENST00000271850 ATP5G3P48201 142 aa6.19□□□□□ -1.42
TPM3-201ENST00000271850 RRAS2P62070 204 aaPredicted RBP6.19□□□□□ -1.42
TPM3-201ENST00000271850 SLC38A11Q08AI6 406 aa6.19□□□□□ -1.42
TPM3-201ENST00000271850 GFI1BQ5VTD9 330 aa6.19□□□□□ -1.42
TPM3-201ENST00000271850 SSX7Q7RTT5 188 aa6.19□□□□□ -1.42
TPM3-201ENST00000271850 CCDC190Q86UF4 302 aa6.19□□□□□ -1.42
TPM3-201ENST00000271850 LINC01587Q99440 93 aa6.19□□□□□ -1.42
TPM3-201ENST00000271850 SLC25A21Q9BQT8 299 aaPredicted RBP6.19□□□□□ -1.42
TPM3-201ENST00000271850 ATG101Q9BSB4 218 aa6.19□□□□□ -1.42
TPM3-201ENST00000271850 NOP10Q9NPE3 64 aaKnown RBP6.19□□□□□ -1.42
TPM3-201ENST00000271850 ZNF331Q9NQX6 463 aaPredicted RBP6.19□□□□□ -1.42
TPM3-201ENST00000271850 PSENENQ9NZ42 101 aa6.19□□□□□ -1.42
TPM3-201ENST00000271850 RCL1Q9Y2P8 373 aaKnown RBP6.19□□□□□ -1.42
TPM3-201ENST00000271850 STRAPQ9Y3F4 350 aaKnown RBP6.19□□□□□ -1.42
TPM3-201ENST00000271850 SMCO3A2RU48 225 aa6.18□□□□□ -1.42
TPM3-201ENST00000271850 H3BS24 57 aa6.18□□□□□ -1.42
TPM3-201ENST00000271850 SSSCA1O60232 199 aa6.18□□□□□ -1.42
TPM3-201ENST00000271850 HYPMO75409 117 aa6.18□□□□□ -1.42
TPM3-201ENST00000271850 METTL15P1P0C7V9 234 aa6.18□□□□□ -1.42
TPM3-201ENST00000271850 HTN1P15515 57 aa6.18□□□□□ -1.42
TPM3-201ENST00000271850 RPL7P18124 248 aaKnown RBP6.18□□□□□ -1.42
TPM3-201ENST00000271850 BAK1Q16611 211 aa6.18□□□□□ -1.42
TPM3-201ENST00000271850 ESRGQ1W209 222 aa6.18□□□□□ -1.42
TPM3-201ENST00000271850 PYDC2Q56P42 97 aa6.18□□□□□ -1.42
TPM3-201ENST00000271850 SPATA12Q7Z6I5 190 aa6.18□□□□□ -1.42
TPM3-201ENST00000271850 Q8N1X5 172 aa6.18□□□□□ -1.42
TPM3-201ENST00000271850 TMEM37Q8WXS4 190 aa6.18□□□□□ -1.42
TPM3-201ENST00000271850 RPUSD4Q96CM3 377 aaKnown RBP6.18□□□□□ -1.42
TPM3-201ENST00000271850 C16orf74Q96GX8 76 aa6.18□□□□□ -1.42
TPM3-201ENST00000271850 SDHCQ99643 169 aaPredicted RBP6.18□□□□□ -1.42
TPM3-201ENST00000271850 SRRQ9GZT4 340 aa6.18□□□□□ -1.42
TPM3-201ENST00000271850 ARV1Q9H2C2 271 aa6.18□□□□□ -1.42
TPM3-201ENST00000271850 TRAV26-1A0A087WT03 109 aa6.17□□□□□ -1.42
TPM3-201ENST00000271850 A0A0J9YY99 117 aa6.17□□□□□ -1.42
TPM3-201ENST00000271850 H3BQ15 152 aa6.17□□□□□ -1.42
TPM3-201ENST00000271850 ZNF701M0R085 212 aaPredicted RBP6.17□□□□□ -1.42
TPM3-201ENST00000271850 OR5G3P0C626 314 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms