RNA–Protein interactions for RNA: ENST00000263598.6

LCN1-201, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-201ENST00000263598 SRPXP78539 464 aa6.25□□□□□ -1.41
LCN1-201ENST00000263598 CLLU1Q5K131 121 aa6.25□□□□□ -1.41
LCN1-201ENST00000263598 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.25□□□□□ -1.41
LCN1-201ENST00000263598 TMEM256Q8N2U0 113 aa6.25□□□□□ -1.41
LCN1-201ENST00000263598 C9orf62Q8N4C0 152 aa6.25□□□□□ -1.41
LCN1-201ENST00000263598 TOMM5Q8N4H5 51 aa6.25□□□□□ -1.41
LCN1-201ENST00000263598 OR1S1Q8NH92 325 aa6.25□□□□□ -1.41
LCN1-201ENST00000263598 SMIM4Q8WVI0 70 aa6.25□□□□□ -1.41
LCN1-201ENST00000263598 C16orf74Q96GX8 76 aa6.25□□□□□ -1.41
LCN1-201ENST00000263598 SCGB3A2Q96PL1 93 aa6.25□□□□□ -1.41
LCN1-201ENST00000263598 TMEM147Q9BVK8 224 aa6.25□□□□□ -1.41
LCN1-201ENST00000263598 PPP1R14DQ9NXH3 145 aa6.25□□□□□ -1.41
LCN1-201ENST00000263598 PRR13Q9NZ81 148 aa6.25□□□□□ -1.41
LCN1-201ENST00000263598 SHPKQ9UHJ6 478 aa6.25□□□□□ -1.41
LCN1-201ENST00000263598 TIMM8BQ9Y5J9 83 aaPredicted RBP6.25□□□□□ -1.41
LCN1-201ENST00000263598 TRAV12-2A0A075B6T6 113 aa6.24□□□□□ -1.41
LCN1-201ENST00000263598 PLAC8L1A1L4L8 177 aa6.24□□□□□ -1.41
LCN1-201ENST00000263598 TCRBP04435 133 aa6.24□□□□□ -1.41
LCN1-201ENST00000263598 IL5P05113 134 aa6.24□□□□□ -1.41
LCN1-201ENST00000263598 HTN1P15515 57 aa6.24□□□□□ -1.41
LCN1-201ENST00000263598 ORM2P19652 201 aa6.24□□□□□ -1.41
LCN1-201ENST00000263598 BTF3P20290 206 aaKnown RBP6.24□□□□□ -1.41
LCN1-201ENST00000263598 RHOBP62745 196 aa6.24□□□□□ -1.41
LCN1-201ENST00000263598 RPP30P78346 268 aaKnown RBP6.24□□□□□ -1.41
LCN1-201ENST00000263598 FGL1Q08830 312 aa6.24□□□□□ -1.41
LCN1-201ENST00000263598 TEX261Q6UWH6 196 aa6.24□□□□□ -1.41
LCN1-201ENST00000263598 LYZL2Q7Z4W2 148 aa6.24□□□□□ -1.41
LCN1-201ENST00000263598 TMEM144Q7Z5S9 345 aa6.24□□□□□ -1.41
LCN1-201ENST00000263598 RNF182Q8N6D2 247 aa6.24□□□□□ -1.41
LCN1-201ENST00000263598 THAP8Q8NA92 274 aa6.24□□□□□ -1.41
LCN1-201ENST00000263598 ZNF738Q8NE65 137 aa6.24□□□□□ -1.41
LCN1-201ENST00000263598 BPIFCQ8NFQ6 507 aa6.24□□□□□ -1.41
LCN1-201ENST00000263598 OR51S1Q8NGJ8 323 aa6.24□□□□□ -1.41
LCN1-201ENST00000263598 OR10J6PQ8NGY7 276 aa6.24□□□□□ -1.41
LCN1-201ENST00000263598 GNPNAT1Q96EK6 184 aaPredicted RBP6.24□□□□□ -1.41
LCN1-201ENST00000263598 Q9H3A6 140 aa6.24□□□□□ -1.41
LCN1-201ENST00000263598 IGKV1OR2-108A0A075B7D4 117 aa6.23□□□□□ -1.41
LCN1-201ENST00000263598 A0A1W2PPQ1 181 aa6.23□□□□□ -1.41
LCN1-201ENST00000263598 EPM2AB3EWF7 344 aa6.23□□□□□ -1.41
LCN1-201ENST00000263598 ADAP1O75689 374 aa6.23□□□□□ -1.41
LCN1-201ENST00000263598 IAPPP10997 89 aa6.23□□□□□ -1.41
LCN1-201ENST00000263598 BTCP35070 178 aa6.23□□□□□ -1.41
LCN1-201ENST00000263598 FAUP35544 74 aaKnown RBP6.23□□□□□ -1.41
LCN1-201ENST00000263598 KRTAP10-2P60368 255 aa6.23□□□□□ -1.41
LCN1-201ENST00000263598 RAB14P61106 215 aa6.23□□□□□ -1.41
LCN1-201ENST00000263598 OR5I1Q13606 314 aa6.23□□□□□ -1.41
LCN1-201ENST00000263598 Q5BKY6 102 aa6.23□□□□□ -1.41
LCN1-201ENST00000263598 IGFL4Q6B9Z1 124 aa6.23□□□□□ -1.41
LCN1-201ENST00000263598 ZNF493Q6ZR52 646 aa6.23□□□□□ -1.41
LCN1-201ENST00000263598 SUN5Q8TC36 379 aa6.23□□□□□ -1.41
LCN1-201ENST00000263598 ZNF431Q8TF32 576 aaPredicted RBP6.23□□□□□ -1.41
LCN1-201ENST00000263598 ZNF503Q96F45 646 aa6.23□□□□□ -1.41
LCN1-201ENST00000263598 C17orf77Q96MU5 243 aa6.23□□□□□ -1.41
LCN1-201ENST00000263598 CIB3Q96Q77 187 aaPredicted RBP6.23□□□□□ -1.41
LCN1-201ENST00000263598 SLC25A39Q9BZJ4 359 aaPredicted RBP6.23□□□□□ -1.41
LCN1-201ENST00000263598 GPN1Q9HCN4 374 aaPredicted RBP6.23□□□□□ -1.41
LCN1-201ENST00000263598 NOP10Q9NPE3 64 aaKnown RBP6.23□□□□□ -1.41
LCN1-201ENST00000263598 HSPB11Q9Y547 144 aa6.23□□□□□ -1.41
LCN1-201ENST00000263598 TRAV26-1A0A087WT03 109 aa6.22□□□□□ -1.41
LCN1-201ENST00000263598 TRAV8-2A0A0B4J237 113 aa6.22□□□□□ -1.41
LCN1-201ENST00000263598 DUXBA0A1W2PPF3 345 aa6.22□□□□□ -1.41
LCN1-201ENST00000263598 MED6O75586 246 aa6.22□□□□□ -1.41
LCN1-201ENST00000263598 GIPP09681 153 aaPredicted RBP6.22□□□□□ -1.41
LCN1-201ENST00000263598 H2AFB2P0C5Z0 115 aa6.22□□□□□ -1.41
LCN1-201ENST00000263598 RPL7P18124 248 aaKnown RBP6.22□□□□□ -1.41
LCN1-201ENST00000263598 RAP2BP61225 183 aa6.22□□□□□ -1.41
LCN1-201ENST00000263598 HIST1H1AQ02539 215 aaPredicted RBP6.22□□□□□ -1.41
LCN1-201ENST00000263598 ZNF680Q8NEM1 530 aa6.22□□□□□ -1.41
LCN1-201ENST00000263598 OR8A1Q8NGG7 326 aa6.22□□□□□ -1.41
LCN1-201ENST00000263598 RXFP4Q8TDU9 374 aa6.22□□□□□ -1.41
LCN1-201ENST00000263598 TMEM263Q8WUH6 116 aaKnown RBP6.22□□□□□ -1.41
LCN1-201ENST00000263598 UHRF2Q96PU4 802 aa6.22□□□□□ -1.41
LCN1-201ENST00000263598 UPK3BQ9BT76 320 aa6.22□□□□□ -1.41
LCN1-201ENST00000263598 A0A0J9YY99 117 aa6.21□□□□□ -1.42
LCN1-201ENST00000263598 HMSDA8MTL9 139 aa6.21□□□□□ -1.42
LCN1-201ENST00000263598 H7BYZ3 331 aa6.21□□□□□ -1.42
LCN1-201ENST00000263598 PITX3O75364 302 aa6.21□□□□□ -1.42
LCN1-201ENST00000263598 INAFM2P0DMQ5 153 aa6.21□□□□□ -1.42
LCN1-201ENST00000263598 GATA2P23769 480 aaPredicted RBP6.21□□□□□ -1.42
LCN1-201ENST00000263598 CDKN1BP46527 198 aa6.21□□□□□ -1.42
LCN1-201ENST00000263598 DLK1P80370 383 aa6.21□□□□□ -1.42
LCN1-201ENST00000263598 AKR1C1Q04828 323 aa6.21□□□□□ -1.42
LCN1-201ENST00000263598 S100A7AQ86SG5 101 aa6.21□□□□□ -1.42
LCN1-201ENST00000263598 LRRC20Q8TCA0 184 aa6.21□□□□□ -1.42
LCN1-201ENST00000263598 RNASE8Q8TDE3 154 aaKnown RBP6.21□□□□□ -1.42
LCN1-201ENST00000263598 KRTAP1-5Q9BYS1 174 aa6.21□□□□□ -1.42
LCN1-201ENST00000263598 NUDT15Q9NV35 164 aa6.21□□□□□ -1.42
LCN1-201ENST00000263598 APOBP04114 4563 aaKnown RBP6.21□□□□□ -1.42
LCN1-201ENST00000263598 DNAH5Q8TE73 4624 aa6.21□□□□□ -1.42
LCN1-201ENST00000263598 LINC00854A0A1B0GVQ3 168 aa6.2□□□□□ -1.42
LCN1-201ENST00000263598 ANKRD20A5PA0PJZ0 165 aa6.2□□□□□ -1.42
LCN1-201ENST00000263598 H3BNG1 76 aa6.2□□□□□ -1.42
LCN1-201ENST00000263598 H3BRN7 92 aa6.2□□□□□ -1.42
LCN1-201ENST00000263598 EREGO14944 169 aa6.2□□□□□ -1.42
LCN1-201ENST00000263598 RLN2P04090 185 aa6.2□□□□□ -1.42
LCN1-201ENST00000263598 SLC25A6P12236 298 aa6.2□□□□□ -1.42
LCN1-201ENST00000263598 CXCL3P19876 107 aa6.2□□□□□ -1.42
LCN1-201ENST00000263598 ESRGQ1W209 222 aa6.2□□□□□ -1.42
LCN1-201ENST00000263598 TMEM182Q6ZP80 229 aaPredicted RBP6.2□□□□□ -1.42
LCN1-201ENST00000263598 C20orf144Q9BQM9 153 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms