RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 J3KRW8 73 aa10.3□□□□□ -0.76
SNX1-201ENST00000261889 OR2J3O76001 311 aa10.3□□□□□ -0.76
SNX1-201ENST00000261889 CRIP1P50238 77 aa10.3□□□□□ -0.76
SNX1-201ENST00000261889 MZT1Q08AG7 82 aa10.3□□□□□ -0.76
SNX1-201ENST00000261889 C5orf17Q8NAS9 161 aa10.3□□□□□ -0.76
SNX1-201ENST00000261889 MLST8Q9BVC4 326 aa10.3□□□□□ -0.76
SNX1-201ENST00000261889 GAL3ST2Q9H3Q3 398 aa10.3□□□□□ -0.76
SNX1-201ENST00000261889 CRYABP02511 175 aaKnown RBP10.29□□□□□ -0.76
SNX1-201ENST00000261889 IL4P05112 153 aa10.29□□□□□ -0.76
SNX1-201ENST00000261889 POU2AF1Q16633 256 aa10.29□□□□□ -0.76
SNX1-201ENST00000261889 MRGPRG-AS1Q2M3A8 158 aa10.29□□□□□ -0.76
SNX1-201ENST00000261889 LRRC10Q5BKY1 277 aa10.29□□□□□ -0.76
SNX1-201ENST00000261889 C2orf91Q6ZV80 131 aa10.29□□□□□ -0.76
SNX1-201ENST00000261889 SLC25A39Q9BZJ4 359 aaPredicted RBP10.29□□□□□ -0.76
SNX1-201ENST00000261889 RABAC1Q9UI14 185 aa10.29□□□□□ -0.76
SNX1-201ENST00000261889 CSPG4Q6UVK1 2322 aa10.29□□□□□ -0.76
SNX1-201ENST00000261889 MYCNOSP40205 109 aa10.29□□□□□ -0.76
SNX1-201ENST00000261889 RHOGP84095 191 aa10.29□□□□□ -0.76
SNX1-201ENST00000261889 ADIPOQQ15848 244 aa10.29□□□□□ -0.76
SNX1-201ENST00000261889 BPIFA4PQ86YQ2 179 aa10.29□□□□□ -0.76
SNX1-201ENST00000261889 CACNG8Q8WXS5 425 aa10.29□□□□□ -0.76
SNX1-201ENST00000261889 DKK2Q9UBU2 259 aa10.29□□□□□ -0.76
SNX1-201ENST00000261889 HIGD1AQ9Y241 93 aa10.29□□□□□ -0.76
SNX1-201ENST00000261889 LINC00312Q9Y6C7 94 aa10.29□□□□□ -0.76
SNX1-201ENST00000261889 NDUFB3O43676 98 aa10.29□□□□□ -0.76
SNX1-201ENST00000261889 SUB1P53999 127 aaKnown RBP eCLIP10.29□□□□□ -0.76
SNX1-201ENST00000261889 FAM231DQ6ZW35 169 aa10.29□□□□□ -0.76
SNX1-201ENST00000261889 MRPL52Q86TS9 123 aaKnown RBP10.29□□□□□ -0.76
SNX1-201ENST00000261889 PIP4P2Q8N4L2 257 aa10.29□□□□□ -0.76
SNX1-201ENST00000261889 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.29□□□□□ -0.76
SNX1-201ENST00000261889 WIPF2Q8TF74 440 aaPredicted RBP10.29□□□□□ -0.76
SNX1-201ENST00000261889 DYNLRB1Q9NP97 96 aa10.29□□□□□ -0.76
SNX1-201ENST00000261889 AGRNO00468 2067 aa10.29□□□□□ -0.76
SNX1-201ENST00000261889 PPIAL4EA0A075B759 164 aa10.28□□□□□ -0.76
SNX1-201ENST00000261889 LTAP01374 205 aa10.28□□□□□ -0.76
SNX1-201ENST00000261889 PPIAL4FP0DN26 164 aa10.28□□□□□ -0.76
SNX1-201ENST00000261889 VMA21Q3ZAQ7 101 aa10.28□□□□□ -0.76
SNX1-201ENST00000261889 TMEM167AQ8TBQ9 72 aa10.28□□□□□ -0.76
SNX1-201ENST00000261889 C19orf71A6NCJ1 209 aa10.28□□□□□ -0.76
SNX1-201ENST00000261889 GAGE10A6NGK3 116 aa10.28□□□□□ -0.76
SNX1-201ENST00000261889 NPIPB5A8MRT5 1133 aa10.28□□□□□ -0.76
SNX1-201ENST00000261889 IGLV2-11P01706 119 aa10.28□□□□□ -0.76
SNX1-201ENST00000261889 CDKN1BP46527 198 aa10.28□□□□□ -0.76
SNX1-201ENST00000261889 HES1Q14469 280 aa10.28□□□□□ -0.76
SNX1-201ENST00000261889 COX19Q49B96 90 aa10.28□□□□□ -0.76
SNX1-201ENST00000261889 SFTA2Q6UW10 78 aa10.28□□□□□ -0.76
SNX1-201ENST00000261889 LYZL1Q6UWQ5 148 aa10.28□□□□□ -0.76
SNX1-201ENST00000261889 DEFB125Q8N687 156 aa10.28□□□□□ -0.76
SNX1-201ENST00000261889 C1orf162Q8NEQ5 155 aaPredicted RBP10.28□□□□□ -0.76
SNX1-201ENST00000261889 IGLV3-9A0A075B6K5 115 aa10.28□□□□□ -0.76
SNX1-201ENST00000261889 KLRD1Q13241 179 aa10.28□□□□□ -0.76
SNX1-201ENST00000261889 PRR30Q53SZ7 412 aaPredicted RBP10.28□□□□□ -0.76
SNX1-201ENST00000261889 Q6ZQT7 251 aa10.28□□□□□ -0.76
SNX1-201ENST00000261889 TMEM186Q96B77 213 aa10.28□□□□□ -0.76
SNX1-201ENST00000261889 RASL11BQ9BPW5 248 aa10.28□□□□□ -0.76
SNX1-201ENST00000261889 INSIG2Q9Y5U4 225 aa10.28□□□□□ -0.76
SNX1-201ENST00000261889 TRAV30A0A087WSZ9 112 aa10.27□□□□□ -0.77
SNX1-201ENST00000261889 A0A1B0GUT8 65 aa10.27□□□□□ -0.77
SNX1-201ENST00000261889 SAPCD1Q5SSQ6 148 aa10.27□□□□□ -0.77
SNX1-201ENST00000261889 LIPFP07098 398 aa10.27□□□□□ -0.77
SNX1-201ENST00000261889 LOXP28300 417 aaPredicted RBP10.27□□□□□ -0.77
SNX1-201ENST00000261889 IGFL3Q6UXB1 125 aa10.27□□□□□ -0.77
SNX1-201ENST00000261889 PRSS22Q9GZN4 317 aa10.27□□□□□ -0.77
SNX1-201ENST00000261889 ST20Q9HBF5 79 aa10.27□□□□□ -0.77
SNX1-201ENST00000261889 C17orf100A8MU93 164 aa10.26□□□□□ -0.77
SNX1-201ENST00000261889 K7ENP7 123 aa10.26□□□□□ -0.77
SNX1-201ENST00000261889 ZNF747Q9BV97 191 aa10.26□□□□□ -0.77
SNX1-201ENST00000261889 SETD2Q9BYW2 2564 aaPredicted RBP10.26□□□□□ -0.77
SNX1-201ENST00000261889 A0A096LNJ9 63 aa10.26□□□□□ -0.77
SNX1-201ENST00000261889 C19orf24Q9BVV8 132 aa10.26□□□□□ -0.77
SNX1-201ENST00000261889 CELSR2Q9HCU4 2923 aa10.26□□□□□ -0.77
SNX1-201ENST00000261889 AP1S3Q96PC3 154 aa10.26□□□□□ -0.77
SNX1-201ENST00000261889 SIGLEC8Q9NYZ4 499 aa10.26□□□□□ -0.77
SNX1-201ENST00000261889 IGKV1-17P01599 117 aa10.25□□□□□ -0.77
SNX1-201ENST00000261889 GCSHP23434 173 aa10.25□□□□□ -0.77
SNX1-201ENST00000261889 RPL24P83731 157 aaKnown RBP10.25□□□□□ -0.77
SNX1-201ENST00000261889 MEF2CQ06413 473 aaPredicted RBP10.25□□□□□ -0.77
SNX1-201ENST00000261889 S100A7AQ86SG5 101 aa10.25□□□□□ -0.77
SNX1-201ENST00000261889 ONECUT1Q9UBC0 465 aa10.25□□□□□ -0.77
SNX1-201ENST00000261889 KIR3DS1Q14943 382 aa10.25□□□□□ -0.77
SNX1-201ENST00000261889 TMEM97Q5BJF2 176 aa10.25□□□□□ -0.77
SNX1-201ENST00000261889 PSG8Q9UQ74 426 aa10.25□□□□□ -0.77
SNX1-201ENST00000261889 IGLC1P0CG04 106 aa10.25□□□□□ -0.77
SNX1-201ENST00000261889 TWIST1Q15672 202 aa10.25□□□□□ -0.77
SNX1-201ENST00000261889 SIGLEC9Q9Y336 463 aa10.25□□□□□ -0.77
SNX1-201ENST00000261889 C2CD3Q4AC94 2353 aa10.24□□□□□ -0.77
SNX1-201ENST00000261889 NPYP01303 97 aa10.24□□□□□ -0.77
SNX1-201ENST00000261889 IGHV1-8P0DP01 117 aa10.24□□□□□ -0.77
SNX1-201ENST00000261889 FMC1Q96HJ9 113 aa10.24□□□□□ -0.77
SNX1-201ENST00000261889 IGKV2D-26A0A0A0MRZ7 120 aa10.24□□□□□ -0.77
SNX1-201ENST00000261889 C12orf54Q6X4T0 127 aa10.24□□□□□ -0.77
SNX1-201ENST00000261889 PPP1R27Q86WC6 154 aa10.24□□□□□ -0.77
SNX1-201ENST00000261889 C8orf46Q8TAG6 207 aa10.24□□□□□ -0.77
SNX1-201ENST00000261889 TRAV26-2A0A0B4J265 109 aa10.23□□□□□ -0.77
SNX1-201ENST00000261889 TMEM178BH3BS89 294 aa10.23□□□□□ -0.77
SNX1-201ENST00000261889 ERCC8Q13216 396 aa10.23□□□□□ -0.77
SNX1-201ENST00000261889 PRELID3AQ96N28 172 aa10.23□□□□□ -0.77
SNX1-201ENST00000261889 KLK15Q9H2R5 256 aa10.23□□□□□ -0.77
SNX1-201ENST00000261889 ITGB1BP1O14713 200 aa10.23□□□□□ -0.77
SNX1-201ENST00000261889 ATP5L2Q7Z4Y8 100 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms