RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 KIR2DL4Q99706 377 aa7.03□□□□□ -1.28
VAPB-201ENST00000265619 A0A1B0GWB2 263 aa7.03□□□□□ -1.28
VAPB-201ENST00000265619 PRSS29PA6NIE9 313 aa7.03□□□□□ -1.28
VAPB-201ENST00000265619 TNFRSF1AP19438 455 aa7.03□□□□□ -1.28
VAPB-201ENST00000265619 RPL32P62910 135 aaKnown RBP7.03□□□□□ -1.28
VAPB-201ENST00000265619 DIAPH2-AS1Q14236 149 aa7.03□□□□□ -1.28
VAPB-201ENST00000265619 SFTA2Q6UW10 78 aa7.03□□□□□ -1.28
VAPB-201ENST00000265619 COQ2Q96H96 371 aa7.03□□□□□ -1.28
VAPB-201ENST00000265619 TAAR6Q96RI8 345 aa7.03□□□□□ -1.28
VAPB-201ENST00000265619 C1QTNF4Q9BXJ3 329 aa7.03□□□□□ -1.28
VAPB-201ENST00000265619 RPP21Q9H633 154 aaKnown RBP7.03□□□□□ -1.28
VAPB-201ENST00000265619 SPRR3Q9UBC9 169 aa7.03□□□□□ -1.28
VAPB-201ENST00000265619 OR13A1Q8NGR1 328 aa7.03□□□□□ -1.28
VAPB-201ENST00000265619 CHAC1Q9BUX1 264 aa7.03□□□□□ -1.28
VAPB-201ENST00000265619 MAP1AP78559 2803 aaPredicted RBP7.02□□□□□ -1.28
VAPB-201ENST00000265619 TRAV8-1A0A0A6YYK1 113 aa7.02□□□□□ -1.29
VAPB-201ENST00000265619 CCDC179H3BU77 68 aa7.02□□□□□ -1.29
VAPB-201ENST00000265619 M0QXV9 152 aa7.02□□□□□ -1.29
VAPB-201ENST00000265619 ARMS2P0C7Q2 107 aa7.02□□□□□ -1.29
VAPB-201ENST00000265619 CT45A6P0DMU7 189 aa7.02□□□□□ -1.29
VAPB-201ENST00000265619 CT45A5P0DMU8 189 aa7.02□□□□□ -1.29
VAPB-201ENST00000265619 CT45A7P0DMV0 189 aa7.02□□□□□ -1.29
VAPB-201ENST00000265619 FOXI1Q12951 378 aa7.02□□□□□ -1.29
VAPB-201ENST00000265619 ZNF146Q15072 292 aa7.02□□□□□ -1.29
VAPB-201ENST00000265619 GAGE13Q4V321 117 aa7.02□□□□□ -1.29
VAPB-201ENST00000265619 CT45A1Q5HYN5 189 aa7.02□□□□□ -1.29
VAPB-201ENST00000265619 ZNF826PQ6ZT77 177 aa7.02□□□□□ -1.29
VAPB-201ENST00000265619 TTC9CQ8N5M4 171 aa7.02□□□□□ -1.29
VAPB-201ENST00000265619 CT45A3Q8NHU0 189 aa7.02□□□□□ -1.29
VAPB-201ENST00000265619 ANAPC13Q9BS18 74 aa7.02□□□□□ -1.29
VAPB-201ENST00000265619 TEX50A0A1B0GTY4 177 aa7.02□□□□□ -1.29
VAPB-201ENST00000265619 J3QR89 54 aa7.02□□□□□ -1.29
VAPB-201ENST00000265619 PLXNB1O43157 2135 aa7.02□□□□□ -1.29
VAPB-201ENST00000265619 APOMO95445 188 aa7.02□□□□□ -1.29
VAPB-201ENST00000265619 RBP4P02753 201 aa7.02□□□□□ -1.29
VAPB-201ENST00000265619 C8orf88P0DMB2 117 aa7.02□□□□□ -1.29
VAPB-201ENST00000265619 LEAP2Q969E1 77 aa7.02□□□□□ -1.29
VAPB-201ENST00000265619 PRELID3AQ96N28 172 aa7.02□□□□□ -1.29
VAPB-201ENST00000265619 PRSS22Q9GZN4 317 aa7.02□□□□□ -1.29
VAPB-201ENST00000265619 SPG11Q96JI7 2443 aa7.02□□□□□ -1.29
VAPB-201ENST00000265619 MOB1BQ7L9L4 216 aa7.02□□□□□ -1.29
VAPB-201ENST00000265619 LINC00596Q86U02 117 aa7.02□□□□□ -1.29
VAPB-201ENST00000265619 SRRM4A7MD48 611 aaKnown RBP7.01□□□□□ -1.29
VAPB-201ENST00000265619 ZNF785A8K8V0 405 aa7.01□□□□□ -1.29
VAPB-201ENST00000265619 GRPP07492 148 aa7.01□□□□□ -1.29
VAPB-201ENST00000265619 ZNF134P52741 427 aa7.01□□□□□ -1.29
VAPB-201ENST00000265619 GNG3P63215 75 aa7.01□□□□□ -1.29
VAPB-201ENST00000265619 GAGE5Q13069 117 aa7.01□□□□□ -1.29
VAPB-201ENST00000265619 GAGE6Q13070 117 aa7.01□□□□□ -1.29
VAPB-201ENST00000265619 FAM162BQ5T6X4 162 aa7.01□□□□□ -1.29
VAPB-201ENST00000265619 PATE2Q6UY27 113 aa7.01□□□□□ -1.29
VAPB-201ENST00000265619 CIARTQ8N365 385 aaPredicted RBP7.01□□□□□ -1.29
VAPB-201ENST00000265619 PRSS3P2Q8NHM4 247 aa7.01□□□□□ -1.29
VAPB-201ENST00000265619 CARD19Q96LW7 228 aa7.01□□□□□ -1.29
VAPB-201ENST00000265619 RUSC1-AS1Q66K80 236 aa7.01□□□□□ -1.29
VAPB-201ENST00000265619 MAPKAPK5-AS1Q8N8E1 139 aa7.01□□□□□ -1.29
VAPB-201ENST00000265619 MLST8Q9BVC4 326 aa7.01□□□□□ -1.29
VAPB-201ENST00000265619 WI2-2373I1.2A0A1W2PRP0 233 aa7□□□□□ -1.29
VAPB-201ENST00000265619 C19orf71A6NCJ1 209 aa7□□□□□ -1.29
VAPB-201ENST00000265619 ERVK11-1P61568 191 aa7□□□□□ -1.29
VAPB-201ENST00000265619 RPRMLQ8N4K4 120 aa7□□□□□ -1.29
VAPB-201ENST00000265619 AJUBAQ96IF1 538 aa7□□□□□ -1.29
VAPB-201ENST00000265619 SIGLEC8Q9NYZ4 499 aa7□□□□□ -1.29
VAPB-201ENST00000265619 CYSLTR1Q9Y271 337 aa7□□□□□ -1.29
VAPB-201ENST00000265619 TRBV20-1A0A075B6N2 111 aa7□□□□□ -1.29
VAPB-201ENST00000265619 TRBV25-1A0A075B6N4 114 aa7□□□□□ -1.29
VAPB-201ENST00000265619 FAM90A9PA6NNJ1 464 aa7□□□□□ -1.29
VAPB-201ENST00000265619 SS18L1O75177 396 aaPredicted RBP7□□□□□ -1.29
VAPB-201ENST00000265619 RBPMS2Q6ZRY4 209 aaKnown RBP7□□□□□ -1.29
VAPB-201ENST00000265619 MDS2Q8NDY4 140 aa7□□□□□ -1.29
VAPB-201ENST00000265619 TRAV17A0A0B4J275 112 aa7□□□□□ -1.29
VAPB-201ENST00000265619 P01737 135 aa7□□□□□ -1.29
VAPB-201ENST00000265619 NBL1P41271 181 aa7□□□□□ -1.29
VAPB-201ENST00000265619 LGALS9BQ3B8N2 356 aa7□□□□□ -1.29
VAPB-201ENST00000265619 Q6AWC8 147 aa7□□□□□ -1.29
VAPB-201ENST00000265619 LGALS9CQ6DKI2 356 aa7□□□□□ -1.29
VAPB-201ENST00000265619 FXYD5Q96DB9 178 aa7□□□□□ -1.29
VAPB-201ENST00000265619 SMKR1H3BMG3 65 aa6.99□□□□□ -1.29
VAPB-201ENST00000265619 PRTN3P24158 256 aa6.99□□□□□ -1.29
VAPB-201ENST00000265619 FKBP2P26885 142 aaKnown RBP6.99□□□□□ -1.29
VAPB-201ENST00000265619 EDDM3AQ14507 147 aa6.99□□□□□ -1.29
VAPB-201ENST00000265619 GTSCR1Q86UQ5 136 aa6.99□□□□□ -1.29
VAPB-201ENST00000265619 CEND1Q8N111 149 aa6.99□□□□□ -1.29
VAPB-201ENST00000265619 C3orf56Q8N813 242 aa6.99□□□□□ -1.29
VAPB-201ENST00000265619 UBTD1Q9HAC8 227 aa6.99□□□□□ -1.29
VAPB-201ENST00000265619 POLDIP2Q9Y2S7 368 aa6.99□□□□□ -1.29
VAPB-201ENST00000265619 J3QT63 122 aa6.99□□□□□ -1.29
VAPB-201ENST00000265619 DLL1O00548 723 aa6.99□□□□□ -1.29
VAPB-201ENST00000265619 FSTL3O95633 263 aa6.99□□□□□ -1.29
VAPB-201ENST00000265619 PCBD1P61457 104 aa6.99□□□□□ -1.29
VAPB-201ENST00000265619 PLP2Q04941 152 aa6.99□□□□□ -1.29
VAPB-201ENST00000265619 C12orf74Q32Q52 190 aa6.99□□□□□ -1.29
VAPB-201ENST00000265619 ZNF414Q96IQ9 312 aa6.99□□□□□ -1.29
VAPB-201ENST00000265619 PAXXQ9BUH6 204 aa6.99□□□□□ -1.29
VAPB-201ENST00000265619 HHLA3Q9XRX5 114 aa6.99□□□□□ -1.29
VAPB-201ENST00000265619 FAM208BQ5VWN6 2430 aa6.99□□□□□ -1.29
VAPB-201ENST00000265619 NPIPB5A8MRT5 1133 aa6.99□□□□□ -1.29
VAPB-201ENST00000265619 SLC25A5P05141 298 aaKnown RBP6.99□□□□□ -1.29
VAPB-201ENST00000265619 CSN1S1P47710 185 aa6.99□□□□□ -1.29
VAPB-201ENST00000265619 KLRD1Q13241 179 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms