RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 ACACAQ13085 2346 aa10.66□□□□□ -0.7
PRPF38A-201ENST00000257181 IGHV3OR16-8A0A075B7F1 116 aa10.66□□□□□ -0.7
PRPF38A-201ENST00000257181 TRAV2A0A0B4J234 112 aa10.65□□□□□ -0.7
PRPF38A-201ENST00000257181 ZNF256Q9Y2P7 627 aaPredicted RBP10.65□□□□□ -0.7
PRPF38A-201ENST00000257181 EP300Q09472 2414 aaPredicted RBP10.65□□□□□ -0.7
PRPF38A-201ENST00000257181 LY6G6DO95868 133 aa10.65□□□□□ -0.7
PRPF38A-201ENST00000257181 IGKV1-16P04430 117 aa10.65□□□□□ -0.7
PRPF38A-201ENST00000257181 Q6ZWC4 215 aa10.65□□□□□ -0.7
PRPF38A-201ENST00000257181 MGST2Q99735 147 aa10.65□□□□□ -0.7
PRPF38A-201ENST00000257181 RARRES2Q99969 163 aa10.65□□□□□ -0.7
PRPF38A-201ENST00000257181 ZNF492Q9P255 531 aa10.65□□□□□ -0.7
PRPF38A-201ENST00000257181 IGKV1D-8A0A087WSZ0 117 aa10.65□□□□□ -0.7
PRPF38A-201ENST00000257181 G3V318 75 aa10.65□□□□□ -0.7
PRPF38A-201ENST00000257181 NDUFS7O75251 213 aa10.65□□□□□ -0.7
PRPF38A-201ENST00000257181 AZU1P20160 251 aa10.65□□□□□ -0.7
PRPF38A-201ENST00000257181 SCO2A0A1W2PP80 73 aa10.65□□□□□ -0.7
PRPF38A-201ENST00000257181 INS-IGF2F8WCM5 200 aa10.65□□□□□ -0.7
PRPF38A-201ENST00000257181 TCTAP57738 103 aa10.65□□□□□ -0.7
PRPF38A-201ENST00000257181 C11orf71Q6IPW1 123 aa10.65□□□□□ -0.7
PRPF38A-201ENST00000257181 VWC2Q2TAL6 325 aa10.64□□□□□ -0.71
PRPF38A-201ENST00000257181 ZNF48Q96MX3 618 aaPredicted RBP10.64□□□□□ -0.71
PRPF38A-201ENST00000257181 ATP5G1P05496 136 aa10.64□□□□□ -0.71
PRPF38A-201ENST00000257181 ATP5G3P48201 142 aa10.64□□□□□ -0.71
PRPF38A-201ENST00000257181 LMO4P61968 165 aa10.64□□□□□ -0.71
PRPF38A-201ENST00000257181 LY6G5BQ8NDX9 201 aa10.64□□□□□ -0.71
PRPF38A-201ENST00000257181 MRAPQ8TCY5 172 aa10.64□□□□□ -0.71
PRPF38A-201ENST00000257181 MUC22E2RYF6 1773 aaPredicted RBP10.64□□□□□ -0.71
PRPF38A-201ENST00000257181 DNAL4O96015 105 aa10.64□□□□□ -0.71
PRPF38A-201ENST00000257181 GATA2P23769 480 aaPredicted RBP10.64□□□□□ -0.71
PRPF38A-201ENST00000257181 SFTA2Q6UW10 78 aa10.64□□□□□ -0.71
PRPF38A-201ENST00000257181 CSTL1Q9H114 145 aa10.64□□□□□ -0.71
PRPF38A-201ENST00000257181 ICOSQ9Y6W8 199 aa10.64□□□□□ -0.71
PRPF38A-201ENST00000257181 ASXL3Q9C0F0 2248 aa10.64□□□□□ -0.71
PRPF38A-201ENST00000257181 A0A1B0GVG6 124 aa10.64□□□□□ -0.71
PRPF38A-201ENST00000257181 GGTLC3B5MD39 225 aa10.64□□□□□ -0.71
PRPF38A-201ENST00000257181 APC2O95996 2303 aa10.64□□□□□ -0.71
PRPF38A-201ENST00000257181 NTF4P34130 210 aa10.64□□□□□ -0.71
PRPF38A-201ENST00000257181 NDPQ00604 133 aa10.64□□□□□ -0.71
PRPF38A-201ENST00000257181 ZNF414Q96IQ9 312 aa10.64□□□□□ -0.71
PRPF38A-201ENST00000257181 GRIFINA4D1Z8 144 aa10.63□□□□□ -0.71
PRPF38A-201ENST00000257181 SMIM9A6NGZ8 99 aa10.63□□□□□ -0.71
PRPF38A-201ENST00000257181 NDUFA3O95167 84 aa10.63□□□□□ -0.71
PRPF38A-201ENST00000257181 HILS1P60008 231 aa10.63□□□□□ -0.71
PRPF38A-201ENST00000257181 MRPL23Q16540 153 aaKnown RBP10.63□□□□□ -0.71
PRPF38A-201ENST00000257181 PDZD11Q5EBL8 140 aa10.63□□□□□ -0.71
PRPF38A-201ENST00000257181 GTF2H5Q6ZYL4 71 aa10.63□□□□□ -0.71
PRPF38A-201ENST00000257181 DCAF16Q9NXF7 216 aa10.63□□□□□ -0.71
PRPF38A-201ENST00000257181 SVILO95425 2214 aa10.63□□□□□ -0.71
PRPF38A-201ENST00000257181 TRAV5A0A0B4J249 113 aa10.63□□□□□ -0.71
PRPF38A-201ENST00000257181 DEFB130BP0DP73 79 aa10.63□□□□□ -0.71
PRPF38A-201ENST00000257181 DEFB130AP0DP74 79 aa10.63□□□□□ -0.71
PRPF38A-201ENST00000257181 C8orf86Q6ZUL3 223 aa10.63□□□□□ -0.71
PRPF38A-201ENST00000257181 PYYP10082 97 aa10.63□□□□□ -0.71
PRPF38A-201ENST00000257181 PLEKHB2Q96CS7 222 aa10.63□□□□□ -0.71
PRPF38A-201ENST00000257181 CT83Q5H943 113 aa10.63□□□□□ -0.71
PRPF38A-201ENST00000257181 C19orf84I3L1E1 186 aa10.62□□□□□ -0.71
PRPF38A-201ENST00000257181 ZNF134P52741 427 aa10.62□□□□□ -0.71
PRPF38A-201ENST00000257181 C14orf177Q52M58 125 aa10.62□□□□□ -0.71
PRPF38A-201ENST00000257181 TMEM170BQ5T4T1 132 aa10.62□□□□□ -0.71
PRPF38A-201ENST00000257181 TRAV3A0A0B4J244 114 aa10.62□□□□□ -0.71
PRPF38A-201ENST00000257181 CHCHD1Q96BP2 118 aaKnown RBP10.62□□□□□ -0.71
PRPF38A-201ENST00000257181 H3BVH4 76 aa10.62□□□□□ -0.71
PRPF38A-201ENST00000257181 TEX43Q6ZNM6 134 aa10.62□□□□□ -0.71
PRPF38A-201ENST00000257181 RNF182Q8N6D2 247 aa10.62□□□□□ -0.71
PRPF38A-201ENST00000257181 SLC25A2Q9BXI2 301 aa10.62□□□□□ -0.71
PRPF38A-201ENST00000257181 LGALS9O00182 355 aa10.62□□□□□ -0.71
PRPF38A-201ENST00000257181 SNRPCP09234 159 aaKnown RBP10.62□□□□□ -0.71
PRPF38A-201ENST00000257181 RSPO1Q2MKA7 263 aaPredicted RBP10.62□□□□□ -0.71
PRPF38A-201ENST00000257181 XCL2Q9UBD3 114 aa10.62□□□□□ -0.71
PRPF38A-201ENST00000257181 M0R2P5 195 aa10.61□□□□□ -0.71
PRPF38A-201ENST00000257181 DLX4Q92988 240 aaPredicted RBP10.61□□□□□ -0.71
PRPF38A-201ENST00000257181 DNAJC30Q96LL9 226 aa10.61□□□□□ -0.71
PRPF38A-201ENST00000257181 IGKV2-40A0A087WW87 121 aaPredicted RBP10.61□□□□□ -0.71
PRPF38A-201ENST00000257181 PAX4O43316 350 aa10.61□□□□□ -0.71
PRPF38A-201ENST00000257181 IGKV2D-40P01614 121 aaPredicted RBP10.61□□□□□ -0.71
PRPF38A-201ENST00000257181 OR13C6PQ8NH95 151 aa10.61□□□□□ -0.71
PRPF38A-201ENST00000257181 SCN2AQ99250 2005 aa10.61□□□□□ -0.71
PRPF38A-201ENST00000257181 OVOL2Q9BRP0 275 aa10.61□□□□□ -0.71
PRPF38A-201ENST00000257181 TNFRSF6BO95407 300 aa10.61□□□□□ -0.71
PRPF38A-201ENST00000257181 C12orf57Q99622 126 aa10.61□□□□□ -0.71
PRPF38A-201ENST00000257181 ZNF561-AS1K7EIQ3 104 aa10.6□□□□□ -0.71
PRPF38A-201ENST00000257181 SH2D1AO60880 128 aa10.6□□□□□ -0.71
PRPF38A-201ENST00000257181 SRP19P09132 144 aaKnown RBP10.6□□□□□ -0.71
PRPF38A-201ENST00000257181 TRBV19A0A075B6N1 114 aa10.6□□□□□ -0.71
PRPF38A-201ENST00000257181 ODF3BA8MYP8 253 aa10.6□□□□□ -0.71
PRPF38A-201ENST00000257181 INAFM1C9JVW0 142 aa10.6□□□□□ -0.71
PRPF38A-201ENST00000257181 LYL1P12980 280 aa10.6□□□□□ -0.71
PRPF38A-201ENST00000257181 PIFOQ8TCI5 191 aa10.6□□□□□ -0.71
PRPF38A-201ENST00000257181 LINC00574Q9H8X3 128 aa10.6□□□□□ -0.71
PRPF38A-201ENST00000257181 PLXND1Q9Y4D7 1925 aa10.6□□□□□ -0.71
PRPF38A-201ENST00000257181 IGHV7-81A0A0B4J1V7 117 aa10.6□□□□□ -0.71
PRPF38A-201ENST00000257181 WFDC11Q8NEX6 87 aa10.6□□□□□ -0.71
PRPF38A-201ENST00000257181 SPTBP11277 2137 aa10.6□□□□□ -0.71
PRPF38A-201ENST00000257181 ALPK3Q96L96 1907 aa10.6□□□□□ -0.71
PRPF38A-201ENST00000257181 HIGD1CA8MV81 97 aa10.6□□□□□ -0.71
PRPF38A-201ENST00000257181 CRYGCP07315 174 aa10.6□□□□□ -0.71
PRPF38A-201ENST00000257181 LAGE3Q14657 143 aa10.6□□□□□ -0.71
PRPF38A-201ENST00000257181 ZNF106Q9H2Y7 1883 aaKnown RBP10.6□□□□□ -0.71
PRPF38A-201ENST00000257181 HBDP02042 147 aa10.59□□□□□ -0.71
PRPF38A-201ENST00000257181 POLR3KQ9Y2Y1 108 aaPredicted RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms