RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 HBG2P69892 147 aa21.32■■□□□ 1
SMARCD3-201ENST00000262188 TMEM41BQ5BJD5 291 aa21.32■■□□□ 1
SMARCD3-201ENST00000262188 NECAP1Q8NC96 275 aa21.32■■□□□ 1
SMARCD3-201ENST00000262188 UBE2L5PA0A1B0GUS4 154 aa21.31■■□□□ 1
SMARCD3-201ENST00000262188 PROK1P58294 105 aa21.31■■□□□ 1
SMARCD3-201ENST00000262188 PET117Q6UWS5 81 aa21.31■■□□□ 1
SMARCD3-201ENST00000262188 CORTO00230 105 aa21.3■■□□□ 1
SMARCD3-201ENST00000262188 CD28P10747 220 aa21.3■■□□□ 1
SMARCD3-201ENST00000262188 KRTAP10-3P60369 221 aa21.3■■□□□ 1
SMARCD3-201ENST00000262188 KLK9Q2XQG4 91 aa21.3■■□□□ 1
SMARCD3-201ENST00000262188 ACSM6Q6P461 480 aa21.3■■□□□ 1
SMARCD3-201ENST00000262188 C18orf65Q6ZTR6 163 aa21.3■■□□□ 1
SMARCD3-201ENST00000262188 CMTM2Q8TAZ6 248 aa21.3■■□□□ 1
SMARCD3-201ENST00000262188 NPIPB3Q92617 1050 aa21.3■■□□□ 1
SMARCD3-201ENST00000262188 KLK9Q9UKQ9 250 aa21.3■■□□□ 1
SMARCD3-201ENST00000262188 IFNA1P01562 189 aa21.3■■□□□ 1
SMARCD3-201ENST00000262188 FOXE3Q13461 319 aa21.3■■□□□ 1
SMARCD3-201ENST00000262188 THYN1Q9P016 225 aa21.3■■□□□ 1
SMARCD3-201ENST00000262188 PAM16Q9Y3D7 125 aa21.3■■□□□ 1
SMARCD3-201ENST00000262188 H3BUA1 57 aa21.29■■□□□ 1
SMARCD3-201ENST00000262188 CTRLP40313 264 aa21.29■■□□□ 1
SMARCD3-201ENST00000262188 ATP5G2Q06055 141 aa21.29■■□□□ 1
SMARCD3-201ENST00000262188 RFNGQ9Y644 331 aa21.29■■□□□ 1
SMARCD3-201ENST00000262188 F8W735 103 aaPredicted RBP21.28■■□□□ 1
SMARCD3-201ENST00000262188 HNRNPA3P51991 378 aaKnown RBP21.28■■□□□ 1
SMARCD3-201ENST00000262188 ATP5SQ99766 215 aa21.28■■□□□ 1
SMARCD3-201ENST00000262188 IGKV1OR2-108A0A075B7D4 117 aa21.28■■□□□ 1
SMARCD3-201ENST00000262188 KHDC1LQ5JSQ8 128 aa21.28■■□□□ 1
SMARCD3-201ENST00000262188 CCDC140Q96MF4 163 aa21.28■■□□□ 1
SMARCD3-201ENST00000262188 TMEM147Q9BVK8 224 aa21.28■■□□□ 1
SMARCD3-201ENST00000262188 GNB4Q9HAV0 340 aa21.28■■□□□ 1
SMARCD3-201ENST00000262188 TRBV12-3P01733 135 aa21.27■■□□□ 1
SMARCD3-201ENST00000262188 ELANEP08246 267 aa21.27■■□□□ 1
SMARCD3-201ENST00000262188 TREML4Q6UXN2 200 aa21.27■■□□□ 1
SMARCD3-201ENST00000262188 C21orf62Q9NYP8 219 aa21.27■■□□□ 1
SMARCD3-201ENST00000262188 FAM223BA6NKX1 122 aa21.27■□□□□ 0.99
SMARCD3-201ENST00000262188 FAM223AQ8IWN6 122 aa21.27■□□□□ 0.99
SMARCD3-201ENST00000262188 OR2T8A6NH00 312 aa21.26■□□□□ 0.99
SMARCD3-201ENST00000262188 CLEC19AQ6UXS0 136 aa21.26■□□□□ 0.99
SMARCD3-201ENST00000262188 ZNF502Q8TBZ5 544 aa21.26■□□□□ 0.99
SMARCD3-201ENST00000262188 MBD3L1Q8WWY6 194 aa21.26■□□□□ 0.99
SMARCD3-201ENST00000262188 CACNG8Q8WXS5 425 aa21.26■□□□□ 0.99
SMARCD3-201ENST00000262188 BRI3O95415 125 aa21.25■□□□□ 0.99
SMARCD3-201ENST00000262188 Q56UQ5 140 aa21.25■□□□□ 0.99
SMARCD3-201ENST00000262188 Q6ZWC4 215 aa21.25■□□□□ 0.99
SMARCD3-201ENST00000262188 ZNF491Q8N8L2 437 aa21.25■□□□□ 0.99
SMARCD3-201ENST00000262188 OR4X2Q8NGF9 303 aa21.25■□□□□ 0.99
SMARCD3-201ENST00000262188 PXMP4Q9Y6I8 212 aa21.25■□□□□ 0.99
SMARCD3-201ENST00000262188 SCGB1A1P11684 91 aa21.25■□□□□ 0.99
SMARCD3-201ENST00000262188 GPR183P32249 361 aa21.25■□□□□ 0.99
SMARCD3-201ENST00000262188 RUNX1Q01196 453 aa21.25■□□□□ 0.99
SMARCD3-201ENST00000262188 VWC2Q2TAL6 325 aa21.25■□□□□ 0.99
SMARCD3-201ENST00000262188 RNF152Q8N8N0 203 aa21.25■□□□□ 0.99
SMARCD3-201ENST00000262188 TENM1Q9UKZ4 2725 aa21.24■□□□□ 0.99
SMARCD3-201ENST00000262188 A0A1W2PRX2 142 aa21.24■□□□□ 0.99
SMARCD3-201ENST00000262188 SUMO1P63165 101 aaKnown RBP21.24■□□□□ 0.99
SMARCD3-201ENST00000262188 MYOZ3Q8TDC0 251 aa21.24■□□□□ 0.99
SMARCD3-201ENST00000262188 VN1R17PQ8TDU5 208 aa21.24■□□□□ 0.99
SMARCD3-201ENST00000262188 CITED2Q99967 270 aaPredicted RBP21.24■□□□□ 0.99
SMARCD3-201ENST00000262188 TMEM89A2RUT3 159 aa21.23■□□□□ 0.99
SMARCD3-201ENST00000262188 IGLC2P0DOY2 106 aa21.23■□□□□ 0.99
SMARCD3-201ENST00000262188 IGLC3P0DOY3 106 aa21.23■□□□□ 0.99
SMARCD3-201ENST00000262188 MFAP4P55083 255 aa21.23■□□□□ 0.99
SMARCD3-201ENST00000262188 PRR27Q6MZM9 219 aa21.23■□□□□ 0.99
SMARCD3-201ENST00000262188 EEF1AKMT3Q96AZ1 226 aa21.23■□□□□ 0.99
SMARCD3-201ENST00000262188 IGKV1D-37A0A075B6S9 117 aa21.23■□□□□ 0.99
SMARCD3-201ENST00000262188 IGHV3-35A0A0C4DH35 117 aa21.23■□□□□ 0.99
SMARCD3-201ENST00000262188 CLEC3BP05452 202 aa21.23■□□□□ 0.99
SMARCD3-201ENST00000262188 TMEM116Q8NCL8 245 aa21.23■□□□□ 0.99
SMARCD3-201ENST00000262188 USMG5Q96IX5 58 aa21.23■□□□□ 0.99
SMARCD3-201ENST00000262188 TXN2Q99757 166 aa21.23■□□□□ 0.99
SMARCD3-201ENST00000262188 C19orf24Q9BVV8 132 aa21.23■□□□□ 0.99
SMARCD3-201ENST00000262188 NPVFQ9HCQ7 196 aa21.23■□□□□ 0.99
SMARCD3-201ENST00000262188 GNG13Q9P2W3 67 aa21.23■□□□□ 0.99
SMARCD3-201ENST00000262188 M0QZ24 198 aa21.22■□□□□ 0.99
SMARCD3-201ENST00000262188 ZNF90Q03938 601 aa21.22■□□□□ 0.99
SMARCD3-201ENST00000262188 CHRDL1Q9BU40 450 aa21.22■□□□□ 0.99
SMARCD3-201ENST00000262188 TMEM250H0YL14 139 aa21.21■□□□□ 0.99
SMARCD3-201ENST00000262188 GATA2P23769 480 aaPredicted RBP21.21■□□□□ 0.99
SMARCD3-201ENST00000262188 ADIRFQ15847 76 aa21.21■□□□□ 0.99
SMARCD3-201ENST00000262188 TIGITQ495A1 244 aa21.21■□□□□ 0.99
SMARCD3-201ENST00000262188 MGST2Q99735 147 aa21.21■□□□□ 0.99
SMARCD3-201ENST00000262188 RSG1Q9BU20 258 aa21.21■□□□□ 0.99
SMARCD3-201ENST00000262188 WDR83OSQ9Y284 106 aa21.21■□□□□ 0.99
SMARCD3-201ENST00000262188 TCRBV4S1A1TA0A5B7 111 aa21.21■□□□□ 0.99
SMARCD3-201ENST00000262188 GNG7O60262 68 aa21.21■□□□□ 0.99
SMARCD3-201ENST00000262188 FOXL1Q12952 345 aa21.21■□□□□ 0.99
SMARCD3-201ENST00000262188 DEFB136Q30KP8 78 aa21.21■□□□□ 0.99
SMARCD3-201ENST00000262188 TDRG1Q3Y452 100 aa21.21■□□□□ 0.99
SMARCD3-201ENST00000262188 Q6ZN92 141 aa21.21■□□□□ 0.99
SMARCD3-201ENST00000262188 TMEM144Q7Z5S9 345 aa21.21■□□□□ 0.99
SMARCD3-201ENST00000262188 WDR61Q9GZS3 305 aaKnown RBP21.21■□□□□ 0.99
SMARCD3-201ENST00000262188 LSM4Q9Y4Z0 139 aaKnown RBP21.21■□□□□ 0.99
SMARCD3-201ENST00000262188 TRAPPC1Q9Y5R8 145 aa21.21■□□□□ 0.99
SMARCD3-201ENST00000262188 A0A0G2JLM5 398 aa21.2■□□□□ 0.98
SMARCD3-201ENST00000262188 ZFP92A6NM28 416 aa21.2■□□□□ 0.98
SMARCD3-201ENST00000262188 SMIM7Q9BQ49 75 aa21.2■□□□□ 0.98
SMARCD3-201ENST00000262188 IFNA5P01569 189 aa21.19■□□□□ 0.98
SMARCD3-201ENST00000262188 IGLC1P0CG04 106 aa21.19■□□□□ 0.98
SMARCD3-201ENST00000262188 ADMP35318 185 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 166.1 ms