RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 SERP1Q9Y6X1 66 aa6.11□□□□□ -1.43
GPNMB-201ENST00000258733 A0A0A6YYD4 124 aa6.1□□□□□ -1.43
GPNMB-201ENST00000258733 SCRG1O75711 98 aa6.1□□□□□ -1.43
GPNMB-201ENST00000258733 VPREB1P12018 145 aa6.1□□□□□ -1.43
GPNMB-201ENST00000258733 CD40P25942 277 aa6.1□□□□□ -1.43
GPNMB-201ENST00000258733 FCER1GP30273 86 aa6.1□□□□□ -1.43
GPNMB-201ENST00000258733 APOC4P55056 127 aa6.1□□□□□ -1.43
GPNMB-201ENST00000258733 SFTA2Q6UW10 78 aa6.1□□□□□ -1.43
GPNMB-201ENST00000258733 FAM90A1Q86YD7 464 aa6.1□□□□□ -1.43
GPNMB-201ENST00000258733 OR5AS1Q8N127 324 aa6.1□□□□□ -1.43
GPNMB-201ENST00000258733 OR8A1Q8NGG7 326 aa6.1□□□□□ -1.43
GPNMB-201ENST00000258733 HIST1H4GQ99525 98 aa6.1□□□□□ -1.43
GPNMB-201ENST00000258733 TTTY13Q9BZ97 58 aa6.1□□□□□ -1.43
GPNMB-201ENST00000258733 LIME1Q9H400 295 aa6.1□□□□□ -1.43
GPNMB-201ENST00000258733 TET1Q8NFU7 2136 aa6.1□□□□□ -1.43
GPNMB-201ENST00000258733 UBE2L5PA0A1B0GUS4 154 aa6.1□□□□□ -1.43
GPNMB-201ENST00000258733 TMEM14DPA8MWL7 114 aa6.1□□□□□ -1.43
GPNMB-201ENST00000258733 PAX4O43316 350 aa6.1□□□□□ -1.43
GPNMB-201ENST00000258733 SYNGR2O43760 224 aa6.1□□□□□ -1.43
GPNMB-201ENST00000258733 ZNF823P16415 610 aa6.1□□□□□ -1.43
GPNMB-201ENST00000258733 COL8A2P25067 703 aa6.1□□□□□ -1.43
GPNMB-201ENST00000258733 CACNG7P62955 275 aa6.1□□□□□ -1.43
GPNMB-201ENST00000258733 UBE2L3P68036 154 aaKnown RBP6.1□□□□□ -1.43
GPNMB-201ENST00000258733 LINC01590Q5TEZ4 76 aa6.1□□□□□ -1.43
GPNMB-201ENST00000258733 PDPNQ86YL7 162 aa6.1□□□□□ -1.43
GPNMB-201ENST00000258733 SLC22A24Q8N4F4 322 aa6.1□□□□□ -1.43
GPNMB-201ENST00000258733 FMC1Q96HJ9 113 aa6.1□□□□□ -1.43
GPNMB-201ENST00000258733 ARHGAP5-AS1Q96IT6 56 aa6.1□□□□□ -1.43
GPNMB-201ENST00000258733 UPK3BQ9BT76 320 aa6.1□□□□□ -1.43
GPNMB-201ENST00000258733 CFHR1Q03591 330 aa6.09□□□□□ -1.43
GPNMB-201ENST00000258733 ESPL1Q14674 2120 aa6.09□□□□□ -1.43
GPNMB-201ENST00000258733 CD164L2Q6UWJ8 174 aa6.09□□□□□ -1.43
GPNMB-201ENST00000258733 FP248Q71RG6 208 aaPredicted RBP6.09□□□□□ -1.43
GPNMB-201ENST00000258733 ZNF799Q96GE5 643 aa6.09□□□□□ -1.43
GPNMB-201ENST00000258733 A0A087WWL8 130 aa6.09□□□□□ -1.43
GPNMB-201ENST00000258733 IGKV2D-26A0A0A0MRZ7 120 aa6.09□□□□□ -1.43
GPNMB-201ENST00000258733 TEX49A0A1B0GTD5 131 aa6.09□□□□□ -1.43
GPNMB-201ENST00000258733 LINC01549A6NIU2 74 aa6.09□□□□□ -1.43
GPNMB-201ENST00000258733 NDUFC2-KCTD14E9PQ53 114 aa6.09□□□□□ -1.43
GPNMB-201ENST00000258733 HOXD3P31249 432 aaPredicted RBP6.09□□□□□ -1.43
GPNMB-201ENST00000258733 SRYQ05066 204 aa6.09□□□□□ -1.43
GPNMB-201ENST00000258733 CNRIP1Q96F85 164 aaPredicted RBP6.09□□□□□ -1.43
GPNMB-201ENST00000258733 HDHD3Q9BSH5 251 aaPredicted RBP6.09□□□□□ -1.43
GPNMB-201ENST00000258733 CALYQ9NYX4 217 aa6.09□□□□□ -1.43
GPNMB-201ENST00000258733 SPAG17Q6Q759 2223 aa6.09□□□□□ -1.43
GPNMB-201ENST00000258733 MYO7BQ6PIF6 2116 aa6.09□□□□□ -1.43
GPNMB-201ENST00000258733 FREM3P0C091 2139 aa6.09□□□□□ -1.44
GPNMB-201ENST00000258733 SRSF10O75494 262 aaKnown RBP6.08□□□□□ -1.44
GPNMB-201ENST00000258733 ADIGQ0VDE8 80 aa6.08□□□□□ -1.44
GPNMB-201ENST00000258733 Q6ZR03 302 aa6.08□□□□□ -1.44
GPNMB-201ENST00000258733 MGST2Q99735 147 aa6.08□□□□□ -1.44
GPNMB-201ENST00000258733 AICDAQ9GZX7 198 aa6.08□□□□□ -1.44
GPNMB-201ENST00000258733 INS-IGF2F8WCM5 200 aa6.08□□□□□ -1.44
GPNMB-201ENST00000258733 NGFP01138 241 aa6.08□□□□□ -1.44
GPNMB-201ENST00000258733 ZNF138P52744 262 aa6.08□□□□□ -1.44
GPNMB-201ENST00000258733 ASPHD1Q5U4P2 390 aa6.08□□□□□ -1.44
GPNMB-201ENST00000258733 ZNF503Q96F45 646 aa6.08□□□□□ -1.44
GPNMB-201ENST00000258733 AAMDCQ9H7C9 122 aa6.08□□□□□ -1.44
GPNMB-201ENST00000258733 LHFPL6Q9Y693 200 aa6.08□□□□□ -1.44
GPNMB-201ENST00000258733 CACNA1DQ01668 2161 aa6.08□□□□□ -1.44
GPNMB-201ENST00000258733 C2orf16Q68DN1 1984 aa6.08□□□□□ -1.44
GPNMB-201ENST00000258733 NSUN5P1Q3KNT7 163 aa6.08□□□□□ -1.44
GPNMB-201ENST00000258733 PRR15Q8IV56 129 aa6.08□□□□□ -1.44
GPNMB-201ENST00000258733 ZNF295-AS1Q8N0V1 137 aa6.08□□□□□ -1.44
GPNMB-201ENST00000258733 ZNF414Q96IQ9 312 aa6.08□□□□□ -1.44
GPNMB-201ENST00000258733 CABIN1Q9Y6J0 2220 aa6.07□□□□□ -1.44
GPNMB-201ENST00000258733 TRBV7-3A0A075B6L6 115 aa6.07□□□□□ -1.44
GPNMB-201ENST00000258733 IGKV1D-8A0A087WSZ0 117 aa6.07□□□□□ -1.44
GPNMB-201ENST00000258733 H3BMM0 161 aa6.07□□□□□ -1.44
GPNMB-201ENST00000258733 M0QZQ0 153 aa6.07□□□□□ -1.44
GPNMB-201ENST00000258733 MRPS12O15235 138 aaKnown RBP6.07□□□□□ -1.44
GPNMB-201ENST00000258733 FXYD4P59646 89 aa6.07□□□□□ -1.44
GPNMB-201ENST00000258733 CCL8P80075 99 aa6.07□□□□□ -1.44
GPNMB-201ENST00000258733 CENPWQ5EE01 88 aa6.07□□□□□ -1.44
GPNMB-201ENST00000258733 C11orf52Q96A22 123 aa6.07□□□□□ -1.44
GPNMB-201ENST00000258733 UBE2WQ96B02 151 aa6.07□□□□□ -1.44
GPNMB-201ENST00000258733 LINC01553A4QN01 128 aa6.07□□□□□ -1.44
GPNMB-201ENST00000258733 DEFA4P12838 97 aa6.07□□□□□ -1.44
GPNMB-201ENST00000258733 PRR20EP86478 221 aa6.07□□□□□ -1.44
GPNMB-201ENST00000258733 PRR20CP86479 221 aa6.07□□□□□ -1.44
GPNMB-201ENST00000258733 PRR20DP86480 221 aa6.07□□□□□ -1.44
GPNMB-201ENST00000258733 PRR20BP86481 221 aa6.07□□□□□ -1.44
GPNMB-201ENST00000258733 PRR20AP86496 221 aa6.07□□□□□ -1.44
GPNMB-201ENST00000258733 ATP5L2Q7Z4Y8 100 aa6.07□□□□□ -1.44
GPNMB-201ENST00000258733 NABP2Q9BQ15 211 aa6.07□□□□□ -1.44
GPNMB-201ENST00000258733 RBM12B-AS1Q9P1G2 102 aa6.07□□□□□ -1.44
GPNMB-201ENST00000258733 COL4A6Q14031 1691 aa6.06□□□□□ -1.44
GPNMB-201ENST00000258733 KNCNA6PVL3 124 aa6.06□□□□□ -1.44
GPNMB-201ENST00000258733 K7EMT4 169 aa6.06□□□□□ -1.44
GPNMB-201ENST00000258733 M0R1B8 84 aa6.06□□□□□ -1.44
GPNMB-201ENST00000258733 FOXF2Q12947 444 aa6.06□□□□□ -1.44
GPNMB-201ENST00000258733 SS18Q15532 418 aa6.06□□□□□ -1.44
GPNMB-201ENST00000258733 CD177Q8N6Q3 437 aa6.06□□□□□ -1.44
GPNMB-201ENST00000258733 SERP2Q8N6R1 65 aa6.06□□□□□ -1.44
GPNMB-201ENST00000258733 PRR26Q8N8Z3 221 aa6.06□□□□□ -1.44
GPNMB-201ENST00000258733 NT5CQ8TCD5 201 aa6.06□□□□□ -1.44
GPNMB-201ENST00000258733 TMEM14AQ9Y6G1 99 aa6.06□□□□□ -1.44
GPNMB-201ENST00000258733 C17orf100A8MU93 164 aa6.06□□□□□ -1.44
GPNMB-201ENST00000258733 CXCL5P42830 114 aa6.06□□□□□ -1.44
GPNMB-201ENST00000258733 HIST1H4AP62805 103 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms