RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 IGFL3Q6UXB1 125 aa2.6□□□□□ -1.99
CCDC54-201ENST00000261058 TRAPPC6BQ86SZ2 158 aa2.6□□□□□ -1.99
CCDC54-201ENST00000261058 C1orf174Q8IYL3 243 aa2.6□□□□□ -1.99
CCDC54-201ENST00000261058 OR2T10Q8NGZ9 312 aa2.6□□□□□ -1.99
CCDC54-201ENST00000261058 GNPNAT1Q96EK6 184 aaPredicted RBP2.6□□□□□ -1.99
CCDC54-201ENST00000261058 TM2D3Q9BRN9 247 aa2.6□□□□□ -1.99
CCDC54-201ENST00000261058 AGPAT4-IT1Q9H0P7 198 aa2.6□□□□□ -1.99
CCDC54-201ENST00000261058 C21orf62Q9NYP8 219 aa2.6□□□□□ -1.99
CCDC54-201ENST00000261058 LAMB4A4D0S4 1761 aa2.6□□□□□ -1.99
CCDC54-201ENST00000261058 CHD3Q12873 2000 aaKnown RBP2.6□□□□□ -1.99
CCDC54-201ENST00000261058 ABCA8O94911 1581 aa2.6□□□□□ -1.99
CCDC54-201ENST00000261058 SETBP1Q9Y6X0 1596 aa2.6□□□□□ -1.99
CCDC54-201ENST00000261058 TARBP1Q13395 1621 aaKnown RBP2.6□□□□□ -1.99
CCDC54-201ENST00000261058 RBBP6Q7Z6E9 1792 aaKnown RBP2.6□□□□□ -1.99
CCDC54-201ENST00000261058 ADAMTSL1Q8N6G6 1762 aa2.6□□□□□ -1.99
CCDC54-201ENST00000261058 ADGRB3O60242 1522 aa2.6□□□□□ -1.99
CCDC54-201ENST00000261058 KIF1AQ12756 1690 aa2.59□□□□□ -1.99
CCDC54-201ENST00000261058 IGLV1-50A0A075B6I6 118 aa2.59□□□□□ -1.99
CCDC54-201ENST00000261058 TRBV24-1A0A075B6N3 115 aa2.59□□□□□ -1.99
CCDC54-201ENST00000261058 TRAV12-2A0A075B6T6 113 aa2.59□□□□□ -1.99
CCDC54-201ENST00000261058 IRGMA1A4Y4 181 aa2.59□□□□□ -1.99
CCDC54-201ENST00000261058 ZNF727A8MUV8 499 aa2.59□□□□□ -1.99
CCDC54-201ENST00000261058 SLC25A5P05141 298 aaKnown RBP2.59□□□□□ -1.99
CCDC54-201ENST00000261058 ZNF345Q14585 488 aa2.59□□□□□ -1.99
CCDC54-201ENST00000261058 ELOCQ15369 112 aa2.59□□□□□ -1.99
CCDC54-201ENST00000261058 PMCHL1Q16048 86 aa2.59□□□□□ -1.99
CCDC54-201ENST00000261058 SPATA45Q537H7 98 aa2.59□□□□□ -1.99
CCDC54-201ENST00000261058 BVES-AS1Q5T3Y7 98 aa2.59□□□□□ -1.99
CCDC54-201ENST00000261058 LINC01545Q5VT33 79 aa2.59□□□□□ -1.99
CCDC54-201ENST00000261058 C1orf140Q5VVS0 124 aa2.59□□□□□ -1.99
CCDC54-201ENST00000261058 LINC00305Q7Z4B0 112 aa2.59□□□□□ -1.99
CCDC54-201ENST00000261058 WDR86Q86TI4 376 aa2.59□□□□□ -1.99
CCDC54-201ENST00000261058 SLC22A24Q8N4F4 322 aa2.59□□□□□ -1.99
CCDC54-201ENST00000261058 ZNF709Q8N972 641 aa2.59□□□□□ -1.99
CCDC54-201ENST00000261058 OR5H2Q8NGV7 314 aa2.59□□□□□ -1.99
CCDC54-201ENST00000261058 OR10AG1Q8NH19 301 aa2.59□□□□□ -1.99
CCDC54-201ENST00000261058 UBALD1Q8TB05 177 aa2.59□□□□□ -1.99
CCDC54-201ENST00000261058 BRK1Q8WUW1 75 aa2.59□□□□□ -1.99
CCDC54-201ENST00000261058 C2orf50Q96LR7 162 aa2.59□□□□□ -1.99
CCDC54-201ENST00000261058 CAMK2N2Q96S95 79 aa2.59□□□□□ -1.99
CCDC54-201ENST00000261058 TXNL4BQ9NX01 149 aaKnown RBP2.59□□□□□ -1.99
CCDC54-201ENST00000261058 NDUFB11Q9NX14 153 aa2.59□□□□□ -1.99
CCDC54-201ENST00000261058 TAC3Q9UHF0 121 aa2.59□□□□□ -1.99
CCDC54-201ENST00000261058 V9GYH0 126 aa2.59□□□□□ -1.99
CCDC54-201ENST00000261058 IQGAP2Q13576 1575 aa2.59□□□□□ -1.99
CCDC54-201ENST00000261058 ABCA6Q8N139 1617 aa2.59□□□□□ -1.99
CCDC54-201ENST00000261058 EFCAB5A4FU69 1503 aa2.59□□□□□ -2
CCDC54-201ENST00000261058 ARHGAP5Q13017 1502 aa2.59□□□□□ -2
CCDC54-201ENST00000261058 TRBV20-1A0A075B6N2 111 aa2.59□□□□□ -2
CCDC54-201ENST00000261058 IGHV1-45A0A0A0MS14 117 aa2.59□□□□□ -2
CCDC54-201ENST00000261058 IGHV1-58A0A0C4DH39 117 aa2.59□□□□□ -2
CCDC54-201ENST00000261058 A0A0J9YW62 118 aa2.59□□□□□ -2
CCDC54-201ENST00000261058 IGHV5-10-1A0A0J9YXX1 117 aa2.59□□□□□ -2
CCDC54-201ENST00000261058 KANTRA0A1W2PQU2 76 aa2.59□□□□□ -2
CCDC54-201ENST00000261058 H3BMG7 143 aa2.59□□□□□ -2
CCDC54-201ENST00000261058 M0R381 172 aa2.59□□□□□ -2
CCDC54-201ENST00000261058 UBE2L6O14933 153 aa2.59□□□□□ -2
CCDC54-201ENST00000261058 NDUFB2O95178 105 aa2.59□□□□□ -2
CCDC54-201ENST00000261058 LTAP01374 205 aa2.59□□□□□ -2
CCDC54-201ENST00000261058 LINC00869P0C866 280 aa2.59□□□□□ -2
CCDC54-201ENST00000261058 IGHV1-8P0DP01 117 aa2.59□□□□□ -2
CCDC54-201ENST00000261058 SLC25A4P12235 298 aa2.59□□□□□ -2
CCDC54-201ENST00000261058 ELOBQ15370 118 aa2.59□□□□□ -2
CCDC54-201ENST00000261058 DPPA3Q6W0C5 159 aa2.59□□□□□ -2
CCDC54-201ENST00000261058 Q6ZS49 121 aa2.59□□□□□ -2
CCDC54-201ENST00000261058 KTN1-AS1Q86SY8 53 aa2.59□□□□□ -2
CCDC54-201ENST00000261058 LINC00311Q8N616 119 aa2.59□□□□□ -2
CCDC54-201ENST00000261058 RNF182Q8N6D2 247 aa2.59□□□□□ -2
CCDC54-201ENST00000261058 SLC25A29Q8N8R3 303 aa2.59□□□□□ -2
CCDC54-201ENST00000261058 OR10P1Q8NGE3 313 aa2.59□□□□□ -2
CCDC54-201ENST00000261058 FAM57AQ8TBR7 257 aa2.59□□□□□ -2
CCDC54-201ENST00000261058 ABHD14BQ96IU4 210 aa2.59□□□□□ -2
CCDC54-201ENST00000261058 CCL13Q99616 98 aa2.59□□□□□ -2
CCDC54-201ENST00000261058 PMCHL2Q9BQD1 86 aa2.59□□□□□ -2
CCDC54-201ENST00000261058 CKLFQ9UBR5 152 aa2.59□□□□□ -2
CCDC54-201ENST00000261058 SPCS1Q9Y6A9 102 aa2.59□□□□□ -2
CCDC54-201ENST00000261058 TCHHQ07283 1943 aa2.58□□□□□ -2
CCDC54-201ENST00000261058 RNF17Q9BXT8 1623 aaKnown RBP2.58□□□□□ -2
CCDC54-201ENST00000261058 DSPPQ9NZW4 1301 aa2.58□□□□□ -2
CCDC54-201ENST00000261058 ITSN2Q9NZM3 1697 aa2.58□□□□□ -2
CCDC54-201ENST00000261058 NUP210LQ5VU65 1888 aa2.58□□□□□ -2
CCDC54-201ENST00000261058 IGHV1OR15-9A0A0B4J2B8 117 aa2.58□□□□□ -2
CCDC54-201ENST00000261058 A0A0G2JND7 137 aa2.58□□□□□ -2
CCDC54-201ENST00000261058 LOC107986453A0A1B0GWG9 222 aa2.58□□□□□ -2
CCDC54-201ENST00000261058 A0A1W2PPM0 123 aa2.58□□□□□ -2
CCDC54-201ENST00000261058 FAM24AA6NFZ4 105 aa2.58□□□□□ -2
CCDC54-201ENST00000261058 OOSP1A8MZH6 123 aa2.58□□□□□ -2
CCDC54-201ENST00000261058 NDUFB3O43676 98 aa2.58□□□□□ -2
CCDC54-201ENST00000261058 CST7O76096 145 aa2.58□□□□□ -2
CCDC54-201ENST00000261058 IGHV3-11P01762 117 aa2.58□□□□□ -2
CCDC54-201ENST00000261058 CISD3P0C7P0 127 aa2.58□□□□□ -2
CCDC54-201ENST00000261058 INSL3P51460 131 aa2.58□□□□□ -2
CCDC54-201ENST00000261058 LINC00313P59037 77 aa2.58□□□□□ -2
CCDC54-201ENST00000261058 TAS2R45P59539 299 aa2.58□□□□□ -2
CCDC54-201ENST00000261058 CEMP1Q6PRD7 247 aaPredicted RBP2.58□□□□□ -2
CCDC54-201ENST00000261058 NTM-AS1Q6ZSK4 140 aa2.58□□□□□ -2
CCDC54-201ENST00000261058 COMMD6Q7Z4G1 85 aa2.58□□□□□ -2
CCDC54-201ENST00000261058 RBMXL1Q96E39 390 aaKnown RBP2.58□□□□□ -2
CCDC54-201ENST00000261058 FAM60AQ9NP50 221 aa2.58□□□□□ -2
CCDC54-201ENST00000261058 ZNF492Q9P255 531 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms