RNA–Protein interactions for RNA: ENST00000264158.12

RAB3GAP1-201, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3GAP1, Length 4,914 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-201ENST00000264158 LHBP01229 141 aa7.57□□□□□ -1.2
RAB3GAP1-201ENST00000264158 IGLV3-1P01715 115 aa7.57□□□□□ -1.2
RAB3GAP1-201ENST00000264158 PRB4P10163 310 aaPredicted RBP7.57□□□□□ -1.2
RAB3GAP1-201ENST00000264158 NUDT10Q8NFP7 164 aa7.57□□□□□ -1.2
RAB3GAP1-201ENST00000264158 NUDT11Q96G61 164 aa7.57□□□□□ -1.2
RAB3GAP1-201ENST00000264158 H3BVH4 76 aa7.56□□□□□ -1.2
RAB3GAP1-201ENST00000264158 IGFL2Q6UWQ7 119 aa7.56□□□□□ -1.2
RAB3GAP1-201ENST00000264158 HIST1H4GQ99525 98 aa7.56□□□□□ -1.2
RAB3GAP1-201ENST00000264158 CHCHD5Q9BSY4 110 aa7.56□□□□□ -1.2
RAB3GAP1-201ENST00000264158 IGHV1-3A0A0C4DH29 117 aa7.56□□□□□ -1.2
RAB3GAP1-201ENST00000264158 CCL24O00175 119 aa7.56□□□□□ -1.2
RAB3GAP1-201ENST00000264158 RNASE4P34096 147 aaKnown RBP7.56□□□□□ -1.2
RAB3GAP1-201ENST00000264158 LEPP41159 167 aa7.56□□□□□ -1.2
RAB3GAP1-201ENST00000264158 MLNRO43193 412 aa7.56□□□□□ -1.2
RAB3GAP1-201ENST00000264158 LINC00614P0C842 121 aa7.56□□□□□ -1.2
RAB3GAP1-201ENST00000264158 RPL13AP40429 203 aaKnown RBP7.56□□□□□ -1.2
RAB3GAP1-201ENST00000264158 SAPCD1Q5SSQ6 148 aa7.56□□□□□ -1.2
RAB3GAP1-201ENST00000264158 CDPF1Q6NVV7 123 aa7.56□□□□□ -1.2
RAB3GAP1-201ENST00000264158 TSKUQ8WUA8 353 aa7.56□□□□□ -1.2
RAB3GAP1-201ENST00000264158 MBNL3Q9NUK0 354 aaKnown RBP7.56□□□□□ -1.2
RAB3GAP1-201ENST00000264158 LOC107984156A0A0G2JMH3 177 aa7.55□□□□□ -1.2
RAB3GAP1-201ENST00000264158 C3orf79P0CE67 100 aa7.55□□□□□ -1.2
RAB3GAP1-201ENST00000264158 DLX1P56177 255 aa7.55□□□□□ -1.2
RAB3GAP1-201ENST00000264158 C5orf64Q2M2E5 130 aa7.55□□□□□ -1.2
RAB3GAP1-201ENST00000264158 CFAP161Q6P656 301 aa7.55□□□□□ -1.2
RAB3GAP1-201ENST00000264158 ARL17AQ8IVW1 177 aa7.55□□□□□ -1.2
RAB3GAP1-201ENST00000264158 POLR3KQ9Y2Y1 108 aaPredicted RBP7.55□□□□□ -1.2
RAB3GAP1-201ENST00000264158 SPTBN4Q9H254 2564 aa7.55□□□□□ -1.2
RAB3GAP1-201ENST00000264158 TRBV20OR9-2A0A075B6H5 130 aa7.55□□□□□ -1.2
RAB3GAP1-201ENST00000264158 TRAV8-6A0A0B4J262 113 aa7.55□□□□□ -1.2
RAB3GAP1-201ENST00000264158 OVOL3O00110 214 aa7.55□□□□□ -1.2
RAB3GAP1-201ENST00000264158 FBLN7Q53RD9 439 aa7.55□□□□□ -1.2
RAB3GAP1-201ENST00000264158 HAPLN4Q86UW8 402 aa7.55□□□□□ -1.2
RAB3GAP1-201ENST00000264158 PKD1L2Q7Z442 2459 aa7.55□□□□□ -1.2
RAB3GAP1-201ENST00000264158 PRSS57Q6UWY2 283 aa7.55□□□□□ -1.2
RAB3GAP1-201ENST00000264158 GP9P14770 177 aa7.55□□□□□ -1.2
RAB3GAP1-201ENST00000264158 RNF183Q96D59 192 aa7.55□□□□□ -1.2
RAB3GAP1-201ENST00000264158 TMEM160Q9NX00 188 aa7.55□□□□□ -1.2
RAB3GAP1-201ENST00000264158 ZNF257Q9Y2Q1 563 aa7.55□□□□□ -1.2
RAB3GAP1-201ENST00000264158 TRGV1A0A0A0MS02 117 aa7.54□□□□□ -1.2
RAB3GAP1-201ENST00000264158 MLANAQ16655 118 aa7.54□□□□□ -1.2
RAB3GAP1-201ENST00000264158 SNHG12Q9BXW3 62 aa7.54□□□□□ -1.2
RAB3GAP1-201ENST00000264158 OTORQ9NRC9 128 aa7.54□□□□□ -1.2
RAB3GAP1-201ENST00000264158 ZNF106Q9H2Y7 1883 aaKnown RBP7.54□□□□□ -1.2
RAB3GAP1-201ENST00000264158 C19orf84I3L1E1 186 aa7.54□□□□□ -1.2
RAB3GAP1-201ENST00000264158 TDGF1P3P51864 188 aa7.54□□□□□ -1.2
RAB3GAP1-201ENST00000264158 DEFB131AP59861 70 aa7.54□□□□□ -1.2
RAB3GAP1-201ENST00000264158 Q8NA96 180 aa7.54□□□□□ -1.2
RAB3GAP1-201ENST00000264158 BUB1B-PAK6H3BSN5 160 aa7.54□□□□□ -1.2
RAB3GAP1-201ENST00000264158 ELANEP08246 267 aa7.54□□□□□ -1.2
RAB3GAP1-201ENST00000264158 ORMDL3Q8N138 153 aa7.54□□□□□ -1.2
RAB3GAP1-201ENST00000264158 ZNF503-AS2A6NEH8 195 aa7.54□□□□□ -1.2
RAB3GAP1-201ENST00000264158 M0R3E3 92 aa7.54□□□□□ -1.2
RAB3GAP1-201ENST00000264158 SMIM13P0DJ93 91 aa7.54□□□□□ -1.2
RAB3GAP1-201ENST00000264158 CIARTQ8N365 385 aaPredicted RBP7.54□□□□□ -1.2
RAB3GAP1-201ENST00000264158 LY96Q9Y6Y9 160 aa7.54□□□□□ -1.2
RAB3GAP1-201ENST00000264158 C2CD3Q4AC94 2353 aa7.53□□□□□ -1.2
RAB3GAP1-201ENST00000264158 IGKV1D-17A0A075B6S4 117 aa7.53□□□□□ -1.2
RAB3GAP1-201ENST00000264158 CD7P09564 240 aa7.53□□□□□ -1.2
RAB3GAP1-201ENST00000264158 SUMO2P61956 95 aaKnown RBP7.53□□□□□ -1.2
RAB3GAP1-201ENST00000264158 YLPM1P49750 1951 aaKnown RBP7.53□□□□□ -1.2
RAB3GAP1-201ENST00000264158 MTORP42345 2549 aa7.53□□□□□ -1.2
RAB3GAP1-201ENST00000264158 LOXL1Q08397 574 aaPredicted RBP7.53□□□□□ -1.2
RAB3GAP1-201ENST00000264158 PIFOQ8TCI5 191 aa7.53□□□□□ -1.2
RAB3GAP1-201ENST00000264158 EPG5Q9HCE0 2579 aa7.53□□□□□ -1.2
RAB3GAP1-201ENST00000264158 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.53□□□□□ -1.2
RAB3GAP1-201ENST00000264158 NDUFB8O95169 186 aa7.53□□□□□ -1.2
RAB3GAP1-201ENST00000264158 LINC00479Q96M42 142 aa7.53□□□□□ -1.2
RAB3GAP1-201ENST00000264158 H3BUT2 72 aa7.53□□□□□ -1.2
RAB3GAP1-201ENST00000264158 IGHV3-53P01767 116 aa7.53□□□□□ -1.2
RAB3GAP1-201ENST00000264158 ASIPP42127 132 aa7.53□□□□□ -1.2
RAB3GAP1-201ENST00000264158 FXYD7P58549 80 aa7.53□□□□□ -1.2
RAB3GAP1-201ENST00000264158 NUP35Q8NFH5 326 aa7.53□□□□□ -1.2
RAB3GAP1-201ENST00000264158 POLQO75417 2590 aa7.52□□□□□ -1.2
RAB3GAP1-201ENST00000264158 TMEM238LA0A1B0GVL6 79 aa7.52□□□□□ -1.21
RAB3GAP1-201ENST00000264158 A6NJY4 79 aa7.52□□□□□ -1.21
RAB3GAP1-201ENST00000264158 Q6AWC8 147 aa7.52□□□□□ -1.21
RAB3GAP1-201ENST00000264158 ZNF114Q8NC26 417 aa7.52□□□□□ -1.21
RAB3GAP1-201ENST00000264158 NCOA6Q14686 2063 aaPredicted RBP7.52□□□□□ -1.21
RAB3GAP1-201ENST00000264158 A0A1B0GW15 77 aa7.52□□□□□ -1.21
RAB3GAP1-201ENST00000264158 INSP01308 110 aa7.52□□□□□ -1.21
RAB3GAP1-201ENST00000264158 ATP5L2Q7Z4Y8 100 aa7.52□□□□□ -1.21
RAB3GAP1-201ENST00000264158 FER1L6-AS1Q8NA97 138 aa7.52□□□□□ -1.21
RAB3GAP1-201ENST00000264158 PSG8Q9UQ74 426 aa7.52□□□□□ -1.21
RAB3GAP1-201ENST00000264158 H7C2G1 150 aa7.52□□□□□ -1.21
RAB3GAP1-201ENST00000264158 M0R381 172 aa7.52□□□□□ -1.21
RAB3GAP1-201ENST00000264158 WDR86Q86TI4 376 aa7.52□□□□□ -1.21
RAB3GAP1-201ENST00000264158 GEMIN7Q9H840 131 aaKnown RBP7.52□□□□□ -1.21
RAB3GAP1-201ENST00000264158 XCL2Q9UBD3 114 aa7.52□□□□□ -1.21
RAB3GAP1-201ENST00000264158 COL4A4P53420 1690 aaPredicted RBP7.52□□□□□ -1.21
RAB3GAP1-201ENST00000264158 A0A1W2PNU3 283 aaPredicted RBP7.52□□□□□ -1.21
RAB3GAP1-201ENST00000264158 FAM223BA6NKX1 122 aa7.52□□□□□ -1.21
RAB3GAP1-201ENST00000264158 TYMSP04818 313 aa7.52□□□□□ -1.21
RAB3GAP1-201ENST00000264158 C8orf86Q6ZUL3 223 aa7.52□□□□□ -1.21
RAB3GAP1-201ENST00000264158 FAM223AQ8IWN6 122 aa7.52□□□□□ -1.21
RAB3GAP1-201ENST00000264158 RMI2Q96E14 147 aa7.52□□□□□ -1.21
RAB3GAP1-201ENST00000264158 RCHY1Q96PM5 261 aa7.52□□□□□ -1.21
RAB3GAP1-201ENST00000264158 SPCS1Q9Y6A9 102 aa7.52□□□□□ -1.21
RAB3GAP1-201ENST00000264158 PRRC2AP48634 2157 aaKnown RBP7.51□□□□□ -1.21
RAB3GAP1-201ENST00000264158 PAX1P15863 534 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms