RNA–Protein interactions for RNA: ENST00000262643.7

CCNE1-201, Transcript of cyclin E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNE1, Length 2,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-201ENST00000262643 YTHDF2Q9Y5A9 579 aaKnown RBP16.1■□□□□ 0.17
CCNE1-201ENST00000262643 C11orf94C9JXX5 98 aa16.09■□□□□ 0.17
CCNE1-201ENST00000262643 TGOLN2O43493 480 aa16.09■□□□□ 0.17
CCNE1-201ENST00000262643 FABP1P07148 127 aa16.09■□□□□ 0.17
CCNE1-201ENST00000262643 FOLR2P14207 255 aa16.09■□□□□ 0.17
CCNE1-201ENST00000262643 FAM90A2PQ658T7 463 aa16.09■□□□□ 0.17
CCNE1-201ENST00000262643 DYNLRB2Q8TF09 96 aa16.09■□□□□ 0.17
CCNE1-201ENST00000262643 C20orf24Q9BUV8 137 aa16.09■□□□□ 0.17
CCNE1-201ENST00000262643 IZUMO1RA6ND01 250 aa16.09■□□□□ 0.17
CCNE1-201ENST00000262643 M0R036 132 aa16.09■□□□□ 0.17
CCNE1-201ENST00000262643 PYYP10082 97 aa16.09■□□□□ 0.17
CCNE1-201ENST00000262643 ADMP35318 185 aa16.09■□□□□ 0.17
CCNE1-201ENST00000262643 LEMD1Q68G75 181 aa16.09■□□□□ 0.17
CCNE1-201ENST00000262643 UNQ9165/PRO28630Q6UXU0 137 aa16.09■□□□□ 0.17
CCNE1-201ENST00000262643 HIGD1AQ9Y241 93 aa16.09■□□□□ 0.17
CCNE1-201ENST00000262643 SELENOKQ9Y6D0 94 aa16.09■□□□□ 0.17
CCNE1-201ENST00000262643 IL4P05112 153 aa16.08■□□□□ 0.16
CCNE1-201ENST00000262643 SNRPCP09234 159 aaKnown RBP16.08■□□□□ 0.16
CCNE1-201ENST00000262643 FCGR2BP31994 310 aaPredicted RBP16.08■□□□□ 0.16
CCNE1-201ENST00000262643 MRPL27Q9P0M9 148 aaKnown RBP16.08■□□□□ 0.16
CCNE1-201ENST00000262643 FAM74A7A6NL05 159 aa16.07■□□□□ 0.16
CCNE1-201ENST00000262643 H3BQ15 152 aa16.07■□□□□ 0.16
CCNE1-201ENST00000262643 NUPL2O15504 423 aaKnown RBP16.07■□□□□ 0.16
CCNE1-201ENST00000262643 FAM74A3Q4VXF1 159 aa16.07■□□□□ 0.16
CCNE1-201ENST00000262643 LCN12Q6JVE5 192 aa16.07■□□□□ 0.16
CCNE1-201ENST00000262643 Q8WTZ3 238 aa16.07■□□□□ 0.16
CCNE1-201ENST00000262643 TMEM167BQ9NRX6 74 aa16.07■□□□□ 0.16
CCNE1-201ENST00000262643 DNASE2O00115 360 aaPredicted RBP16.07■□□□□ 0.16
CCNE1-201ENST00000262643 CD300EQ496F6 205 aaPredicted RBP16.07■□□□□ 0.16
CCNE1-201ENST00000262643 RNF125Q96EQ8 232 aa16.07■□□□□ 0.16
CCNE1-201ENST00000262643 SLC25A39Q9BZJ4 359 aaPredicted RBP16.07■□□□□ 0.16
CCNE1-201ENST00000262643 OR51M1Q9H341 326 aa16.07■□□□□ 0.16
CCNE1-201ENST00000262643 TMEM213A2RRL7 107 aa16.06■□□□□ 0.16
CCNE1-201ENST00000262643 CBLN1P23435 193 aa16.06■□□□□ 0.16
CCNE1-201ENST00000262643 TM4SF20Q53R12 229 aa16.06■□□□□ 0.16
CCNE1-201ENST00000262643 NIPSNAP3BQ9BS92 247 aa16.06■□□□□ 0.16
CCNE1-201ENST00000262643 PAXXQ9BUH6 204 aa16.06■□□□□ 0.16
CCNE1-201ENST00000262643 A8MWP6 167 aa16.06■□□□□ 0.16
CCNE1-201ENST00000262643 TMEM250H0YL14 139 aa16.06■□□□□ 0.16
CCNE1-201ENST00000262643 NPPCP23582 126 aa16.06■□□□□ 0.16
CCNE1-201ENST00000262643 TMEM88Q6PEY1 159 aa16.06■□□□□ 0.16
CCNE1-201ENST00000262643 ASCL2Q99929 193 aa16.06■□□□□ 0.16
CCNE1-201ENST00000262643 UBE2L3P68036 154 aaKnown RBP16.05■□□□□ 0.16
CCNE1-201ENST00000262643 USF2Q15853 346 aaPredicted RBP16.05■□□□□ 0.16
CCNE1-201ENST00000262643 SUN5Q8TC36 379 aa16.05■□□□□ 0.16
CCNE1-201ENST00000262643 NDUFS6O75380 124 aaKnown RBP16.04■□□□□ 0.16
CCNE1-201ENST00000262643 AKR1C3P42330 323 aa16.04■□□□□ 0.16
CCNE1-201ENST00000262643 DEFB114Q30KQ6 69 aa16.04■□□□□ 0.16
CCNE1-201ENST00000262643 RPUSD4Q96CM3 377 aaKnown RBP16.04■□□□□ 0.16
CCNE1-201ENST00000262643 ZNF414Q96IQ9 312 aa16.04■□□□□ 0.16
CCNE1-201ENST00000262643 ATP6V0BQ99437 205 aa16.04■□□□□ 0.16
CCNE1-201ENST00000262643 RPS10P5Q9NQ39 176 aa16.04■□□□□ 0.16
CCNE1-201ENST00000262643 C7orf77A4D0Y5 90 aa16.04■□□□□ 0.16
CCNE1-201ENST00000262643 ZNF674Q2M3X9 581 aa16.04■□□□□ 0.16
CCNE1-201ENST00000262643 CBLN2Q8IUK8 224 aa16.04■□□□□ 0.16
CCNE1-201ENST00000262643 FXYD5Q96DB9 178 aa16.04■□□□□ 0.16
CCNE1-201ENST00000262643 TVP23CQ96ET8 276 aa16.04■□□□□ 0.16
CCNE1-201ENST00000262643 IGHV3OR16-8A0A075B7F1 116 aa16.03■□□□□ 0.16
CCNE1-201ENST00000262643 ZNF727A8MUV8 499 aa16.03■□□□□ 0.16
CCNE1-201ENST00000262643 PDE6DO43924 150 aa16.03■□□□□ 0.16
CCNE1-201ENST00000262643 Q8N1Y9 231 aa16.03■□□□□ 0.16
CCNE1-201ENST00000262643 OR2K2Q8NGT1 345 aa16.03■□□□□ 0.16
CCNE1-201ENST00000262643 TXNDC17Q9BRA2 123 aa16.03■□□□□ 0.16
CCNE1-201ENST00000262643 SCGB2A1O75556 95 aa16.02■□□□□ 0.16
CCNE1-201ENST00000262643 GTSCR1Q86UQ5 136 aa16.02■□□□□ 0.16
CCNE1-201ENST00000262643 TMEM190Q8WZ59 177 aa16.02■□□□□ 0.16
CCNE1-201ENST00000262643 GAR1Q9NY12 217 aaKnown RBP16.02■□□□□ 0.16
CCNE1-201ENST00000262643 UFC1Q9Y3C8 167 aa16.02■□□□□ 0.16
CCNE1-201ENST00000262643 RHEBQ15382 184 aa16.02■□□□□ 0.15
CCNE1-201ENST00000262643 SMIM7Q9BQ49 75 aa16.02■□□□□ 0.15
CCNE1-201ENST00000262643 SHANK2-AS3Q9BTD1 123 aa16.02■□□□□ 0.15
CCNE1-201ENST00000262643 PARLQ9H300 379 aa16.02■□□□□ 0.15
CCNE1-201ENST00000262643 MLXQ9UH92 298 aa16.02■□□□□ 0.15
CCNE1-201ENST00000262643 TMA7Q9Y2S6 64 aaKnown RBP16.02■□□□□ 0.15
CCNE1-201ENST00000262643 FRMD6-AS1P0C7T7 363 aa16.01■□□□□ 0.15
CCNE1-201ENST00000262643 STXBP6Q8NFX7 210 aa16.01■□□□□ 0.15
CCNE1-201ENST00000262643 SCO2A0A1W2PP80 73 aa16.01■□□□□ 0.15
CCNE1-201ENST00000262643 F6UZH7 168 aa16.01■□□□□ 0.15
CCNE1-201ENST00000262643 H3BRN7 92 aa16.01■□□□□ 0.15
CCNE1-201ENST00000262643 NDUFA4O00483 81 aa16.01■□□□□ 0.15
CCNE1-201ENST00000262643 NDUFB4O95168 129 aa16.01■□□□□ 0.15
CCNE1-201ENST00000262643 IGHV4-30-4P0DP06 118 aa16.01■□□□□ 0.15
CCNE1-201ENST00000262643 SUMO1P63165 101 aaKnown RBP16.01■□□□□ 0.15
CCNE1-201ENST00000262643 TOMM20LQ6UXN7 152 aa16.01■□□□□ 0.15
CCNE1-201ENST00000262643 ZNF600Q6ZNG1 722 aa16.01■□□□□ 0.15
CCNE1-201ENST00000262643 BLNKQ8WV28 456 aa16.01■□□□□ 0.15
CCNE1-201ENST00000262643 ZNF785A8K8V0 405 aa16■□□□□ 0.15
CCNE1-201ENST00000262643 H3BTX0 84 aa16■□□□□ 0.15
CCNE1-201ENST00000262643 ZNF207O43670 478 aaKnown RBP16■□□□□ 0.15
CCNE1-201ENST00000262643 DERL1Q9BUN8 251 aa16■□□□□ 0.15
CCNE1-201ENST00000262643 DAZ1Q9NQZ3 744 aaKnown RBP16■□□□□ 0.15
CCNE1-201ENST00000262643 ARL2-SNX15V9GYD0 113 aa16■□□□□ 0.15
CCNE1-201ENST00000262643 A0A1W2PRE2 83 aa15.99■□□□□ 0.15
CCNE1-201ENST00000262643 GGTLC3B5MD39 225 aa15.99■□□□□ 0.15
CCNE1-201ENST00000262643 RELQ04864 619 aaPredicted RBP15.99■□□□□ 0.15
CCNE1-201ENST00000262643 TMEM61Q8N0U2 210 aa15.99■□□□□ 0.15
CCNE1-201ENST00000262643 ZNF98A6NK75 572 aa15.99■□□□□ 0.15
CCNE1-201ENST00000262643 NBEAP1P0C6P0 100 aa15.99■□□□□ 0.15
CCNE1-201ENST00000262643 SDF2L1Q9HCN8 221 aa15.99■□□□□ 0.15
CCNE1-201ENST00000262643 SBSPONQ8IVN8 264 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms