RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 C5orf64Q2M2E5 130 aa6.39□□□□□ -1.39
USP3-201ENST00000268049 AMELYQ99218 206 aa6.39□□□□□ -1.39
USP3-201ENST00000268049 SMPXQ9UHP9 88 aa6.39□□□□□ -1.39
USP3-201ENST00000268049 TCF19Q9Y242 345 aa6.39□□□□□ -1.39
USP3-201ENST00000268049 IGHV3OR16-13A0A075B7E8 117 aa6.39□□□□□ -1.39
USP3-201ENST00000268049 IGHV3-49A0A0A0MS15 119 aa6.39□□□□□ -1.39
USP3-201ENST00000268049 IGHV3-74A0A0B4J1X5 117 aa6.39□□□□□ -1.39
USP3-201ENST00000268049 C22orf46C9J442 243 aa6.39□□□□□ -1.39
USP3-201ENST00000268049 CCL24O00175 119 aa6.39□□□□□ -1.39
USP3-201ENST00000268049 EFNA2O43921 213 aa6.39□□□□□ -1.39
USP3-201ENST00000268049 RPL36AP83881 106 aaKnown RBP6.39□□□□□ -1.39
USP3-201ENST00000268049 RPL36ALQ969Q0 106 aaKnown RBP6.39□□□□□ -1.39
USP3-201ENST00000268049 SPATA25Q9BR10 227 aa6.39□□□□□ -1.39
USP3-201ENST00000268049 RBMY1BA6NDE4 496 aaKnown RBP6.38□□□□□ -1.39
USP3-201ENST00000268049 RBMY1EA6NEQ0 496 aaKnown RBP6.38□□□□□ -1.39
USP3-201ENST00000268049 C9orf118A6NHY6 69 aa6.38□□□□□ -1.39
USP3-201ENST00000268049 FOXI3A8MTJ6 420 aaPredicted RBP6.38□□□□□ -1.39
USP3-201ENST00000268049 H3BTX0 84 aa6.38□□□□□ -1.39
USP3-201ENST00000268049 K7EP34 96 aa6.38□□□□□ -1.39
USP3-201ENST00000268049 LGALS1P09382 135 aaKnown RBP6.38□□□□□ -1.39
USP3-201ENST00000268049 RBMY1DP0C7P1 496 aaKnown RBP6.38□□□□□ -1.39
USP3-201ENST00000268049 RBMY1A1P0DJD3 496 aaKnown RBP6.38□□□□□ -1.39
USP3-201ENST00000268049 RBMY1CP0DJD4 496 aa6.38□□□□□ -1.39
USP3-201ENST00000268049 PRR31Q5SQ13 230 aa6.38□□□□□ -1.39
USP3-201ENST00000268049 MORN3Q6PF18 240 aaPredicted RBP6.38□□□□□ -1.39
USP3-201ENST00000268049 RNF144BQ7Z419 303 aa6.38□□□□□ -1.39
USP3-201ENST00000268049 DAZ1Q9NQZ3 744 aaKnown RBP6.38□□□□□ -1.39
USP3-201ENST00000268049 ALPK2Q86TB3 2170 aa6.38□□□□□ -1.39
USP3-201ENST00000268049 SRRM5B3KS81 715 aa6.38□□□□□ -1.39
USP3-201ENST00000268049 F8W1H4 67 aa6.38□□□□□ -1.39
USP3-201ENST00000268049 IGFL2Q6UWQ7 119 aa6.38□□□□□ -1.39
USP3-201ENST00000268049 NDUFA11Q86Y39 141 aa6.38□□□□□ -1.39
USP3-201ENST00000268049 PPDPFLQ8WWR9 84 aa6.38□□□□□ -1.39
USP3-201ENST00000268049 FMC1Q96HJ9 113 aa6.38□□□□□ -1.39
USP3-201ENST00000268049 IGHV3-66A0A0C4DH42 116 aa6.38□□□□□ -1.39
USP3-201ENST00000268049 H3BUA1 57 aa6.38□□□□□ -1.39
USP3-201ENST00000268049 SLC25A20O43772 301 aa6.38□□□□□ -1.39
USP3-201ENST00000268049 PLNP26678 52 aa6.38□□□□□ -1.39
USP3-201ENST00000268049 OCC1Q8TAD7 63 aa6.38□□□□□ -1.39
USP3-201ENST00000268049 ZNF837Q96EG3 531 aaPredicted RBP6.38□□□□□ -1.39
USP3-201ENST00000268049 Q96M66 194 aa6.38□□□□□ -1.39
USP3-201ENST00000268049 GGTLC3B5MD39 225 aa6.38□□□□□ -1.39
USP3-201ENST00000268049 FCN3O75636 299 aa6.38□□□□□ -1.39
USP3-201ENST00000268049 IGHV2-5P01817 119 aa6.38□□□□□ -1.39
USP3-201ENST00000268049 ETDBQ3ZM63 59 aa6.38□□□□□ -1.39
USP3-201ENST00000268049 ZNF329Q86UD4 541 aa6.38□□□□□ -1.39
USP3-201ENST00000268049 IGHV1-3A0A0C4DH29 117 aa6.37□□□□□ -1.39
USP3-201ENST00000268049 B3GALT5-AS1P59052 145 aa6.37□□□□□ -1.39
USP3-201ENST00000268049 PMVKQ15126 192 aa6.37□□□□□ -1.39
USP3-201ENST00000268049 POU2AF1Q16633 256 aa6.37□□□□□ -1.39
USP3-201ENST00000268049 S100A7L2Q5SY68 101 aa6.37□□□□□ -1.39
USP3-201ENST00000268049 KLHDC3Q9BQ90 382 aa6.37□□□□□ -1.39
USP3-201ENST00000268049 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.37□□□□□ -1.39
USP3-201ENST00000268049 TRAV24A0A0B4J272 114 aa6.37□□□□□ -1.39
USP3-201ENST00000268049 SYS1-DBNDD2H3BUS1 97 aa6.37□□□□□ -1.39
USP3-201ENST00000268049 K7EM74 188 aa6.37□□□□□ -1.39
USP3-201ENST00000268049 NAPSAO96009 420 aa6.37□□□□□ -1.39
USP3-201ENST00000268049 SYNJ2BPP57105 145 aa6.37□□□□□ -1.39
USP3-201ENST00000268049 ADORA2A-AS1P86434 159 aa6.37□□□□□ -1.39
USP3-201ENST00000268049 ATP5L2Q7Z4Y8 100 aa6.37□□□□□ -1.39
USP3-201ENST00000268049 CYTL1Q9NRR1 136 aa6.37□□□□□ -1.39
USP3-201ENST00000268049 SPTBN1Q01082 2364 aaKnown RBP6.37□□□□□ -1.39
USP3-201ENST00000268049 TRGV1A0A0A0MS02 117 aa6.37□□□□□ -1.39
USP3-201ENST00000268049 F8WEM9 126 aa6.37□□□□□ -1.39
USP3-201ENST00000268049 M0R2P5 195 aa6.37□□□□□ -1.39
USP3-201ENST00000268049 DEFB112Q30KQ8 113 aa6.37□□□□□ -1.39
USP3-201ENST00000268049 LINC01559Q495D7 138 aa6.37□□□□□ -1.39
USP3-201ENST00000268049 RASL11AQ6T310 242 aa6.37□□□□□ -1.39
USP3-201ENST00000268049 SH2D6Q7Z4S9 175 aa6.37□□□□□ -1.39
USP3-201ENST00000268049 CACNG8Q8WXS5 425 aa6.37□□□□□ -1.39
USP3-201ENST00000268049 SPRY4Q9C004 299 aa6.37□□□□□ -1.39
USP3-201ENST00000268049 LINC00527Q9UJ94 153 aa6.37□□□□□ -1.39
USP3-201ENST00000268049 MED12Q93074 2177 aa6.37□□□□□ -1.39
USP3-201ENST00000268049 TRBV20-1A0A075B6N2 111 aa6.37□□□□□ -1.39
USP3-201ENST00000268049 CD7P09564 240 aa6.37□□□□□ -1.39
USP3-201ENST00000268049 IGLC2P0DOY2 106 aa6.37□□□□□ -1.39
USP3-201ENST00000268049 IGLC3P0DOY3 106 aa6.37□□□□□ -1.39
USP3-201ENST00000268049 MRPL27Q9P0M9 148 aaKnown RBP6.37□□□□□ -1.39
USP3-201ENST00000268049 ABCA4P78363 2273 aa6.37□□□□□ -1.39
USP3-201ENST00000268049 LY6G6DO95868 133 aa6.36□□□□□ -1.39
USP3-201ENST00000268049 HILS1P60008 231 aa6.36□□□□□ -1.39
USP3-201ENST00000268049 LINC00305Q7Z4B0 112 aa6.36□□□□□ -1.39
USP3-201ENST00000268049 WFDC12Q8WWY7 111 aa6.36□□□□□ -1.39
USP3-201ENST00000268049 SRSF8Q9BRL6 282 aaKnown RBP6.36□□□□□ -1.39
USP3-201ENST00000268049 FAM208BQ5VWN6 2430 aa6.36□□□□□ -1.39
USP3-201ENST00000268049 ICE1Q9Y2F5 2266 aa6.36□□□□□ -1.39
USP3-201ENST00000268049 TMEM200BQ69YZ2 307 aa6.36□□□□□ -1.39
USP3-201ENST00000268049 NPIPB3Q92617 1050 aa6.36□□□□□ -1.39
USP3-201ENST00000268049 IFI27L2Q9H2X8 130 aa6.36□□□□□ -1.39
USP3-201ENST00000268049 WFDC1Q9HC57 220 aa6.36□□□□□ -1.39
USP3-201ENST00000268049 CHTOPQ9Y3Y2 248 aaKnown RBP6.36□□□□□ -1.39
USP3-201ENST00000268049 ACACBO00763 2458 aa6.36□□□□□ -1.39
USP3-201ENST00000268049 IGHV4-30-2A0A087WSY4 118 aa6.36□□□□□ -1.39
USP3-201ENST00000268049 ADARB2-AS1A8MUL3 147 aa6.36□□□□□ -1.39
USP3-201ENST00000268049 C9JAW5 83 aa6.36□□□□□ -1.39
USP3-201ENST00000268049 C12orf77C9JDV5 145 aa6.36□□□□□ -1.39
USP3-201ENST00000268049 BUB1B-PAK6H3BSN5 160 aa6.36□□□□□ -1.39
USP3-201ENST00000268049 NBEAP1P0C6P0 100 aa6.36□□□□□ -1.39
USP3-201ENST00000268049 C9orf139Q6ZV77 190 aa6.36□□□□□ -1.39
USP3-201ENST00000268049 RNF182Q8N6D2 247 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms